13 homologs were found in PanDaTox collection
for query gene Cmaq_1935 on replicon NC_009954
Organism: Caldivirga maquilingensis IC-167



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009954  Cmaq_1935  hypothetical protein  100 
 
 
258 aa  493  1e-139  Caldivirga maquilingensis IC-167  Archaea  normal  0.187916  normal 
 
 
-
 
NC_011206  Lferr_2743  rusticyanin  30.86 
 
 
187 aa  77  0.0000000000003  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  unclonable  0.000000000172959  hitchhiker  0.0000000144714 
 
 
-
 
NC_011761  AFE_3146  rusticyanin  30.86 
 
 
187 aa  77  0.0000000000003  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  unclonable  0.000525489  n/a   
 
 
-
 
NC_009954  Cmaq_1483  hypothetical protein  30.11 
 
 
286 aa  73.2  0.000000000004  Caldivirga maquilingensis IC-167  Archaea  normal  normal  0.200109 
 
 
-
 
CP001800  Ssol_2613  blue (type 1) copper domain protein  30.05 
 
 
254 aa  65.9  0.0000000007  Sulfolobus solfataricus 98/2  Archaea  normal  0.658304  n/a   
 
 
-
 
NC_009440  Msed_0966  blue (type1) copper domain-containing protein  29.78 
 
 
251 aa  52.8  0.000005  Metallosphaera sedula DSM 5348  Archaea  hitchhiker  0.000986426  normal  0.363962 
 
 
-
 
NC_010085  Nmar_0185  blue (type1) copper domain-containing protein  35.85 
 
 
315 aa  51.2  0.00002  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal  0.312922 
 
 
-
 
NC_013205  Aaci_2380  hypothetical protein  29.75 
 
 
177 aa  50.8  0.00002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000103477  n/a   
 
 
-
 
NC_011884  Cyan7425_3471  multicopper oxidase type 3  24.14 
 
 
336 aa  44.3  0.002  Cyanothece sp. PCC 7425  Bacteria  normal  0.593576  normal  0.361735 
 
 
-
 
NC_011366  Rleg2_5863  blue (type 1) copper domain protein  26.47 
 
 
159 aa  43.9  0.003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_0759  blue (type1) copper domain-containing protein  28.87 
 
 
287 aa  43.1  0.004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  decreased coverage  0.00521723  n/a   
 
 
-
 
NC_013526  Tter_2149  nitrite reductase, copper-containing  26.61 
 
 
534 aa  42.4  0.007  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2366  blue (type1) copper domain-containing protein  32.67 
 
 
159 aa  42  0.01  Roseiflexus sp. RS-1  Bacteria  normal  0.0881653  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>