More than 300 homologs were found in PanDaTox collection
for query gene Clim_1600 on replicon NC_010803
Organism: Chlorobium limicola DSM 245



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013173  Dbac_2162  MCP methyltransferase/methylesterase, CheR/CheB  60.12 
 
 
879 aa  1044    Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_0327  putative PAS/PAC sensor protein  45.53 
 
 
1008 aa  810    Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_007298  Daro_2045  CheB methylesterase:MCP methyltransferase, CheR-type  57.34 
 
 
868 aa  970    Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4915  PAS  36.89 
 
 
1384 aa  637    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A2183  hypothetical protein  43.99 
 
 
980 aa  754    Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.850093 
 
 
-
 
NC_011060  Ppha_1653  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  69.32 
 
 
993 aa  1424    Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0563  putative PAS/PAC sensor protein  62.82 
 
 
1035 aa  1258    Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0780  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  57.57 
 
 
887 aa  1029    Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1410  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  38.78 
 
 
1120 aa  676    Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.132886  n/a   
 
 
-
 
NC_010625  Bphy_6399  signal transduction histidine kinase with CheB and CheR activity  38.57 
 
 
1361 aa  655    Burkholderia phymatum STM815  Bacteria  normal  0.191888  normal 
 
 
-
 
NC_011832  Mpal_2460  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  55.74 
 
 
971 aa  1004    Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_007908  Rfer_2355  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  45.72 
 
 
1008 aa  767    Rhodoferax ferrireducens T118  Bacteria  normal  0.71741  n/a   
 
 
-
 
NC_007908  Rfer_3013  MCP methyltransferase, CheR-type  55.99 
 
 
877 aa  944    Rhodoferax ferrireducens T118  Bacteria  normal  0.404945  n/a   
 
 
-
 
NC_011060  Ppha_0229  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  70.69 
 
 
1138 aa  1206    Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1118  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  49.06 
 
 
852 aa  808    Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.742809 
 
 
-
 
NC_010803  Clim_1600  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  100 
 
 
1000 aa  2045    Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_1788  putative PAS/PAC sensor protein  65.05 
 
 
998 aa  1310    Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_1840  MCP methyltransferase, CheR-type  54.02 
 
 
840 aa  900    Psychromonas ingrahamii 37  Bacteria  normal  0.59391  normal  0.603716 
 
 
-
 
NC_008709  Ping_2549  fused CheR-type MCP methyltransferase and PAS sensor protein  42.56 
 
 
1006 aa  701    Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_3128  MCP methyltransferase, CheR-type  53.76 
 
 
840 aa  894    Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_5571  signal transduction histidine kinase with CheB and CheR activity  39.63 
 
 
1218 aa  633  1e-180  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.273526  normal 
 
 
-
 
NC_008781  Pnap_1703  signal transduction histidine kinase with CheB and CheR activity  37.79 
 
 
1408 aa  632  1e-179  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.433463  normal 
 
 
-
 
NC_008752  Aave_2417  signal transduction histidine kinase with CheB and CheR activity  37.23 
 
 
1535 aa  632  1e-179  Acidovorax citrulli AAC00-1  Bacteria  normal  0.117494  normal 
 
 
-
 
NC_007413  Ava_0314  Signal transduction histidine kinase (STHK) with CheB and CheR activity  39.02 
 
 
1399 aa  627  1e-178  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_4422  signal transduction histidine kinase with CheB and CheR activity  40.14 
 
 
1274 aa  625  1e-177  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.381764  normal 
 
 
-
 
NC_010580  Bind_3835  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  39.11 
 
 
1167 aa  619  1e-175  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_0707  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  39.32 
 
 
1190 aa  617  1e-175  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_1716  MCP methyltransferase, CheR-type  40.44 
 
 
856 aa  617  1e-175  Halorhodospira halophila SL1  Bacteria  normal  0.92135  n/a   
 
 
-
 
NC_014248  Aazo_2376  signal transduction histidine kinase with CheB and CheR activity  38.03 
 
 
1407 aa  617  1e-175  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_5776  putative PAS/PAC sensor protein  37.54 
 
 
1160 aa  610  1e-173  Sinorhizobium medicae WSM419  Bacteria  normal  0.491611  normal  0.0137055 
 
 
-
 
NC_010322  PputGB1_3018  signal transduction histidine kinase with CheB and CheR activity  37.86 
 
 
1371 aa  598  1e-169  Pseudomonas putida GB-1  Bacteria  normal  normal  0.980757 
 
 
-
 
NC_013037  Dfer_5176  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  36.14 
 
 
1404 aa  598  1e-169  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.190634 
 
 
-
 
NC_007961  Nham_4605  MCP methyltransferase, CheR-type  40.68 
 
 
1092 aa  594  1e-168  Nitrobacter hamburgensis X14  Bacteria  normal  0.315944  n/a   
 
 
-
 
NC_007484  Noc_1601  CheB methylesterase, CheR methyltransferase, hybrid histidine kinase  38.58 
 
 
1222 aa  585  1.0000000000000001e-165  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.472526  n/a   
 
 
-
 
NC_007643  Rru_A1500  Signal transduction histidine kinase (STHK) with CheB and CheR activity  40.75 
 
 
1483 aa  584  1.0000000000000001e-165  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4278  putative PAS/PAC sensor protein  38.93 
 
 
1027 aa  578  1.0000000000000001e-163  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_3193  signal transduction histidine kinase with CheB and CheR activity  36.57 
 
 
1380 aa  575  1.0000000000000001e-162  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.112764 
 
 
-
 
NC_011145  AnaeK_0372  signal transduction histidine kinase with CheB and CheR activity  38.73 
 
 
1233 aa  575  1.0000000000000001e-162  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_3739  MCP methyltransferase, CheR-type  39.29 
 
 
1045 aa  572  1e-161  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0673  signal transduction histidine kinase with CheB and CheR activity  35.2 
 
 
1215 aa  565  1.0000000000000001e-159  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3165  signal transduction histidine kinase with CheB and CheR activity  38.82 
 
 
1306 aa  563  1.0000000000000001e-159  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0370  protein-glutamate O-methyltransferase  46.46 
 
 
639 aa  561  1e-158  Halorhodospira halophila SL1  Bacteria  normal  0.181962  n/a   
 
 
-
 
NC_009467  Acry_3169  signal transduction histidine kinase with CheB and CheR activity  37.4 
 
 
1445 aa  555  1e-156  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_3250  signal transduction histidine kinase with CheB and CheR activity  35.71 
 
 
1348 aa  551  1e-155  Haliangium ochraceum DSM 14365  Bacteria  normal  0.534329  normal  0.0270765 
 
 
-
 
NC_011368  Rleg2_5237  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  36.52 
 
 
1324 aa  551  1e-155  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.395635 
 
 
-
 
NC_007955  Mbur_0399  MCP methyltransferase, CheR-type  36.49 
 
 
820 aa  551  1e-155  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007760  Adeh_3183  signal transduction histidine kinase  37.97 
 
 
1279 aa  546  1e-154  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3046  hypothetical protein  37.56 
 
 
1010 aa  548  1e-154  Saccharophagus degradans 2-40  Bacteria  normal  hitchhiker  0.00164382 
 
 
-
 
NC_011891  A2cp1_3377  signal transduction histidine kinase with CheB and CheR activity  37.85 
 
 
1242 aa  543  1e-153  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_0310  MCP methyltransferase, CheR-type  37.21 
 
 
1149 aa  545  1e-153  Methylobacterium populi BJ001  Bacteria  normal  0.512157  normal 
 
 
-
 
NC_009049  Rsph17029_0905  putative PAS/PAC sensor protein  35.63 
 
 
1170 aa  535  1e-150  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.968727 
 
 
-
 
NC_007493  RSP_2229  methylesterase CheB/methylase CheR  35.63 
 
 
1170 aa  534  1e-150  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.840236  n/a   
 
 
-
 
NC_010510  Mrad2831_6264  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  38.23 
 
 
1163 aa  534  1e-150  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1297  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  36.23 
 
 
1168 aa  524  1e-147  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_7206  signal transduction histidine kinase with CheB and CheR activity  34.88 
 
 
1499 aa  525  1e-147  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6211  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  37.87 
 
 
1061 aa  518  1.0000000000000001e-145  Methylobacterium sp. 4-46  Bacteria  normal  0.820077  normal  0.703655 
 
 
-
 
NC_010505  Mrad2831_4430  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  35.85 
 
 
1158 aa  518  1.0000000000000001e-145  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0521  multi sensor hybrid histidine kinase  35.74 
 
 
1344 aa  516  1e-144  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_3755  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  37.37 
 
 
1063 aa  510  1e-143  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_2264  putative PAS/PAC sensor protein  35.31 
 
 
1165 aa  508  9.999999999999999e-143  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.620072  normal  0.0600346 
 
 
-
 
NC_013440  Hoch_4639  signal transduction histidine kinase with CheB and CheR activity  35.23 
 
 
1453 aa  504  1e-141  Haliangium ochraceum DSM 14365  Bacteria  normal  0.432269  normal 
 
 
-
 
NC_013061  Phep_3913  PAS sensor protein  35.61 
 
 
1337 aa  506  1e-141  Pedobacter heparinus DSM 2366  Bacteria  normal  0.290527  normal  0.28306 
 
 
-
 
NC_013440  Hoch_5252  signal transduction histidine kinase with CheB and CheR activity  34.15 
 
 
1698 aa  501  1e-140  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_12648  Signal Transduction Histidine Kinase (STHK) with CheB and CheRactivity  35.75 
 
 
1200 aa  501  1e-140  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_5709  MCP methyltransferase, CheR-type  36.51 
 
 
853 aa  497  1e-139  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.729466 
 
 
-
 
NC_013440  Hoch_3278  signal transduction histidine kinase with CheB and CheR activity  33.86 
 
 
2468 aa  495  9.999999999999999e-139  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0267066 
 
 
-
 
NC_013440  Hoch_1404  signal transduction histidine kinase with CheB and CheR activity  35.18 
 
 
1759 aa  494  9.999999999999999e-139  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_3102  signal transduction histidine kinase with CheB and CheR activity  35.05 
 
 
1418 aa  488  1e-136  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B1520  signal transduction histidine kinase (STHK) with CheB and CheR activity  34.88 
 
 
1303 aa  482  1e-134  Burkholderia xenovorans LB400  Bacteria  normal  0.124967  normal 
 
 
-
 
NC_008255  CHU_1237  chemotaxis response regulator (methyltransferase)  34.71 
 
 
1618 aa  464  1e-129  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_1028  signal transduction histidine kinase with CheB and CheR activity  34.28 
 
 
1248 aa  460  9.999999999999999e-129  Ruegeria sp. TM1040  Bacteria  normal  normal  0.507304 
 
 
-
 
NC_008751  Dvul_2487  signal transduction histidine kinase with CheB and CheR activity  33.97 
 
 
1535 aa  446  1.0000000000000001e-124  Desulfovibrio vulgaris DP4  Bacteria  normal  0.162467  normal  0.455724 
 
 
-
 
NC_002977  MCA1246  methyltransferase CheR, putative  36.92 
 
 
1378 aa  432  1e-119  Methylococcus capsulatus str. Bath  Bacteria  normal  0.271052  n/a   
 
 
-
 
NC_008576  Mmc1_3390  MCP methyltransferase, CheR-type  40.62 
 
 
617 aa  424  1e-117  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_2975  diguanylate cyclase with PAS/PAC sensor  35.99 
 
 
1084 aa  405  1e-111  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2564  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  32.41 
 
 
1089 aa  401  9.999999999999999e-111  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_2227  MCP methyltransferase, CheR-type  36.01 
 
 
824 aa  403  9.999999999999999e-111  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_0460  MCP methyltransferase, CheR-type  33.22 
 
 
837 aa  398  1e-109  Ruegeria sp. TM1040  Bacteria  normal  0.604812  normal 
 
 
-
 
NC_010508  Bcenmc03_1302  signal transduction histidine kinase with CheB and CheR activity  31.21 
 
 
1220 aa  392  1e-107  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.772751 
 
 
-
 
NC_010086  Bmul_4696  signal transduction histidine kinase with CheB and CheR activity  31.06 
 
 
1214 aa  384  1e-105  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_1989  MCP methyltransferase, CheR-type with PAS/PAC sensor  38.38 
 
 
1110 aa  374  1e-102  Spirosoma linguale DSM 74  Bacteria  normal  0.175442  normal  0.013335 
 
 
-
 
NC_010623  Bphy_5175  MCP methyltransferase, CheR-type  30.46 
 
 
823 aa  376  1e-102  Burkholderia phymatum STM815  Bacteria  normal  normal  0.367936 
 
 
-
 
NC_009622  Smed_6341  putative PAS/PAC sensor protein  38.31 
 
 
629 aa  376  1e-102  Sinorhizobium medicae WSM419  Bacteria  normal  0.433344  normal  0.230755 
 
 
-
 
NC_007348  Reut_B5191  CheB methylesterase:MCP methyltransferase, CheR-type  30.67 
 
 
813 aa  364  4e-99  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0566  MCP methyltransferase, CheR-type with PAS/PAC sensor  34.95 
 
 
1193 aa  362  2e-98  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_3990  MCP methyltransferase, CheR-type  42.96 
 
 
432 aa  342  2.9999999999999998e-92  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_3640  MCP methyltransferase, CheR-type with PAS/PAC sensor  32.79 
 
 
1303 aa  301  3e-80  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.581797 
 
 
-
 
NC_010717  PXO_03023  methyltransferase  35.45 
 
 
604 aa  292  2e-77  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.361036  n/a   
 
 
-
 
NC_013440  Hoch_3427  MCP methyltransferase, CheR-type with PAS/PAC sensor  27.08 
 
 
2031 aa  264  6e-69  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0889636 
 
 
-
 
NC_014248  Aazo_0227  MCP methyltransferase  31.09 
 
 
631 aa  259  1e-67  'Nostoc azollae' 0708  Bacteria  normal  0.993793  n/a   
 
 
-
 
NC_011884  Cyan7425_3121  MCP methyltransferase, CheR-type with PAS/PAC sensor  32.19 
 
 
617 aa  246  9.999999999999999e-64  Cyanothece sp. PCC 7425  Bacteria  normal  0.0152355  normal  0.805919 
 
 
-
 
NC_011729  PCC7424_0433  MCP methyltransferase, CheR-type with PAS/PAC sensor  30.68 
 
 
618 aa  243  1e-62  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009622  Smed_6342  CheB methylesterase  40.41 
 
 
336 aa  203  9.999999999999999e-51  Sinorhizobium medicae WSM419  Bacteria  normal  0.582664  normal  0.191496 
 
 
-
 
NC_011830  Dhaf_4203  MCP methyltransferase, CheR-type  34.23 
 
 
264 aa  161  7e-38  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0106813  n/a   
 
 
-
 
NC_008576  Mmc1_2635  CheB methylesterase  37.55 
 
 
262 aa  159  2e-37  Magnetococcus sp. MC-1  Bacteria  normal  0.177706  normal 
 
 
-
 
NC_010718  Nther_1604  MCP methyltransferase, CheR-type  34.09 
 
 
260 aa  159  3e-37  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.0143514  unclonable  1.76137e-23 
 
 
-
 
NC_008576  Mmc1_3393  putative PAS/PAC sensor protein  31.11 
 
 
545 aa  158  6e-37  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_1720  MCP methyltransferase, CheR-type  35.22 
 
 
278 aa  152  2e-35  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000122266 
 
 
-
 
NC_007355  Mbar_A0983  chemotaxis protein methyltransferase  33.86 
 
 
302 aa  152  2e-35  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_010320  Teth514_1609  protein-glutamate O-methyltransferase  34.98 
 
 
259 aa  151  6e-35  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00317018  n/a   
 
 
-
 
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