16 homologs were found in PanDaTox collection
for query gene Cla_0879 on replicon NC_012039
Organism: Campylobacter lari RM2100



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012039  Cla_0879  hypothetical protein  100 
 
 
459 aa  917    Campylobacter lari RM2100  Bacteria  normal  0.0515666  n/a   
 
 
-
 
NC_009802  CCC13826_0952  hypothetical protein  43.92 
 
 
441 aa  364  2e-99  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2234  hypothetical protein  27.2 
 
 
439 aa  122  9.999999999999999e-27  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  hitchhiker  0.0000177538 
 
 
-
 
NC_014150  Bmur_1561  5-methylcytosine restriction system component- like protein  28.4 
 
 
451 aa  81.6  0.00000000000003  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_013926  Aboo_1011  5-methylcytosine restriction system component-like protein  26.13 
 
 
460 aa  55.8  0.000002  Aciduliprofundum boonei T469  Archaea  hitchhiker  0.00000144218  n/a   
 
 
-
 
NC_008261  CPF_0993  hypothetical protein  24.5 
 
 
437 aa  54.7  0.000003  Clostridium perfringens ATCC 13124  Bacteria  normal  0.235646  n/a   
 
 
-
 
NC_003912  CJE0135  hypothetical protein  22.93 
 
 
443 aa  46.6  0.001  Campylobacter jejuni RM1221  Bacteria  normal  0.0584774  n/a   
 
 
-
 
NC_008787  CJJ81176_0176  hypothetical protein  23.28 
 
 
288 aa  46.2  0.001  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_0806  McrBC 5-methylcytosine restriction system component-like protein  22.69 
 
 
383 aa  46.2  0.001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.0894928  hitchhiker  0.000053751 
 
 
-
 
NC_009637  MmarC7_0003  hypothetical protein  22.22 
 
 
416 aa  45.8  0.002  Methanococcus maripaludis C7  Archaea  hitchhiker  0.00559809  unclonable  0.0000000111615 
 
 
-
 
NC_011992  Dtpsy_1862  hypothetical protein  21.52 
 
 
431 aa  45.8  0.002  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A3270  hypothetical protein  27.67 
 
 
453 aa  45.1  0.003  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0179938  normal  0.335413 
 
 
-
 
NC_008697  Noca_4768  McrBC 5-methylcytosine restriction system component-like protein  27.59 
 
 
407 aa  44.7  0.003  Nocardioides sp. JS614  Bacteria  normal  normal  0.393001 
 
 
-
 
NC_013730  Slin_2471  5-methylcytosine restriction system component- like protein  21.99 
 
 
428 aa  44.7  0.003  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.248512 
 
 
-
 
NC_009707  JJD26997_0154  hypothetical protein  22.18 
 
 
445 aa  43.9  0.006  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  0.899736  n/a   
 
 
-
 
NC_007005  Psyr_3724  hypothetical protein  19.05 
 
 
418 aa  43.5  0.007  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
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