11 homologs were found in PanDaTox collection
for query gene Cla_0042 on replicon NC_012039
Organism: Campylobacter lari RM2100



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012039  Cla_0042  hypothetical protein  100 
 
 
76 aa  147  6e-35  Campylobacter lari RM2100  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE0308  hypothetical protein  60.27 
 
 
75 aa  84.3  5e-16  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_0285  hypothetical protein  56.94 
 
 
81 aa  79.7  1e-14  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_1723  hypothetical protein  56.94 
 
 
81 aa  79.3  1e-14  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_0737  aminoacyl-histidine dipeptidase  50 
 
 
79 aa  71.6  3e-12  Campylobacter curvus 525.92  Bacteria  hitchhiker  0.00369966  n/a   
 
 
-
 
NC_009802  CCC13826_1802  hypothetical protein  49.23 
 
 
77 aa  70.9  6e-12  Campylobacter concisus 13826  Bacteria  hitchhiker  0.000442871  n/a   
 
 
-
 
NC_008599  CFF8240_1726  response regulator receiver domain-containing protein  49.09 
 
 
61 aa  55.1  3e-07  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1378  response regulator receiver domain-containing protein  33.33 
 
 
219 aa  55.1  3e-07  Geobacter metallireducens GS-15  Bacteria  normal  0.321431  normal  0.0110306 
 
 
-
 
NC_012918  GM21_1440  response regulator receiver protein  31.34 
 
 
219 aa  50.1  1e-05  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013512  Sdel_0106  response regulator receiver  30.77 
 
 
218 aa  47  8e-05  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_2081  response regulator receiver  28.99 
 
 
224 aa  40.4  0.008  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
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