More than 300 homologs were found in PanDaTox collection
for query gene Cfla_0648 on replicon NC_014151
Organism: Cellulomonas flavigena DSM 20109



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014151  Cfla_0648  two component transcriptional regulator, LuxR family  100 
 
 
211 aa  397  9.999999999999999e-111  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0377209  hitchhiker  0.00104431 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  56.16 
 
 
221 aa  215  2.9999999999999998e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  57.01 
 
 
218 aa  214  5e-55  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  58.33 
 
 
225 aa  213  1.9999999999999998e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  57.85 
 
 
229 aa  213  1.9999999999999998e-54  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  57.55 
 
 
302 aa  205  3e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  52.29 
 
 
225 aa  206  3e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  51.57 
 
 
228 aa  204  1e-51  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  56.62 
 
 
221 aa  202  2e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  56.54 
 
 
220 aa  203  2e-51  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  57.6 
 
 
215 aa  202  3e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  55.3 
 
 
226 aa  201  5e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  53.64 
 
 
226 aa  201  6e-51  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  51.39 
 
 
224 aa  200  9.999999999999999e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  53.67 
 
 
221 aa  199  1.9999999999999998e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  54.13 
 
 
221 aa  199  1.9999999999999998e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  53.6 
 
 
227 aa  199  3e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  57.01 
 
 
218 aa  199  3e-50  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  54.67 
 
 
228 aa  198  5e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  56.22 
 
 
225 aa  197  7.999999999999999e-50  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  53.64 
 
 
226 aa  197  7.999999999999999e-50  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  51.15 
 
 
224 aa  197  1.0000000000000001e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  54.63 
 
 
225 aa  197  1.0000000000000001e-49  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  52.94 
 
 
227 aa  197  1.0000000000000001e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  50 
 
 
241 aa  196  2.0000000000000003e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  55.14 
 
 
221 aa  196  3e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  53.02 
 
 
216 aa  194  7e-49  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  52.53 
 
 
221 aa  194  7e-49  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  54.38 
 
 
247 aa  194  8.000000000000001e-49  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  54.72 
 
 
217 aa  192  2e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  48.05 
 
 
231 aa  193  2e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  52.94 
 
 
239 aa  192  3e-48  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  53.05 
 
 
215 aa  192  5e-48  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  57.01 
 
 
220 aa  191  5e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  52.53 
 
 
224 aa  191  6e-48  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  53.74 
 
 
219 aa  191  8e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  52.29 
 
 
224 aa  191  9e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  54.02 
 
 
227 aa  190  1e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  53.74 
 
 
219 aa  190  1e-47  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  49.31 
 
 
218 aa  189  2e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  53.52 
 
 
234 aa  189  2.9999999999999997e-47  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  50.68 
 
 
222 aa  189  2.9999999999999997e-47  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.53 
 
 
222 aa  188  4e-47  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  52.29 
 
 
220 aa  188  5e-47  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  50.93 
 
 
224 aa  187  8e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  52.51 
 
 
221 aa  187  1e-46  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  55.66 
 
 
225 aa  187  1e-46  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  52.75 
 
 
222 aa  187  1e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  50.68 
 
 
228 aa  186  2e-46  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  50.93 
 
 
219 aa  185  4e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  51.92 
 
 
214 aa  184  7e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  53.02 
 
 
225 aa  184  8e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  49.54 
 
 
225 aa  183  1.0000000000000001e-45  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  51.17 
 
 
220 aa  183  2.0000000000000003e-45  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  50.69 
 
 
228 aa  183  2.0000000000000003e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  51.16 
 
 
230 aa  183  2.0000000000000003e-45  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  51.63 
 
 
239 aa  182  2.0000000000000003e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  52.11 
 
 
217 aa  182  3e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  50.93 
 
 
219 aa  182  3e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  52.36 
 
 
211 aa  182  3e-45  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  49.55 
 
 
223 aa  182  3e-45  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  48.15 
 
 
215 aa  182  3e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  50.45 
 
 
222 aa  181  5.0000000000000004e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  49.3 
 
 
220 aa  181  5.0000000000000004e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  52.97 
 
 
220 aa  181  6e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_013131  Caci_1616  two component transcriptional regulator, LuxR family  47.3 
 
 
226 aa  181  7e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0231149  normal  0.0629914 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  53.05 
 
 
217 aa  181  8.000000000000001e-45  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  51.87 
 
 
219 aa  180  1e-44  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_013131  Caci_6094  two component transcriptional regulator, LuxR family  50.43 
 
 
235 aa  181  1e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.634688  normal  0.121163 
 
 
-
 
NC_013510  Tcur_2233  two component transcriptional regulator, LuxR family  50.91 
 
 
232 aa  180  1e-44  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00197033  n/a   
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  50 
 
 
261 aa  179  2e-44  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  47.53 
 
 
230 aa  179  2e-44  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  49.07 
 
 
225 aa  179  2e-44  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  50 
 
 
220 aa  180  2e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0676  two component transcriptional regulator, LuxR family  51.44 
 
 
215 aa  179  2.9999999999999997e-44  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  48.15 
 
 
221 aa  179  4e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  52.51 
 
 
234 aa  178  4e-44  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.75 
 
 
226 aa  178  4.999999999999999e-44  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  49.77 
 
 
230 aa  178  4.999999999999999e-44  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0404  two component transcriptional regulator, LuxR family  51.43 
 
 
218 aa  177  8e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0987348  normal 
 
 
-
 
NC_008697  Noca_4896  response regulator receiver  50.71 
 
 
215 aa  177  9e-44  Nocardioides sp. JS614  Bacteria  normal  0.446448  normal  0.220667 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  46.82 
 
 
231 aa  177  9e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  52.27 
 
 
224 aa  177  1e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  50.87 
 
 
244 aa  176  2e-43  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  48.62 
 
 
225 aa  176  2e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  48.61 
 
 
220 aa  176  2e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  47.06 
 
 
223 aa  176  2e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  48.17 
 
 
230 aa  176  2e-43  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  45.61 
 
 
250 aa  176  3e-43  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  48.58 
 
 
218 aa  176  3e-43  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  48.21 
 
 
226 aa  176  3e-43  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  49.78 
 
 
225 aa  176  3e-43  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  53.02 
 
 
241 aa  175  4e-43  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  50 
 
 
223 aa  174  7e-43  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  45.66 
 
 
233 aa  173  9.999999999999999e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_007777  Francci3_0303  two component LuxR family transcriptional regulator  50.93 
 
 
214 aa  174  9.999999999999999e-43  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  46.55 
 
 
234 aa  173  9.999999999999999e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_009921  Franean1_6511  two component LuxR family transcriptional regulator  50.47 
 
 
215 aa  173  9.999999999999999e-43  Frankia sp. EAN1pec  Bacteria  normal  normal  0.100644 
 
 
-
 
NC_013947  Snas_3639  two component transcriptional regulator, LuxR family  46.98 
 
 
215 aa  174  9.999999999999999e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.274763  normal 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  47.37 
 
 
242 aa  174  9.999999999999999e-43  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
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