More than 300 homologs were found in PanDaTox collection
for query gene Ccur_02050 on replicon NC_013170
Organism: Cryptobacterium curtum DSM 15641



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013170  Ccur_02050  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  100 
 
 
541 aa  1098    Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2925  transcriptional regulator, LuxR family  42.24 
 
 
517 aa  379  1e-104  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2655  transcriptional regulator, LuxR family  26.05 
 
 
470 aa  89.4  2e-16  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.149331 
 
 
-
 
NC_013204  Elen_2779  transcriptional regulator, LuxR family  23.92 
 
 
505 aa  84.3  0.000000000000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.980405 
 
 
-
 
NC_013170  Ccur_13650  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  24.12 
 
 
464 aa  81.6  0.00000000000003  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_03610  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  23.49 
 
 
470 aa  73.9  0.000000000006  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.166414  normal  0.0491532 
 
 
-
 
NC_013204  Elen_0406  transcriptional regulator, LuxR family  33.93 
 
 
486 aa  73.9  0.000000000008  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.0269651 
 
 
-
 
NC_013204  Elen_2824  transcriptional regulator, LuxR family  36.45 
 
 
550 aa  72  0.00000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1431  transcriptional regulator, LuxR family  49.18 
 
 
498 aa  70.1  0.0000000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.0577596  normal  0.857351 
 
 
-
 
NC_013170  Ccur_13370  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  45.31 
 
 
537 aa  69.7  0.0000000001  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.925648  normal 
 
 
-
 
NC_013165  Shel_22730  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  42.03 
 
 
502 aa  69.7  0.0000000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_13310  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  41.89 
 
 
469 aa  69.3  0.0000000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0175254  normal 
 
 
-
 
NC_013204  Elen_0445  transcriptional regulator, LuxR family  40.91 
 
 
534 aa  68.9  0.0000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1837  transcriptional regulator, LuxR family  40.79 
 
 
487 aa  68.2  0.0000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0473  transcriptional regulator, LuxR family  42.86 
 
 
488 aa  67.4  0.0000000006  Eggerthella lenta DSM 2243  Bacteria  normal  0.815594  normal 
 
 
-
 
NC_013204  Elen_0461  transcriptional regulator, LuxR family  30.36 
 
 
542 aa  67.4  0.0000000006  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2696  transcriptional regulator, LuxR family  25.71 
 
 
535 aa  67  0.0000000009  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_3038  transcriptional regulator, LuxR family  38.24 
 
 
569 aa  65.5  0.000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0440  transcriptional regulator, LuxR family  39.39 
 
 
526 aa  65.5  0.000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_25010  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  37.5 
 
 
484 aa  65.5  0.000000003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_01760  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  33.75 
 
 
546 aa  65.1  0.000000003  Cryptobacterium curtum DSM 15641  Bacteria  normal  hitchhiker  0.0000265618 
 
 
-
 
NC_013204  Elen_0496  transcriptional regulator, LuxR family  36.71 
 
 
510 aa  65.1  0.000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.484054 
 
 
-
 
NC_013204  Elen_0597  transcriptional regulator, LuxR family  27.84 
 
 
493 aa  64.7  0.000000004  Eggerthella lenta DSM 2243  Bacteria  normal  0.882562  normal 
 
 
-
 
NC_013204  Elen_2532  transcriptional regulator, LuxR family  33.73 
 
 
500 aa  64.3  0.000000005  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0123  transcriptional regulator, LuxR family  36.36 
 
 
492 aa  64.3  0.000000006  Eggerthella lenta DSM 2243  Bacteria  normal  0.891774  normal 
 
 
-
 
NC_013204  Elen_0500  transcriptional regulator, LuxR family  32.94 
 
 
487 aa  63.5  0.000000009  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.472786 
 
 
-
 
NC_013204  Elen_0630  transcriptional regulator, LuxR family  37.66 
 
 
528 aa  63.2  0.00000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_00480  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  32.04 
 
 
606 aa  62.8  0.00000001  Cryptobacterium curtum DSM 15641  Bacteria  decreased coverage  0.00118843  normal 
 
 
-
 
NC_013165  Shel_27360  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  42.42 
 
 
517 aa  63.2  0.00000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0445329  normal 
 
 
-
 
NC_013204  Elen_1389  transcriptional regulator, LuxR family  33.33 
 
 
478 aa  62.4  0.00000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.544965  normal 
 
 
-
 
NC_013165  Shel_06810  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.21 
 
 
520 aa  62  0.00000002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.521043 
 
 
-
 
NC_013204  Elen_0167  transcriptional regulator, LuxR family  35.63 
 
 
493 aa  62.4  0.00000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.165739  normal 
 
 
-
 
NC_013204  Elen_0421  transcriptional regulator, LuxR family  39.44 
 
 
552 aa  61.6  0.00000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.0413788  hitchhiker  0.00000000225621 
 
 
-
 
NC_013525  Tter_0530  transcriptional regulator, LuxR family  39.02 
 
 
217 aa  61.2  0.00000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013204  Elen_0436  transcriptional regulator, LuxR family  35.44 
 
 
501 aa  61.6  0.00000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2258  transcriptional regulator, LuxR family  35.71 
 
 
476 aa  61.6  0.00000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0520  transcriptional regulator, LuxR family  37.88 
 
 
520 aa  61.2  0.00000005  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.1412 
 
 
-
 
NC_013204  Elen_2762  ATP-dependent transcriptional regulator, MalT- like, LuxR family  26.53 
 
 
520 aa  60.5  0.00000008  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0518  transcriptional regulator, LuxR family  40.79 
 
 
488 aa  60.5  0.00000008  Eggerthella lenta DSM 2243  Bacteria  normal  0.982453  normal  0.339001 
 
 
-
 
NC_013165  Shel_24540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  37.36 
 
 
536 aa  60.1  0.00000009  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_02650  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.24 
 
 
505 aa  58.9  0.0000002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0523  transcriptional regulator, LuxR family  29.67 
 
 
511 aa  58.9  0.0000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.500884  normal  0.253762 
 
 
-
 
NC_013170  Ccur_13460  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  41.67 
 
 
472 aa  58.9  0.0000002  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0989  transcriptional regulator, LuxR family  33.98 
 
 
499 aa  59.3  0.0000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0615  transcriptional regulator, LuxR family  31.37 
 
 
462 aa  58.5  0.0000003  Eggerthella lenta DSM 2243  Bacteria  unclonable  0.000000110739  normal 
 
 
-
 
NC_013204  Elen_2795  transcriptional regulator, LuxR family  37.88 
 
 
468 aa  58.5  0.0000003  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.000289432 
 
 
-
 
NC_013165  Shel_05580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  36.36 
 
 
512 aa  58.5  0.0000003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.735856  normal 
 
 
-
 
NC_013165  Shel_03730  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  34.96 
 
 
426 aa  58.2  0.0000004  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.532687  normal 
 
 
-
 
NC_013204  Elen_1093  transcriptional regulator, LuxR family  38.71 
 
 
505 aa  57.8  0.0000004  Eggerthella lenta DSM 2243  Bacteria  normal  0.569375  hitchhiker  0.0000000000000377381 
 
 
-
 
NC_013204  Elen_0184  transcriptional regulator, LuxR family  35.38 
 
 
507 aa  58.2  0.0000004  Eggerthella lenta DSM 2243  Bacteria  normal  0.131926  normal 
 
 
-
 
NC_013165  Shel_11580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  26.34 
 
 
515 aa  57.8  0.0000004  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.937657  normal 
 
 
-
 
NC_010718  Nther_0648  two component transcriptional regulator, LuxR family  45.9 
 
 
215 aa  58.2  0.0000004  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0133  transcriptional regulator, LuxR family  40.85 
 
 
480 aa  58.2  0.0000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.384824 
 
 
-
 
NC_013204  Elen_1592  transcriptional regulator, LuxR family  27.16 
 
 
518 aa  57.8  0.0000006  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.000355637 
 
 
-
 
NC_013204  Elen_0506  transcriptional regulator, LuxR family  27.37 
 
 
519 aa  57.4  0.0000006  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.274884 
 
 
-
 
NC_013170  Ccur_13550  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  33.33 
 
 
506 aa  57.4  0.0000006  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_3342  LuxR family transcriptional regulator  46.77 
 
 
461 aa  57.4  0.0000006  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.7323  n/a   
 
 
-
 
NC_013204  Elen_2786  transcriptional regulator, LuxR family  38.55 
 
 
511 aa  57  0.0000007  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.0490323 
 
 
-
 
NC_013204  Elen_1015  transcriptional regulator, LuxR family  37.84 
 
 
509 aa  57  0.0000008  Eggerthella lenta DSM 2243  Bacteria  normal  0.221092  normal  0.129145 
 
 
-
 
NC_013204  Elen_0171  transcriptional regulator, LuxR family  29.69 
 
 
484 aa  57  0.0000008  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0617  transcriptional regulator, LuxR family  41.18 
 
 
505 aa  56.6  0.000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.0935525  normal 
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  43.1 
 
 
214 aa  56.6  0.000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_013131  Caci_0637  two component transcriptional regulator, LuxR family  42.59 
 
 
229 aa  56.2  0.000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.565019 
 
 
-
 
NC_013204  Elen_0489  transcriptional regulator, LuxR family  39.19 
 
 
468 aa  56.6  0.000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.257042 
 
 
-
 
NC_013204  Elen_0157  transcriptional regulator, LuxR family  33.72 
 
 
321 aa  56.2  0.000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2114  transcriptional regulator, LuxR family  30.48 
 
 
191 aa  56.2  0.000001  Eggerthella lenta DSM 2243  Bacteria  unclonable  0.00000000451621  normal  0.459179 
 
 
-
 
NC_013204  Elen_0578  transcriptional regulator, LuxR family  42.62 
 
 
474 aa  56.2  0.000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.28219  normal 
 
 
-
 
NC_013204  Elen_2816  transcriptional regulator, LuxR family  31.87 
 
 
471 aa  56.2  0.000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.138304  hitchhiker  0.00338242 
 
 
-
 
NC_013204  Elen_0514  transcriptional regulator, LuxR family  36.23 
 
 
493 aa  56.2  0.000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.559597 
 
 
-
 
NC_013204  Elen_0976  transcriptional regulator, LuxR family  44.64 
 
 
501 aa  56.6  0.000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.018057 
 
 
-
 
NC_013170  Ccur_12490  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  40 
 
 
560 aa  55.8  0.000002  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_1181  response regulator, positive activator of uhpT transcription  33.33 
 
 
318 aa  55.8  0.000002  Cytophaga hutchinsonii ATCC 33406  Bacteria  hitchhiker  0.0000000041551  decreased coverage  0.008996 
 
 
-
 
NC_009487  SaurJH9_2415  two component LuxR family transcriptional regulator  27.46 
 
 
217 aa  55.8  0.000002  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_2463  response regulator receiver  27.46 
 
 
217 aa  55.8  0.000002  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_2353  transcriptional regulator, LuxR family  34 
 
 
516 aa  56.2  0.000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2775  transcriptional regulator, LuxR family  41.82 
 
 
481 aa  55.8  0.000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.257993  normal  0.934511 
 
 
-
 
NC_013204  Elen_2723  transcriptional regulator, LuxR family  38.46 
 
 
509 aa  56.2  0.000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.397924  normal 
 
 
-
 
NC_011149  SeAg_B0595  transcriptional regulator FimZ  37.18 
 
 
210 aa  55.1  0.000003  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.447967  n/a   
 
 
-
 
NC_013204  Elen_2812  transcriptional regulator, LuxR family  38.1 
 
 
522 aa  55.5  0.000003  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.000674561  hitchhiker  0.0000653029 
 
 
-
 
NC_011205  SeD_A0598  transcriptional regulator FimZ  37.18 
 
 
210 aa  55.1  0.000003  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.110504 
 
 
-
 
NC_013204  Elen_0971  transcriptional regulator, LuxR family  32.5 
 
 
313 aa  55.1  0.000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.16732  hitchhiker  0.00115778 
 
 
-
 
NC_013204  Elen_0606  transcriptional regulator, LuxR family  28.21 
 
 
506 aa  55.5  0.000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.290399 
 
 
-
 
NC_013204  Elen_0368  transcriptional regulator, LuxR family  37.1 
 
 
516 aa  55.1  0.000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0108  transcriptional regulator, LuxR family  46.43 
 
 
493 aa  54.7  0.000004  Eggerthella lenta DSM 2243  Bacteria  normal  0.44109  normal 
 
 
-
 
CP001637  EcDH1_3078  two component transcriptional regulator, LuxR family  35.8 
 
 
210 aa  54.7  0.000005  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_0289  transcriptional regulator, LuxR family  32.94 
 
 
498 aa  54.3  0.000005  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.797409 
 
 
-
 
NC_011094  SeSA_A0594  transcriptional regulator FimZ  37.18 
 
 
210 aa  54.7  0.000005  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.627077  hitchhiker  0.00790766 
 
 
-
 
NC_011353  ECH74115_0636  transcriptional regulator FimZ  35.8 
 
 
210 aa  54.7  0.000005  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.931873  normal  0.250092 
 
 
-
 
NC_011080  SNSL254_A0602  transcriptional regulator FimZ  37.18 
 
 
210 aa  54.7  0.000005  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.379869  normal  0.0923244 
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  48.15 
 
 
213 aa  54.7  0.000005  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_011083  SeHA_C0659  transcriptional regulator FimZ  37.18 
 
 
210 aa  54.7  0.000005  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.611229  normal 
 
 
-
 
NC_009801  EcE24377A_0577  transcriptional regulator FimZ  35.8 
 
 
210 aa  54.7  0.000005  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_0580  transcriptional regulator FimZ  35.8 
 
 
210 aa  54.7  0.000005  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  43.86 
 
 
225 aa  54.3  0.000006  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
NC_010718  Nther_0747  two component transcriptional regulator, LuxR family  29.17 
 
 
232 aa  54.3  0.000006  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.643618  normal  0.38139 
 
 
-
 
NC_013204  Elen_2699  transcriptional regulator, LuxR family  39.68 
 
 
478 aa  54.3  0.000006  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0341  transcriptional regulator, LuxR family  32.91 
 
 
478 aa  54.3  0.000006  Eggerthella lenta DSM 2243  Bacteria  normal  0.953627  normal 
 
 
-
 
NC_013165  Shel_23170  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  36.67 
 
 
474 aa  54.3  0.000006  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.23412 
 
 
-
 
NC_012892  B21_00490  hypothetical protein  34.57 
 
 
210 aa  53.9  0.000007  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3087  transcriptional regulator FimZ  34.57 
 
 
210 aa  53.9  0.000007  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
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