More than 300 homologs were found in PanDaTox collection
for query gene Ccur_01650 on replicon NC_013170
Organism: Cryptobacterium curtum DSM 15641



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013170  Ccur_01650  cell envelope-related function transcriptional attenuator common domain protein  100 
 
 
512 aa  1035    Cryptobacterium curtum DSM 15641  Bacteria  normal  0.475151  hitchhiker  0.0000000000510123 
 
 
-
 
NC_013170  Ccur_08290  cell envelope-related function transcriptional attenuator common domain protein  58.67 
 
 
443 aa  441  9.999999999999999e-123  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.154905  normal  0.235154 
 
 
-
 
NC_013204  Elen_3000  cell envelope-related transcriptional attenuator  49.39 
 
 
495 aa  440  9.999999999999999e-123  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_01960  cell envelope-related function transcriptional attenuator common domain protein  43.29 
 
 
490 aa  370  1e-101  Slackia heliotrinireducens DSM 20476  Bacteria  hitchhiker  0.00481524  normal 
 
 
-
 
NC_013203  Apar_0187  cell envelope-related transcriptional attenuator  37.62 
 
 
563 aa  301  2e-80  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.234515 
 
 
-
 
NC_013165  Shel_01950  cell envelope-related function transcriptional attenuator common domain protein  47.85 
 
 
516 aa  300  4e-80  Slackia heliotrinireducens DSM 20476  Bacteria  decreased coverage  0.000132864  normal 
 
 
-
 
NC_013204  Elen_3081  cell envelope-related transcriptional attenuator  34.41 
 
 
531 aa  181  2.9999999999999997e-44  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1106  cell envelope-related transcriptional attenuator  30.37 
 
 
497 aa  171  2e-41  Eggerthella lenta DSM 2243  Bacteria  normal  0.0413788  hitchhiker  0.0000000000000467776 
 
 
-
 
NC_013203  Apar_1295  cell envelope-related transcriptional attenuator  39.07 
 
 
407 aa  171  2e-41  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.865299 
 
 
-
 
NC_013522  Taci_0893  cell envelope-related transcriptional attenuator  33.43 
 
 
453 aa  154  5e-36  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.301121  n/a   
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  27.57 
 
 
405 aa  150  6e-35  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  39.38 
 
 
349 aa  148  2.0000000000000003e-34  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_15160  cell envelope-related function transcriptional attenuator common domain protein  27.29 
 
 
528 aa  147  6e-34  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.481311  normal  0.251457 
 
 
-
 
NC_013204  Elen_2449  cell envelope-related transcriptional attenuator  33.94 
 
 
406 aa  144  3e-33  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.00377769  normal 
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  29.92 
 
 
497 aa  143  9.999999999999999e-33  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008532  STER_0378  transcriptional regulator  31.25 
 
 
408 aa  141  3e-32  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.0016641  n/a   
 
 
-
 
NC_009674  Bcer98_3735  cell envelope-related transcriptional attenuator  32.48 
 
 
383 aa  140  3.9999999999999997e-32  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  33.9 
 
 
319 aa  138  2e-31  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_002976  SERP1893  transcriptional regulator, putative  33.55 
 
 
316 aa  137  6.0000000000000005e-31  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  29.59 
 
 
468 aa  137  6.0000000000000005e-31  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_4992  cell envelope-related transcriptional attenuator  37.27 
 
 
374 aa  135  9.999999999999999e-31  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5306  LytR family transcription antiterminator  35.45 
 
 
377 aa  134  3.9999999999999996e-30  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1876  cell envelope-related transcriptional attenuator  35.04 
 
 
455 aa  133  9e-30  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000275813  normal 
 
 
-
 
NC_005945  BAS5047  LytR family transcription antiterminator  35.45 
 
 
375 aa  132  2.0000000000000002e-29  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3347  transcriptional regulator LytR, attenuator for lytABC and lytR expression  34.86 
 
 
345 aa  132  2.0000000000000002e-29  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.000000255205  n/a   
 
 
-
 
NC_005957  BT9727_4877  LytR family transcriptional regulator  35.45 
 
 
375 aa  132  2.0000000000000002e-29  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4892  LytR family transcriptional regulator  35.45 
 
 
375 aa  132  2.0000000000000002e-29  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5288  transcription antiterminator, LytR family  35.45 
 
 
375 aa  132  2.0000000000000002e-29  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000327862 
 
 
-
 
NC_007530  GBAA_5432  LytR family transcription antiterminator  35.45 
 
 
375 aa  132  2.0000000000000002e-29  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5319  transcription antiterminator, LytR family  35.45 
 
 
374 aa  132  2.0000000000000002e-29  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  28.82 
 
 
509 aa  131  3e-29  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  35.78 
 
 
307 aa  131  3e-29  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_011658  BCAH187_A5364  transcription antiterminator, LytR family  35 
 
 
377 aa  131  3e-29  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5640  transcription antiterminator, LytR family  35.45 
 
 
372 aa  131  4.0000000000000003e-29  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00000000000247251 
 
 
-
 
NC_009523  RoseRS_0131  cell envelope-related transcriptional attenuator  36.21 
 
 
353 aa  129  2.0000000000000002e-28  Roseiflexus sp. RS-1  Bacteria  normal  0.763008  normal 
 
 
-
 
NC_008578  Acel_0411  cell envelope-related transcriptional attenuator  25.65 
 
 
520 aa  126  8.000000000000001e-28  Acidothermus cellulolyticus 11B  Bacteria  normal  0.118906  normal 
 
 
-
 
NC_009674  Bcer98_0523  cell envelope-related transcriptional attenuator  31.23 
 
 
337 aa  126  9e-28  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG0368  hypothetical protein  32.69 
 
 
435 aa  125  1e-27  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_0136  cell envelope-related transcriptional attenuator  34.51 
 
 
466 aa  125  1e-27  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0803  cell envelope-related transcriptional attenuator  35.55 
 
 
317 aa  125  1e-27  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  29.57 
 
 
480 aa  125  2e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_009487  SaurJH9_2334  cell envelope-related transcriptional attenuator  37.44 
 
 
318 aa  125  2e-27  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.591324  n/a   
 
 
-
 
NC_009632  SaurJH1_2377  transcription attenuator LytR  37.44 
 
 
318 aa  125  2e-27  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_2257  cell envelope-related transcriptional attenuator  30.82 
 
 
362 aa  125  2e-27  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.518809 
 
 
-
 
NC_010718  Nther_2377  cell envelope-related transcriptional attenuator  33.86 
 
 
344 aa  124  3e-27  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.00145979  normal 
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  28.57 
 
 
505 aa  124  4e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_009674  Bcer98_1499  cell envelope-related transcriptional attenuator  34.12 
 
 
329 aa  124  4e-27  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.000000186761  n/a   
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  34.3 
 
 
419 aa  124  4e-27  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_011658  BCAH187_A0946  transcription antiterminator, LytR family  35.02 
 
 
400 aa  123  7e-27  Bacillus cereus AH187  Bacteria  hitchhiker  0.00000012569  n/a   
 
 
-
 
NC_003909  BCE_3605  LytR family transcription antiterminator  32.28 
 
 
345 aa  123  8e-27  Bacillus cereus ATCC 10987  Bacteria  normal  0.0149783  n/a   
 
 
-
 
NC_011658  BCAH187_A3613  transcription antiterminator, LytR family  31.35 
 
 
345 aa  123  9e-27  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000276906  n/a   
 
 
-
 
NC_008261  CPF_2378  cell envelope-related function transcriptional attenuator  28.64 
 
 
437 aa  122  9.999999999999999e-27  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0983623  n/a   
 
 
-
 
NC_005945  BAS3381  LytR family transcription antiterminator  34.33 
 
 
345 aa  122  1.9999999999999998e-26  Bacillus anthracis str. Sterne  Bacteria  normal  0.288134  n/a   
 
 
-
 
NC_007530  GBAA_3647  LytR family transcription antiterminator  34.33 
 
 
345 aa  122  1.9999999999999998e-26  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0513784  n/a   
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  29.59 
 
 
481 aa  122  1.9999999999999998e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_011773  BCAH820_3598  transcription antiterminator, LytR family  34.33 
 
 
345 aa  122  1.9999999999999998e-26  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000000156827 
 
 
-
 
NC_009767  Rcas_0369  cell envelope-related transcriptional attenuator  33.33 
 
 
356 aa  121  3e-26  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.117824  normal  0.3088 
 
 
-
 
NC_005945  BAS0572  LytR family transcription antiterminator  32.59 
 
 
337 aa  121  3.9999999999999996e-26  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0605  LytR family transcription antiterminator  32.59 
 
 
333 aa  121  3.9999999999999996e-26  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_1558  cell envelope-related transcriptional attenuator  27.37 
 
 
545 aa  120  3.9999999999999996e-26  Frankia sp. CcI3  Bacteria  normal  normal  0.931439 
 
 
-
 
NC_011773  BCAH820_0661  transcription antiterminator, LytR family  32.59 
 
 
338 aa  121  3.9999999999999996e-26  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.34714e-25 
 
 
-
 
NC_011725  BCB4264_A0838  transcription antiterminator, LytR family  34.6 
 
 
399 aa  121  3.9999999999999996e-26  Bacillus cereus B4264  Bacteria  hitchhiker  0.00382216  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0519  cell envelope-related transcriptional attenuator  35.41 
 
 
338 aa  120  4.9999999999999996e-26  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0271  cell envelope-related function transcriptional attenuator  37.95 
 
 
340 aa  120  4.9999999999999996e-26  Clostridium perfringens SM101  Bacteria  normal  0.968761  n/a   
 
 
-
 
NC_011772  BCG9842_B4498  transcription antiterminator, LytR family  34.18 
 
 
399 aa  120  4.9999999999999996e-26  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.0000000000182536 
 
 
-
 
NC_013174  Jden_1865  cell envelope-related transcriptional attenuator  31.09 
 
 
434 aa  120  4.9999999999999996e-26  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.0368682 
 
 
-
 
NC_008261  CPF_0280  putative transcriptional regulator  38.46 
 
 
340 aa  120  7e-26  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2090  transcription regulator LytR-like protein  29.12 
 
 
437 aa  120  7e-26  Clostridium perfringens SM101  Bacteria  normal  0.853394  n/a   
 
 
-
 
NC_011729  PCC7424_2953  cell envelope-related transcriptional attenuator  33.74 
 
 
502 aa  120  7e-26  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.873931 
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  28.65 
 
 
478 aa  120  7.999999999999999e-26  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3295  transcriptional regulator LytR, attenuator for lytABC and lytR expression  33.58 
 
 
345 aa  119  9e-26  Bacillus cereus E33L  Bacteria  normal  0.189328  n/a   
 
 
-
 
NC_008346  Swol_0125  putative transcriptional regulator  32.42 
 
 
380 aa  119  9e-26  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.00440963  n/a   
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  31.65 
 
 
390 aa  119  9e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0694  cell envelope-related transcriptional attenuator  34.6 
 
 
401 aa  119  9.999999999999999e-26  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.12922  n/a   
 
 
-
 
NC_003909  BCE_0673  LytR family transcription antiterminator  31.8 
 
 
337 aa  119  9.999999999999999e-26  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0516  LytR family transcriptional regulator  32.14 
 
 
337 aa  119  9.999999999999999e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0516  LytR family transcriptional regulator  34.93 
 
 
337 aa  119  9.999999999999999e-26  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_1360  cell envelope-related transcriptional attenuator  33.33 
 
 
436 aa  119  9.999999999999999e-26  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_008531  LEUM_1851  transcriptional regulator  35.86 
 
 
392 aa  119  9.999999999999999e-26  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_2095  cell envelope-related transcriptional attenuator  30.9 
 
 
411 aa  119  9.999999999999999e-26  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0875  LytR family transcription antiterminator  34.18 
 
 
400 aa  119  1.9999999999999998e-25  Bacillus cereus ATCC 10987  Bacteria  normal  0.0676567  n/a   
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  26.7 
 
 
521 aa  119  1.9999999999999998e-25  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_011658  BCAH187_A0732  transcription antiterminator, LytR family  32.58 
 
 
338 aa  118  1.9999999999999998e-25  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B1619  transcription antiterminator, LytR family  34.19 
 
 
345 aa  118  1.9999999999999998e-25  Bacillus cereus G9842  Bacteria  hitchhiker  0.00116574  hitchhiker  0.0000348163 
 
 
-
 
NC_013595  Sros_1363  Transcriptional regulator-like protein  26.67 
 
 
530 aa  117  3e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  0.640186  normal 
 
 
-
 
NC_009513  Lreu_1057  cell envelope-related transcriptional attenuator  35.68 
 
 
333 aa  118  3e-25  Lactobacillus reuteri DSM 20016  Bacteria  normal  0.0371332  n/a   
 
 
-
 
NC_014158  Tpau_1061  cell envelope-related transcriptional attenuator  27.13 
 
 
567 aa  118  3e-25  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1996  cell envelope-related transcriptional attenuator  26.05 
 
 
527 aa  118  3e-25  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.177975 
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  28.48 
 
 
445 aa  117  3.9999999999999997e-25  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_003909  BCE_2056  LytR family transcription antiterminator  32.46 
 
 
333 aa  117  5e-25  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00905786  n/a   
 
 
-
 
NC_005945  BAS1830  LytR family transcription antiterminator  32.46 
 
 
333 aa  117  5e-25  Bacillus anthracis str. Sterne  Bacteria  normal  0.241912  n/a   
 
 
-
 
NC_005957  BT9727_1804  LytR family transcriptional regulator  32.46 
 
 
333 aa  117  5e-25  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00220424  n/a   
 
 
-
 
NC_007530  GBAA_1973  LytR family transcription antiterminator  32.46 
 
 
333 aa  117  5e-25  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_2008  transcription antiterminator, LytR family  32.46 
 
 
333 aa  117  5e-25  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  6.0610299999999994e-43 
 
 
-
 
NC_006274  BCZK1787  LytR family transcriptional regulator  32.46 
 
 
335 aa  117  6e-25  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4096  cell envelope-related transcriptional attenuator  26.3 
 
 
468 aa  117  6e-25  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3352  transcription antiterminator, LytR family  32.26 
 
 
335 aa  117  6.9999999999999995e-25  Bacillus cereus G9842  Bacteria  hitchhiker  0.0000199263  hitchhiker  0.0000000000000086496 
 
 
-
 
NC_011725  BCB4264_A0643  transcription antiterminator, LytR family  34.45 
 
 
338 aa  116  7.999999999999999e-25  Bacillus cereus B4264  Bacteria  normal  0.849345  n/a   
 
 
-
 
NC_011729  PCC7424_2873  cell envelope-related transcriptional attenuator  34.78 
 
 
475 aa  116  7.999999999999999e-25  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011725  BCB4264_A3698  transcription antiterminator, LytR family  34.08 
 
 
345 aa  116  7.999999999999999e-25  Bacillus cereus B4264  Bacteria  hitchhiker  0.00180581  n/a   
 
 
-
 
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