More than 300 homologs were found in PanDaTox collection
for query gene Ccur_00480 on replicon NC_013170
Organism: Cryptobacterium curtum DSM 15641



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013170  Ccur_00480  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  100 
 
 
606 aa  1235  Cryptobacterium curtum DSM 15641  Bacteria  decreased coverage  0.00118843  normal 
 
 
-
 
NC_013204  Elen_0461  transcriptional regulator, LuxR family  44.21 
 
 
542 aa  484  1e-135  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0421  transcriptional regulator, LuxR family  45.33 
 
 
552 aa  391  1e-107  Eggerthella lenta DSM 2243  Bacteria  normal  0.0413788  hitchhiker  2.25621e-09 
 
 
-
 
NC_013204  Elen_2786  transcriptional regulator, LuxR family  32.25 
 
 
511 aa  295  2e-78  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.0490323 
 
 
-
 
NC_013165  Shel_24540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  41.22 
 
 
536 aa  292  1e-77  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_06810  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  38.9 
 
 
520 aa  261  2e-68  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.521043 
 
 
-
 
NC_013204  Elen_2723  transcriptional regulator, LuxR family  35.62 
 
 
509 aa  243  8e-63  Eggerthella lenta DSM 2243  Bacteria  normal  0.397924  normal 
 
 
-
 
NC_013204  Elen_0126  hypothetical protein  26.49 
 
 
530 aa  124  4e-27  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0368  transcriptional regulator, LuxR family  25.45 
 
 
516 aa  98.2  4e-19  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2699  transcriptional regulator, LuxR family  54.93 
 
 
478 aa  89.4  2e-16  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0133  transcriptional regulator, LuxR family  47.06 
 
 
480 aa  81.3  5e-14  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.384824 
 
 
-
 
NC_013204  Elen_2258  transcriptional regulator, LuxR family  43.14 
 
 
476 aa  81.3  5e-14  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_03730  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  24.49 
 
 
426 aa  81.3  5e-14  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.532687  normal 
 
 
-
 
NC_013165  Shel_23170  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.06 
 
 
474 aa  75.9  2e-12  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.23412 
 
 
-
 
NC_013204  Elen_2779  transcriptional regulator, LuxR family  54.84 
 
 
505 aa  75.9  2e-12  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.980405 
 
 
-
 
NC_013170  Ccur_13650  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  49.28 
 
 
464 aa  75.9  2e-12  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0436  transcriptional regulator, LuxR family  40.22 
 
 
501 aa  74.3  6e-12  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2816  transcriptional regulator, LuxR family  47.14 
 
 
471 aa  74.3  6e-12  Eggerthella lenta DSM 2243  Bacteria  normal  0.138304  hitchhiker  0.00338242 
 
 
-
 
NC_013204  Elen_0976  transcriptional regulator, LuxR family  50 
 
 
501 aa  73.9  7e-12  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.018057 
 
 
-
 
NC_013204  Elen_2655  transcriptional regulator, LuxR family  54.39 
 
 
470 aa  73.6  1e-11  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.149331 
 
 
-
 
NC_013204  Elen_0108  transcriptional regulator, LuxR family  43.53 
 
 
493 aa  72.4  2e-11  Eggerthella lenta DSM 2243  Bacteria  normal  0.44109  normal 
 
 
-
 
NC_013165  Shel_26890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  36.78 
 
 
515 aa  72  3e-11  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2688  transcriptional regulator, LuxR family  49.21 
 
 
470 aa  71.6  4e-11  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2532  transcriptional regulator, LuxR family  37.38 
 
 
500 aa  71.2  5e-11  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0440  transcriptional regulator, LuxR family  50.75 
 
 
526 aa  70.5  8e-11  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0289  transcriptional regulator, LuxR family  39.05 
 
 
498 aa  70.5  8e-11  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.797409 
 
 
-
 
NC_013204  Elen_2929  transcriptional regulator, LuxR family  39.19 
 
 
462 aa  70.5  9e-11  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_13370  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  45.33 
 
 
537 aa  70.5  9e-11  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.925648  normal 
 
 
-
 
NC_013204  Elen_2824  transcriptional regulator, LuxR family  39.51 
 
 
550 aa  70.5  9e-11  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0181  transcriptional regulator, LuxR family  51.56 
 
 
600 aa  69.7  1e-10  Eggerthella lenta DSM 2243  Bacteria  normal  0.294561  normal 
 
 
-
 
NC_013204  Elen_0506  transcriptional regulator, LuxR family  34.29 
 
 
519 aa  70.1  1e-10  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.274884 
 
 
-
 
NC_013204  Elen_0445  transcriptional regulator, LuxR family  46.88 
 
 
534 aa  70.5  1e-10  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0485  transcriptional regulator, LuxR family  42.25 
 
 
537 aa  69.3  2e-10  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.619389 
 
 
-
 
NC_013204  Elen_0531  transcriptional regulator, LuxR family  43.66 
 
 
529 aa  68.9  2e-10  Eggerthella lenta DSM 2243  Bacteria  normal  0.614613  normal  0.848046 
 
 
-
 
NC_013170  Ccur_03610  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  50.91 
 
 
470 aa  68.6  3e-10  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.166414  normal  0.0491532 
 
 
-
 
NC_013204  Elen_1592  transcriptional regulator, LuxR family  38.18 
 
 
518 aa  68.6  3e-10  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.000355637 
 
 
-
 
NC_013204  Elen_2932  transcriptional regulator, LuxR family  45.45 
 
 
492 aa  68.9  3e-10  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2925  transcriptional regulator, LuxR family  50 
 
 
517 aa  68.2  4e-10  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_13460  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  48.28 
 
 
472 aa  68.2  4e-10  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0167  transcriptional regulator, LuxR family  41.67 
 
 
493 aa  68.2  4e-10  Eggerthella lenta DSM 2243  Bacteria  normal  0.165739  normal 
 
 
-
 
NC_013204  Elen_0171  transcriptional regulator, LuxR family  44.29 
 
 
484 aa  68.6  4e-10  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0496  transcriptional regulator, LuxR family  37.11 
 
 
510 aa  67.8  6e-10  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.484054 
 
 
-
 
NC_013204  Elen_0406  transcriptional regulator, LuxR family  42.47 
 
 
486 aa  67  9e-10  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.0269651 
 
 
-
 
NC_013204  Elen_2108  transcriptional regulator, LuxR family  37.8 
 
 
516 aa  66.6  1e-09  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.00926757  normal  0.183235 
 
 
-
 
NC_013204  Elen_0597  transcriptional regulator, LuxR family  54.55 
 
 
493 aa  66.2  2e-09  Eggerthella lenta DSM 2243  Bacteria  normal  0.882562  normal 
 
 
-
 
NC_013165  Shel_16610  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  27.78 
 
 
491 aa  66.2  2e-09  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0119595  normal  0.714327 
 
 
-
 
NC_013204  Elen_1008  transcriptional regulator, LuxR family  40.28 
 
 
495 aa  65.5  3e-09  Eggerthella lenta DSM 2243  Bacteria  normal  0.831923  normal  0.0679507 
 
 
-
 
NC_013204  Elen_0518  transcriptional regulator, LuxR family  41.77 
 
 
488 aa  65.1  3e-09  Eggerthella lenta DSM 2243  Bacteria  normal  0.982453  normal  0.339001 
 
 
-
 
NC_013165  Shel_27360  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.46 
 
 
517 aa  65.1  3e-09  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0445329  normal 
 
 
-
 
NC_013165  Shel_12700  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  35.21 
 
 
488 aa  65.5  3e-09  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_08650  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  38.89 
 
 
508 aa  65.1  4e-09  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.197798  normal  0.463051 
 
 
-
 
NC_013170  Ccur_12490  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  37.65 
 
 
560 aa  64.7  5e-09  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_13310  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  39.24 
 
 
469 aa  64.3  6e-09  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0175254  normal 
 
 
-
 
NC_013204  Elen_1389  transcriptional regulator, LuxR family  37.04 
 
 
478 aa  64.3  6e-09  Eggerthella lenta DSM 2243  Bacteria  normal  0.544965  normal 
 
 
-
 
NC_013204  Elen_2693  transcriptional regulator, LuxR family  40 
 
 
80 aa  63.9  7e-09  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0989  transcriptional regulator, LuxR family  40.85 
 
 
499 aa  63.9  9e-09  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0523  transcriptional regulator, LuxR family  39.02 
 
 
511 aa  63.2  1e-08  Eggerthella lenta DSM 2243  Bacteria  normal  0.500884  normal  0.253762 
 
 
-
 
NC_013204  Elen_2290  transcriptional regulator, LuxR family  41.33 
 
 
493 aa  63.5  1e-08  Eggerthella lenta DSM 2243  Bacteria  normal  0.10968  normal 
 
 
-
 
NC_013165  Shel_05580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  32.97 
 
 
512 aa  63.5  1e-08  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.735856  normal 
 
 
-
 
NC_013204  Elen_1431  transcriptional regulator, LuxR family  49.15 
 
 
498 aa  63.2  1e-08  Eggerthella lenta DSM 2243  Bacteria  normal  0.0577596  normal  0.857351 
 
 
-
 
NC_013204  Elen_2812  transcriptional regulator, LuxR family  40.58 
 
 
522 aa  63.2  1e-08  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.000674561  hitchhiker  6.53029e-05 
 
 
-
 
NC_013204  Elen_0992  transcriptional regulator, LuxR family  41.43 
 
 
493 aa  63.5  1e-08  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2696  transcriptional regulator, LuxR family  43.28 
 
 
535 aa  63.2  1e-08  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_02050  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  32.04 
 
 
541 aa  62.8  2e-08  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0123  transcriptional regulator, LuxR family  33.03 
 
 
492 aa  62.4  2e-08  Eggerthella lenta DSM 2243  Bacteria  normal  0.891774  normal 
 
 
-
 
NC_013204  Elen_2353  transcriptional regulator, LuxR family  41.89 
 
 
516 aa  62.4  2e-08  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0269  transcriptional regulator, LuxR family  38.67 
 
 
499 aa  62.8  2e-08  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2762  ATP-dependent transcriptional regulator, MalT- like, LuxR family  33.79 
 
 
520 aa  62.8  2e-08  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0630  transcriptional regulator, LuxR family  40 
 
 
528 aa  62.8  2e-08  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0184  transcriptional regulator, LuxR family  40 
 
 
507 aa  62  3e-08  Eggerthella lenta DSM 2243  Bacteria  normal  0.131926  normal 
 
 
-
 
NC_013204  Elen_3038  transcriptional regulator, LuxR family  33.75 
 
 
569 aa  62  3e-08  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_20840  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  41.18 
 
 
524 aa  62.4  3e-08  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.982335  normal 
 
 
-
 
NC_013204  Elen_1837  transcriptional regulator, LuxR family  42.03 
 
 
487 aa  62  3e-08  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0072  transcriptional regulator, LuxR family  39.68 
 
 
477 aa  62  3e-08  Eggerthella lenta DSM 2243  Bacteria  normal  0.323936  normal 
 
 
-
 
NC_013204  Elen_0500  transcriptional regulator, LuxR family  32.99 
 
 
487 aa  62  3e-08  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.472786 
 
 
-
 
NC_013204  Elen_2795  transcriptional regulator, LuxR family  41.25 
 
 
468 aa  61.6  4e-08  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.000289432 
 
 
-
 
NC_013165  Shel_06100  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.12 
 
 
518 aa  61.6  4e-08  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.603093 
 
 
-
 
NC_013165  Shel_11580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  41.79 
 
 
515 aa  61.6  4e-08  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.937657  normal 
 
 
-
 
NC_013204  Elen_2742  transcriptional regulator, LuxR family  38.27 
 
 
544 aa  61.6  4e-08  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0473  transcriptional regulator, LuxR family  42.86 
 
 
488 aa  61.6  4e-08  Eggerthella lenta DSM 2243  Bacteria  normal  0.815594  normal 
 
 
-
 
NC_013204  Elen_0529  transcriptional regulator, LuxR family  42.03 
 
 
518 aa  61.2  5e-08  Eggerthella lenta DSM 2243  Bacteria  normal  0.401207  normal  0.573322 
 
 
-
 
NC_013165  Shel_22730  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  40.58 
 
 
502 aa  60.8  7e-08  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_3022  ATP-dependent transcriptional regulator, MalT- like, LuxR family  34.94 
 
 
485 aa  60.8  7e-08  Eggerthella lenta DSM 2243  Bacteria  normal  0.709367  normal 
 
 
-
 
NC_013204  Elen_0606  transcriptional regulator, LuxR family  30.53 
 
 
506 aa  60.5  9e-08  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.290399 
 
 
-
 
NC_013204  Elen_0617  transcriptional regulator, LuxR family  32.26 
 
 
505 aa  59.7  1e-07  Eggerthella lenta DSM 2243  Bacteria  normal  0.0935525  normal 
 
 
-
 
NC_013204  Elen_2775  transcriptional regulator, LuxR family  48.21 
 
 
481 aa  59.7  1e-07  Eggerthella lenta DSM 2243  Bacteria  normal  0.257993  normal  0.934511 
 
 
-
 
NC_009832  Spro_0612  LuxR family transcriptional regulator  47.62 
 
 
252 aa  58.9  2e-07  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_13550  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  35.44 
 
 
506 aa  59.3  2e-07  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0514  transcriptional regulator, LuxR family  42.37 
 
 
493 aa  58.5  3e-07  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.559597 
 
 
-
 
NC_013204  Elen_0578  transcriptional regulator, LuxR family  40.68 
 
 
474 aa  58.2  4e-07  Eggerthella lenta DSM 2243  Bacteria  normal  0.28219  normal 
 
 
-
 
NC_013204  Elen_0615  transcriptional regulator, LuxR family  34.33 
 
 
462 aa  57.8  5e-07  Eggerthella lenta DSM 2243  Bacteria  unclonable  1.10739e-07  normal 
 
 
-
 
NC_013170  Ccur_10150  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  34.21 
 
 
483 aa  57.8  5e-07  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.906615  hitchhiker  0.00359447 
 
 
-
 
NC_010718  Nther_0648  two component transcriptional regulator, LuxR family  36.17 
 
 
215 aa  57.4  7e-07  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_01760  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  32.93 
 
 
546 aa  57  9e-07  Cryptobacterium curtum DSM 15641  Bacteria  normal  hitchhiker  2.65618e-05 
 
 
-
 
NC_013204  Elen_2758  transcriptional regulator, LuxR family  35.06 
 
 
523 aa  56.2  1e-06  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_02650  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  30 
 
 
505 aa  57  1e-06  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0341  transcriptional regulator, LuxR family  34.29 
 
 
478 aa  57  1e-06  Eggerthella lenta DSM 2243  Bacteria  normal  0.953627  normal 
 
 
-
 
NC_010322  PputGB1_3251  LuxR family transcriptional regulator  35.53 
 
 
280 aa  56.2  2e-06  Pseudomonas putida GB-1  Bacteria  normal  normal  0.139103 
 
 
-
 
NC_013165  Shel_25010  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  33.8 
 
 
484 aa  55.8  2e-06  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0392  transcriptional regulator, LuxR family  39.71 
 
 
529 aa  55.8  2e-06  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
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