36 homologs were found in PanDaTox collection
for query gene Ccel_2647 on replicon NC_011898
Organism: Clostridium cellulolyticum H10



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011898  Ccel_2647  signal transduction histidine kinase regulating citrate/malate metabolism  100 
 
 
426 aa  878    Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2424  signal transduction histidine kinase regulating citrate/malate metabolism  58.27 
 
 
423 aa  496  1e-139  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2641  signal transduction histidine kinase regulating citrate/malate metabolism  49.16 
 
 
423 aa  422  1e-117  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2545  signal transduction histidine kinase regulating citrate/malate metabolism  43.81 
 
 
361 aa  333  3e-90  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.290644  n/a   
 
 
-
 
NC_013204  Elen_1814  ATP-binding region ATPase domain protein  28.87 
 
 
614 aa  88.2  3e-16  Eggerthella lenta DSM 2243  Bacteria  normal  0.211625  normal  0.35963 
 
 
-
 
NC_010001  Cphy_3117  signal transduction histidine kinase regulating citrate/malate metabolism  27.27 
 
 
342 aa  84.3  0.000000000000003  Clostridium phytofermentans ISDg  Bacteria  normal  0.853672  n/a   
 
 
-
 
NC_011898  Ccel_2269  signal transduction histidine kinase regulating citrate/malate metabolism  22.3 
 
 
442 aa  78.2  0.0000000000003  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2346  signal transduction histidine kinase regulating citrate/malate metabolism  29.1 
 
 
609 aa  77  0.0000000000006  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.600899 
 
 
-
 
NC_013204  Elen_0430  ATP-binding region ATPase domain protein  24.54 
 
 
313 aa  75.1  0.000000000002  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.0000157774 
 
 
-
 
NC_002967  TDE0032  histidine kinase-related ATPase, putative  28.49 
 
 
248 aa  74.7  0.000000000003  Treponema denticola ATCC 35405  Bacteria  hitchhiker  0.00000737644  n/a   
 
 
-
 
NC_013521  Sked_02250  histidine kinase  24.05 
 
 
450 aa  71.6  0.00000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_1751  sensor histidine kinase VirS  23.21 
 
 
440 aa  71.2  0.00000000003  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.0035916  n/a   
 
 
-
 
NC_011830  Dhaf_3688  signal transduction histidine kinase regulating citrate/malate metabolism  25 
 
 
280 aa  70.9  0.00000000004  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_1481  sensor histidine kinase VirS  22.77 
 
 
441 aa  69.3  0.0000000001  Clostridium perfringens SM101  Bacteria  decreased coverage  0.00000161061  n/a   
 
 
-
 
NC_008532  STER_0582  signal transduction protein  25.12 
 
 
431 aa  65.1  0.000000002  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1601  signal transduction histidine kinase regulating citrate/malate metabolism  20.09 
 
 
446 aa  65.5  0.000000002  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.00658825  n/a   
 
 
-
 
NC_013174  Jden_0469  ATP-binding region ATPase domain protein  22.91 
 
 
444 aa  63.5  0.000000006  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0499  sensor histidine kinase  21.33 
 
 
431 aa  60.8  0.00000005  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.0000246195  n/a   
 
 
-
 
NC_013216  Dtox_0471  signal transduction histidine kinase regulating citrate/malate metabolism  30.65 
 
 
225 aa  60.5  0.00000006  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.0687563 
 
 
-
 
NC_010001  Cphy_0975  signal transduction histidine kinase regulating citrate/malate metabolism  25.89 
 
 
242 aa  55.5  0.000002  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0487  sensor histidine kinase  21.1 
 
 
431 aa  52.8  0.00001  Clostridium perfringens SM101  Bacteria  normal  0.0885624  n/a   
 
 
-
 
NC_010501  PputW619_4392  heavy metal sensor signal transduction histidine kinase  24.53 
 
 
470 aa  52.4  0.00002  Pseudomonas putida W619  Bacteria  normal  normal  0.823407 
 
 
-
 
NC_007005  Psyr_1126  heavy metal sensor kinase  25.91 
 
 
454 aa  51.6  0.00003  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.470151  normal  0.220682 
 
 
-
 
NC_010322  PputGB1_0835  heavy metal sensor signal transduction histidine kinase  24.55 
 
 
465 aa  50.4  0.00006  Pseudomonas putida GB-1  Bacteria  normal  0.436383  normal 
 
 
-
 
NC_007484  Noc_1355  Signal transduction histidine kinase  24.28 
 
 
441 aa  50.1  0.00007  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_2401  signal transduction histidine kinase regulating citrate/malate metabolism  22.5 
 
 
456 aa  47.4  0.0005  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.283788  n/a   
 
 
-
 
NC_004578  PSPTO_1306  heavy metal sensor histidine kinase  24.55 
 
 
454 aa  46.6  0.0008  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.175805  n/a   
 
 
-
 
NC_011899  Hore_01630  signal transduction histidine kinase regulating citrate/malate metabolism  23.56 
 
 
325 aa  45.8  0.001  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1749  signal transduction histidine kinase regulating citrate/malate metabolism  26.14 
 
 
534 aa  46.2  0.001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000244457  n/a   
 
 
-
 
NC_007492  Pfl01_4664  heavy metal sensor Signal transduction histidine Kinases (STHK)  23.53 
 
 
454 aa  45.4  0.002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0247649  normal  0.268867 
 
 
-
 
NC_012912  Dd1591_2325  signal transduction histidine kinase regulating citrate/malate metabolism  25 
 
 
531 aa  44.7  0.003  Dickeya zeae Ech1591  Bacteria  normal  0.18048  n/a   
 
 
-
 
NC_013216  Dtox_0401  signal transduction histidine kinase regulating citrate/malate metabolism  26.58 
 
 
479 aa  44.3  0.004  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2021  signal transduction histidine kinase regulating citrate/malate metabolism  24.54 
 
 
534 aa  44.3  0.004  Pectobacterium wasabiae WPP163  Bacteria  normal  0.769355  n/a   
 
 
-
 
NC_009832  Spro_3731  signal transduction histidine kinase regulating citrate/malate metabolism  23.74 
 
 
532 aa  43.5  0.007  Serratia proteamaculans 568  Bacteria  normal  0.95506  normal 
 
 
-
 
NC_013411  GYMC61_2789  signal transduction histidine kinase regulating citrate/malate metabolism  21.62 
 
 
536 aa  43.5  0.008  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010320  Teth514_0499  signal transduction histidine kinase regulating citrate/malate metabolism  23.4 
 
 
287 aa  43.1  0.01  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.000111074  n/a   
 
 
-
 
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