More than 300 homologs were found in PanDaTox collection
for query gene Ccel_1138 on replicon NC_011898
Organism: Clostridium cellulolyticum H10



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011898  Ccel_1138  two component transcriptional regulator, AraC family  100 
 
 		 519 aa  1074    Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_008262  CPR_2056  AraC family DNA-binding response regulator  28.49 
 
 		 507 aa  189  2e-46  Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_008261  CPF_2344  AraC family DNA-binding response regulator  28.49 
 
 		 507 aa  184  4.0000000000000006e-45  Clostridium perfringens ATCC 13124  Bacteria  normal  0.627636  n/a   
 
 
-
 
NC_010001  Cphy_2007  two component AraC family transcriptional regulator  26.96 
 
 		 529 aa  167  5.9999999999999996e-40  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_0944  two component transcriptional regulator, AraC family  27.06 
 
 		 539 aa  163  7e-39  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_0579  two component AraC family transcriptional regulator  25.82 
 
 		 531 aa  148  2.0000000000000003e-34  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_3305  two component transcriptional regulator, AraC family  25.59 
 
 		 513 aa  148  3e-34  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011898  Ccel_1228  two component transcriptional regulator, AraC family  25.8 
 
 		 532 aa  147  4.0000000000000006e-34  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_3156  two component transcriptional regulator, AraC family  26.12 
 
 		 515 aa  142  1.9999999999999998e-32  Geobacillus sp. WCH70  Bacteria  normal  0.949308  n/a   
 
 
-
 
NC_010001  Cphy_1722  two component AraC family transcriptional regulator  24.68 
 
 		 508 aa  142  1.9999999999999998e-32  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_012034  Athe_2055  two component transcriptional regulator, AraC family  27.16 
 
 		 519 aa  135  1.9999999999999998e-30  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_0496  two component AraC family transcriptional regulator  24.6 
 
 		 543 aa  132  1.0000000000000001e-29  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_1645  two component transcriptional regulator, AraC family  25.56 
 
 		 526 aa  130  8.000000000000001e-29  Clostridium cellulolyticum H10  Bacteria  normal  0.168722  n/a   
 
 
-
 
NC_010001  Cphy_1583  two component AraC family transcriptional regulator  24.32 
 
 		 533 aa  128  2.0000000000000002e-28  Clostridium phytofermentans ISDg  Bacteria  normal  0.160886  n/a   
 
 
-
 
NC_010001  Cphy_3282  two component AraC family transcriptional regulator  26.26 
 
 		 535 aa  127  7e-28  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_0149  two component transcriptional regulator, AraC family  23.5 
 
 		 525 aa  116  1.0000000000000001e-24  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_0198  two component transcriptional regulator, AraC family  30.66 
 
 		 534 aa  115  2.0000000000000002e-24  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_2113  two component transcriptional regulator, AraC family  50 
 
 		 538 aa  110  8.000000000000001e-23  Clostridium cellulolyticum H10  Bacteria  normal  0.141697  n/a   
 
 
-
 
NC_010320  Teth514_0399  response regulator receiver protein  41.45 
 
 		 365 aa  108  2e-22  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_2123  two component AraC family transcriptional regulator  24.84 
 
 		 414 aa  107  7e-22  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.331776  n/a   
 
 
-
 
NC_011898  Ccel_1982  two component transcriptional regulator, AraC family  36.13 
 
 		 544 aa  104  4e-21  Clostridium cellulolyticum H10  Bacteria  normal  0.184696  n/a   
 
 
-
 
NC_010001  Cphy_3861  two component AraC family transcriptional regulator  39.2 
 
 		 259 aa  103  8e-21  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_4591  two component transcriptional regulator, AraC family  33.93 
 
 		 265 aa  98.6  2e-19  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_0618  two component AraC family transcriptional regulator  37.1 
 
 		 258 aa  94.7  3e-18  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.00000605397  n/a   
 
 
-
 
NC_011898  Ccel_1251  two component transcriptional regulator, AraC family  41.22 
 
 		 566 aa  94.4  5e-18  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_011661  Dtur_0314  two component transcriptional regulator, AraC family  35.5 
 
 		 494 aa  94  6e-18  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_3034  two component AraC family transcriptional regulator  40.91 
 
 		 556 aa  92.8  1e-17  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00618221  n/a   
 
 
-
 
NC_010001  Cphy_3887  two component AraC family transcriptional regulator  36.75 
 
 		 252 aa  92.4  2e-17  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_012034  Athe_2550  two component transcriptional regulator, AraC family  38.6 
 
 		 502 aa  91.7  3e-17  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_3249  two component transcriptional regulator, AraC family  41.9 
 
 		 531 aa  91.3  4e-17  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_0213  response regulator receiver  40.18 
 
 		 252 aa  90.9  5e-17  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010320  Teth514_1958  response regulator receiver protein  42.48 
 
 		 530 aa  90.9  6e-17  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.000471781  n/a   
 
 
-
 
NC_009487  SaurJH9_0207  response regulator receiver protein  40.18 
 
 		 252 aa  90.5  6e-17  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_011899  Hore_19910  response regulator receiver protein  28.44 
 
 		 386 aa  90.5  7e-17  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_2253  two component AraC family transcriptional regulator  35.11 
 
 		 532 aa  90.5  7e-17  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_012034  Athe_2373  two component transcriptional regulator, AraC family  36.84 
 
 		 252 aa  90.1  9e-17  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_2452  two component transcriptional regulator, AraC family  34 
 
 		 509 aa  89.4  1e-16  Clostridium cellulolyticum H10  Bacteria  normal  0.0693402  n/a   
 
 
-
 
NC_012034  Athe_0600  two component transcriptional regulator, AraC family  40.74 
 
 		 546 aa  89  2e-16  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_0147  two component transcriptional regulator, AraC family  31.66 
 
 		 525 aa  89  2e-16  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_2718  two component transcriptional regulator, AraC family  37.5 
 
 		 259 aa  89.4  2e-16  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_002976  SERP2406  AraC family DNA-binding response regulator  38.39 
 
 		 251 aa  87  7e-16  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_0995  two component transcriptional regulator, AraC family  41.07 
 
 		 542 aa  87  7e-16  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_0864  two component AraC family transcriptional regulator  36.7 
 
 		 503 aa  86.3  0.000000000000001  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_008025  Dgeo_0315  two component LuxR family transcriptional regulator  31.62 
 
 		 214 aa  85.9  0.000000000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  hitchhiker  0.0084678 
 
 
-
 
NC_009012  Cthe_1584  two component AraC family transcriptional regulator  41.53 
 
 		 259 aa  85.5  0.000000000000002  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_3164  two component AraC family transcriptional regulator  37.86 
 
 		 544 aa  85.5  0.000000000000002  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0633186  n/a   
 
 
-
 
NC_010320  Teth514_0224  response regulator receiver protein  40.57 
 
 		 537 aa  85.1  0.000000000000003  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_3306  transcriptional regulator, AraC family  38.05 
 
 		 275 aa  84  0.000000000000006  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_005945  BAS3086  AraC family transcriptional regulator  38.05 
 
 		 275 aa  83.2  0.000000000000009  Bacillus anthracis str. Sterne  Bacteria  decreased coverage  0.0000257264  n/a   
 
 
-
 
NC_005957  BT9727_3030  AraC family transcriptional regulator  38.05 
 
 		 275 aa  83.2  0.000000000000009  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_2426  transcriptional regulator, AraC family  44.04 
 
 		 326 aa  83.2  0.000000000000009  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.971153  normal  0.0916341 
 
 
-
 
NC_007530  GBAA_3328  AraC family transcriptional regulator  38.05 
 
 		 275 aa  83.2  0.000000000000009  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_011080  SNSL254_A4448  AraC family transcriptional regulator  42.42 
 
 		 283 aa  83.6  0.000000000000009  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  normal  0.172214 
 
 
-
 
NC_011083  SeHA_C4445  AraC family transcriptional regulator  42.42 
 
 		 278 aa  83.2  0.00000000000001  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  hitchhiker  0.00788504 
 
 
-
 
NC_012034  Athe_0853  two component transcriptional regulator, AraC family  40.43 
 
 		 509 aa  82.8  0.00000000000001  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_011094  SeSA_A4327  transcriptional regulator, AraC family protein  42.42 
 
 		 278 aa  83.2  0.00000000000001  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011149  SeAg_B4358  transcriptional regulator, AraC family protein  42.42 
 
 		 278 aa  83.2  0.00000000000001  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_011205  SeD_A4522  AraC family transcriptional regulator  42.42 
 
 		 283 aa  83.2  0.00000000000001  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  hitchhiker  0.000425632 
 
 
-
 
NC_011830  Dhaf_1809  transcriptional regulator, AraC family  44.55 
 
 		 273 aa  83.2  0.00000000000001  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000000729156  n/a   
 
 
-
 
CP001509  ECD_03839  predicted DNA-binding transcriptional regulator  42.42 
 
 		 283 aa  81.6  0.00000000000003  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
CP001637  EcDH1_4032  transcriptional regulator, AraC family  42.42 
 
 		 283 aa  81.6  0.00000000000003  Escherichia coli DH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_3148  transcriptional regulator, AraC family  36.11 
 
 		 409 aa  82  0.00000000000003  Bacillus cereus AH820  Bacteria  n/a    normal  0.322003 
 
 
-
 
NC_005957  BT9727_2894  AraC family transcriptional regulator  36.11 
 
 		 409 aa  82  0.00000000000003  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  0.00223441  n/a   
 
 
-
 
NC_012892  B21_03788  hypothetical protein  42.42 
 
 		 283 aa  81.6  0.00000000000003  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
NC_010498  EcSMS35_4400  AraC family transcriptional regulator  42.42 
 
 		 283 aa  81.6  0.00000000000003  Escherichia coli SMS-3-5  Bacteria  normal  0.370971  normal  0.467233 
 
 
-
 
NC_009801  EcE24377A_4492  AraC family transcriptional regulator  42.42 
 
 		 283 aa  81.6  0.00000000000003  Escherichia coli E24377A  Bacteria  normal  0.494011  n/a   
 
 
-
 
NC_009800  EcHS_A4188  AraC family transcriptional regulator  42.42 
 
 		 283 aa  81.6  0.00000000000003  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_010468  EcolC_4062  AraC family transcriptional regulator  42.42 
 
 		 283 aa  81.6  0.00000000000003  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011353  ECH74115_5413  transcriptional regulator, AraC family  42.42 
 
 		 283 aa  81.6  0.00000000000003  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012034  Athe_0102  two component transcriptional regulator, AraC family  33.55 
 
 		 519 aa  81.3  0.00000000000004  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK2976  AraC family transcriptional regulator  37.17 
 
 		 275 aa  81.3  0.00000000000004  Bacillus cereus E33L  Bacteria  hitchhiker  0.00165868  n/a   
 
 
-
 
NC_010001  Cphy_2141  two component AraC family transcriptional regulator  35.11 
 
 		 260 aa  81.3  0.00000000000004  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_3405  two component AraC family transcriptional regulator  38.79 
 
 		 253 aa  81.3  0.00000000000004  Clostridium phytofermentans ISDg  Bacteria  normal  0.100445  n/a   
 
 
-
 
NC_011658  BCAH187_A3298  transcriptional regulator, AraC family  37.17 
 
 		 275 aa  80.9  0.00000000000005  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_2113  two component AraC family transcriptional regulator  31.91 
 
 		 548 aa  80.5  0.00000000000006  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011772  BCG9842_B1984  transcriptional regulator, AraC family  34.53 
 
 		 275 aa  80.5  0.00000000000006  Bacillus cereus G9842  Bacteria  normal  0.626531  normal  1 
 
 
-
 
NC_008751  Dvul_2709  response regulator receiver sensor signal transduction histidine kinase  41.82 
 
 		 501 aa  80.5  0.00000000000006  Desulfovibrio vulgaris DP4  Bacteria  normal  0.710197  normal  0.745824 
 
 
-
 
NC_006274  BCZK4578  AraC family transcriptional regulator  33.33 
 
 		 409 aa  80.5  0.00000000000007  Bacillus cereus E33L  Bacteria  normal  0.0591899  n/a   
 
 
-
 
NC_013205  Aaci_0876  transcriptional regulator, AraC family  40 
 
 		 405 aa  80.5  0.00000000000007  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_013421  Pecwa_4087  two component transcriptional regulator, AraC family  36.67 
 
 		 350 aa  80.5  0.00000000000007  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_005957  BT9727_4562  AraC family transcriptional regulator  34.17 
 
 		 409 aa  79.7  0.0000000000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00627934  n/a   
 
 
-
 
NC_011658  BCAH187_A4969  transcriptional regulator, AraC family  39.56 
 
 		 409 aa  79.7  0.0000000000001  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_0771  two component AraC family transcriptional regulator  33.79 
 
 		 355 aa  80.1  0.0000000000001  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000000862622  n/a   
 
 
-
 
NC_007947  Mfla_0945  two component LuxR family transcriptional regulator  35.59 
 
 		 210 aa  79.7  0.0000000000001  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007947  Mfla_1089  two component LuxR family transcriptional regulator  35.59 
 
 		 210 aa  79.7  0.0000000000001  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008261  CPF_1111  AraC family transcriptional regulator  35.19 
 
 		 506 aa  80.1  0.0000000000001  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.0000128485  n/a   
 
 
-
 
NC_011830  Dhaf_3979  two component transcriptional regulator, AraC family  34.88 
 
 		 348 aa  79.7  0.0000000000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  28.07 
 
 		 224 aa  79.3  0.0000000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009012  Cthe_1824  two component AraC family transcriptional regulator  35.87 
 
 		 362 aa  79  0.0000000000002  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000196685  n/a   
 
 
-
 
NC_004116  SAG1946  DNA-binding response regulator  33.33 
 
 		 257 aa  78.6  0.0000000000003  Streptococcus agalactiae 2603V/R  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A3127  transcriptional regulator, AraC family  35.19 
 
 		 409 aa  78.6  0.0000000000003  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_0841  transcriptional regulator, AraC family  35.92 
 
 		 300 aa  77.8  0.0000000000004  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_013037  Dfer_1330  transcriptional regulator, AraC family  44 
 
 		 326 aa  77.8  0.0000000000004  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.521973  normal  0.989615 
 
 
-
 
NC_011772  BCG9842_B2110  transcriptional regulator, AraC family  35.19 
 
 		 185 aa  77.4  0.0000000000005  Bacillus cereus G9842  Bacteria  normal  0.695339  normal  1 
 
 
-
 
NC_013174  Jden_2514  two component transcriptional regulator, LuxR family  30.25 
 
 		 230 aa  77.4  0.0000000000006  Jonesia denitrificans DSM 20603  Bacteria  normal  0.135771  normal  0.887193 
 
 
-
 
NC_011729  PCC7424_1148  transcriptional regulator, AraC family  30.92 
 
 		 309 aa  77  0.0000000000008  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  26.32 
 
 		 225 aa  76.6  0.0000000000009  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_010180  BcerKBAB4_5603  AraC family transcriptional regulator  32.41 
 
 		 409 aa  76.6  0.000000000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013730  Slin_3263  transcriptional regulator, AraC family  31.76 
 
 		 326 aa  76.3  0.000000000001  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.380473 
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  26.83 
 
 		 216 aa  76.6  0.000000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
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