More than 300 homologs were found in PanDaTox collection
for query gene Caul_3460 on replicon NC_010338
Organism: Caulobacter sp. K31



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010338  Caul_3460  short-chain dehydrogenase/reductase SDR  100 
 
 
269 aa  532  1e-150  Caulobacter sp. K31  Bacteria  normal  0.590645  normal 
 
 
-
 
NC_008463  PA14_63890  putative short-chain dehydrogenase  59.85 
 
 
265 aa  299  3e-80  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5551  putative short-chain dehydrogenase  59.85 
 
 
265 aa  296  2e-79  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1100  short-chain dehydrogenase/reductase SDR  60.38 
 
 
264 aa  294  1e-78  Pseudomonas mendocina ymp  Bacteria  normal  0.576998  normal  0.0165353 
 
 
-
 
NC_010623  Bphy_4200  short-chain dehydrogenase/reductase SDR  54.23 
 
 
271 aa  278  7e-74  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3582  short-chain dehydrogenase/reductase SDR  50.95 
 
 
265 aa  267  1e-70  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.15353 
 
 
-
 
NC_011666  Msil_0380  short-chain dehydrogenase/reductase SDR  51.88 
 
 
265 aa  267  2e-70  Methylocella silvestris BL2  Bacteria  n/a    normal  0.453235 
 
 
-
 
NC_011666  Msil_0129  short-chain dehydrogenase/reductase SDR  51.87 
 
 
271 aa  265  7e-70  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009832  Spro_3183  short-chain dehydrogenase/reductase SDR  54.65 
 
 
260 aa  265  8e-70  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_2059  short-chain dehydrogenase/reductase SDR  54.12 
 
 
260 aa  263  2e-69  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_5270  short-chain dehydrogenase/reductase SDR  55.21 
 
 
262 aa  263  2e-69  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2174  short-chain dehydrogenase/reductase SDR  53.88 
 
 
261 aa  263  3e-69  Shewanella baltica OS223  Bacteria  normal  0.30567  hitchhiker  0.00567391 
 
 
-
 
NC_007951  Bxe_A4474  putative short-chain dehydrogenase/reductase SDR  52.27 
 
 
270 aa  262  4e-69  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000662369 
 
 
-
 
NC_008391  Bamb_4735  short-chain dehydrogenase/reductase SDR  55.21 
 
 
262 aa  262  4e-69  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2478  Short-chain dehydrogenase/reductase SDR  55.73 
 
 
262 aa  259  4e-68  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  51.11 
 
 
270 aa  259  4e-68  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_2278  short-chain dehydrogenase/reductase SDR  52.51 
 
 
260 aa  258  7e-68  Enterobacter sp. 638  Bacteria  normal  normal  0.161761 
 
 
-
 
NC_007005  Psyr_3539  Short-chain dehydrogenase/reductase SDR  52.33 
 
 
262 aa  258  1e-67  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0684522 
 
 
-
 
NC_009621  Smed_5531  short-chain dehydrogenase/reductase SDR  51.92 
 
 
269 aa  257  1e-67  Sinorhizobium medicae WSM419  Bacteria  normal  0.356237  normal  0.14087 
 
 
-
 
NC_004578  PSPTO_1864  oxidoreductase, short chain dehydrogenase/reductase family  53.1 
 
 
262 aa  254  1.0000000000000001e-66  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5185  short-chain dehydrogenase/reductase SDR  52.51 
 
 
285 aa  254  1.0000000000000001e-66  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  50.57 
 
 
281 aa  253  2.0000000000000002e-66  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  50.57 
 
 
281 aa  253  2.0000000000000002e-66  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_002947  PP_2989  short chain dehydrogenase/reductase family oxidoreductase  52.29 
 
 
264 aa  253  3e-66  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0851531 
 
 
-
 
NC_009512  Pput_2703  short-chain dehydrogenase/reductase SDR  51.91 
 
 
264 aa  252  5.000000000000001e-66  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_3723  short-chain dehydrogenase/reductase SDR  50.78 
 
 
266 aa  250  1e-65  Burkholderia ambifaria AMMD  Bacteria  normal  0.662669  normal  0.858524 
 
 
-
 
NC_011071  Smal_2007  short-chain dehydrogenase/reductase SDR  56.59 
 
 
262 aa  249  2e-65  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.511264  normal 
 
 
-
 
NC_007492  Pfl01_2716  Short-chain dehydrogenase/reductase SDR  50.76 
 
 
265 aa  250  2e-65  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.490599 
 
 
-
 
NC_007511  Bcep18194_B1706  Short-chain dehydrogenase/reductase SDR  50.19 
 
 
266 aa  249  2e-65  Burkholderia sp. 383  Bacteria  normal  0.951732  normal 
 
 
-
 
NC_010515  Bcenmc03_3212  short-chain dehydrogenase/reductase SDR  50.19 
 
 
266 aa  248  5e-65  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177624  normal 
 
 
-
 
NC_012858  Rleg_6849  short-chain dehydrogenase/reductase SDR  49.81 
 
 
269 aa  248  8e-65  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.674583 
 
 
-
 
NC_010322  PputGB1_3070  short-chain dehydrogenase/reductase SDR  50.95 
 
 
265 aa  247  1e-64  Pseudomonas putida GB-1  Bacteria  normal  0.0355963  normal 
 
 
-
 
NC_010552  BamMC406_4199  short-chain dehydrogenase/reductase SDR  50.39 
 
 
266 aa  247  2e-64  Burkholderia ambifaria MC40-6  Bacteria  normal  0.308915  normal  0.0922746 
 
 
-
 
NC_010086  Bmul_4300  short-chain dehydrogenase/reductase SDR  49.62 
 
 
266 aa  246  3e-64  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.498015  normal 
 
 
-
 
NC_007492  Pfl01_4040  Short-chain dehydrogenase/reductase SDR  51.7 
 
 
264 aa  245  4e-64  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.128419  normal  0.923094 
 
 
-
 
NC_010505  Mrad2831_1275  short-chain dehydrogenase/reductase SDR  52.51 
 
 
271 aa  240  2e-62  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_4523  short-chain dehydrogenase/reductase SDR  49.23 
 
 
266 aa  239  2.9999999999999997e-62  Cupriavidus metallidurans CH34  Bacteria  normal  0.642907  decreased coverage  0.0040913 
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  48.68 
 
 
264 aa  238  5.999999999999999e-62  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_008048  Sala_0082  short-chain dehydrogenase/reductase SDR  48.5 
 
 
269 aa  238  5.999999999999999e-62  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  51.36 
 
 
266 aa  238  8e-62  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1035  short-chain dehydrogenase/reductase SDR  47.73 
 
 
270 aa  238  1e-61  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0312813  n/a   
 
 
-
 
NC_011365  Gdia_0995  short-chain dehydrogenase/reductase SDR  49.42 
 
 
267 aa  238  1e-61  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  49.61 
 
 
257 aa  236  2e-61  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3491  short-chain dehydrogenase/reductase SDR  48.66 
 
 
287 aa  230  2e-59  Dickeya zeae Ech1591  Bacteria  normal  0.210779  n/a   
 
 
-
 
NC_011757  Mchl_0153  short-chain dehydrogenase/reductase SDR  49.81 
 
 
262 aa  228  9e-59  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.418257  normal  0.135019 
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  48.09 
 
 
263 aa  225  5.0000000000000005e-58  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
NC_010505  Mrad2831_4718  short-chain dehydrogenase/reductase SDR  48.86 
 
 
270 aa  224  1e-57  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0209  short-chain dehydrogenase/reductase SDR  49.42 
 
 
262 aa  223  2e-57  Methylobacterium extorquens PA1  Bacteria  normal  0.128983  normal 
 
 
-
 
NC_009720  Xaut_1294  short-chain dehydrogenase/reductase SDR  48.84 
 
 
266 aa  221  9.999999999999999e-57  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_3566  short-chain dehydrogenase/reductase SDR  51.54 
 
 
269 aa  220  1.9999999999999999e-56  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.138362 
 
 
-
 
NC_007948  Bpro_2349  short-chain dehydrogenase/reductase SDR  44.74 
 
 
266 aa  211  1e-53  Polaromonas sp. JS666  Bacteria  normal  0.341044  normal 
 
 
-
 
NC_012850  Rleg_0887  short-chain dehydrogenase/reductase SDR  44.15 
 
 
266 aa  210  2e-53  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_5551  short-chain dehydrogenase/reductase SDR  44.94 
 
 
266 aa  208  9e-53  Variovorax paradoxus S110  Bacteria  normal  0.614615  n/a   
 
 
-
 
NC_007908  Rfer_0308  short-chain dehydrogenase/reductase SDR  43.45 
 
 
266 aa  204  2e-51  Rhodoferax ferrireducens T118  Bacteria  normal  0.130238  n/a   
 
 
-
 
NC_009436  Ent638_1512  short-chain dehydrogenase/reductase SDR  45.49 
 
 
264 aa  201  1.9999999999999998e-50  Enterobacter sp. 638  Bacteria  normal  normal  0.360234 
 
 
-
 
NC_009485  BBta_5145  putative Short-chain dehydrogenase/reductase SDR  43.75 
 
 
267 aa  198  1.0000000000000001e-49  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.645114  normal  0.0551529 
 
 
-
 
NC_010338  Caul_0512  short-chain dehydrogenase/reductase SDR  42.86 
 
 
269 aa  191  9e-48  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4444  short-chain dehydrogenase/reductase SDR  53.64 
 
 
264 aa  189  4e-47  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.241971  normal 
 
 
-
 
NC_010002  Daci_5779  short-chain dehydrogenase/reductase SDR  42.75 
 
 
268 aa  177  2e-43  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00272439 
 
 
-
 
NC_007511  Bcep18194_B0958  Short-chain dehydrogenase/reductase SDR  41.95 
 
 
263 aa  176  3e-43  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_5566  short-chain dehydrogenase/reductase SDR  45.69 
 
 
199 aa  169  4e-41  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0343056 
 
 
-
 
NC_009664  Krad_2466  short-chain dehydrogenase/reductase SDR  39.33 
 
 
283 aa  164  1.0000000000000001e-39  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_05610  short-chain dehydrogenase of unknown substrate specificity  42.17 
 
 
296 aa  163  2.0000000000000002e-39  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.100134  normal  0.886117 
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  39.02 
 
 
253 aa  153  2.9999999999999998e-36  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  36.68 
 
 
255 aa  150  2e-35  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3647  short-chain dehydrogenase/reductase SDR  43.28 
 
 
255 aa  149  5e-35  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  37.05 
 
 
269 aa  149  5e-35  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  37.78 
 
 
269 aa  146  4.0000000000000006e-34  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_013131  Caci_8914  short-chain dehydrogenase/reductase SDR  40.09 
 
 
255 aa  145  9e-34  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.505504 
 
 
-
 
NC_013947  Snas_6420  short-chain dehydrogenase/reductase SDR  45.37 
 
 
259 aa  145  9e-34  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  40.08 
 
 
259 aa  143  2e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_25790  short-chain dehydrogenase of unknown substrate specificity  37.89 
 
 
282 aa  142  4e-33  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  36.89 
 
 
266 aa  142  7e-33  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  36.89 
 
 
266 aa  141  9.999999999999999e-33  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  42.11 
 
 
258 aa  140  1.9999999999999998e-32  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_014151  Cfla_2979  short-chain dehydrogenase/reductase SDR  40.17 
 
 
269 aa  139  3e-32  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  39.38 
 
 
253 aa  139  4.999999999999999e-32  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1004  short-chain dehydrogenase/reductase SDR  41.13 
 
 
276 aa  138  1e-31  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.118299  decreased coverage  0.00158374 
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  36.55 
 
 
259 aa  136  3.0000000000000003e-31  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  39.8 
 
 
271 aa  134  9.999999999999999e-31  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_009784  VIBHAR_05256  short-chain dehydrogenase/reductase SDR  45.36 
 
 
259 aa  133  1.9999999999999998e-30  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008541  Arth_0289  short-chain dehydrogenase/reductase SDR  35.06 
 
 
258 aa  134  1.9999999999999998e-30  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_35320  short-chain dehydrogenase of unknown substrate specificity  36.92 
 
 
249 aa  134  1.9999999999999998e-30  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.135035  normal  0.316469 
 
 
-
 
NC_007492  Pfl01_5106  Short-chain dehydrogenase/reductase SDR  35.84 
 
 
262 aa  133  3e-30  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.311622  normal  0.753041 
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  33.78 
 
 
262 aa  133  3e-30  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_2426  short-chain dehydrogenase/reductase SDR  38.7 
 
 
269 aa  132  6.999999999999999e-30  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.316114 
 
 
-
 
NC_008726  Mvan_3324  short-chain dehydrogenase/reductase SDR  41.88 
 
 
269 aa  131  1.0000000000000001e-29  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.377978 
 
 
-
 
NC_009338  Mflv_0244  short-chain dehydrogenase/reductase SDR  38.08 
 
 
258 aa  130  2.0000000000000002e-29  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2216  short-chain dehydrogenase/reductase SDR  42.93 
 
 
266 aa  130  3e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2692  short-chain dehydrogenase/reductase SDR  39.57 
 
 
267 aa  129  4.0000000000000003e-29  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0000430049  n/a   
 
 
-
 
NC_013515  Smon_1006  short-chain dehydrogenase/reductase SDR  39.81 
 
 
257 aa  129  4.0000000000000003e-29  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_013235  Namu_5163  short-chain dehydrogenase/reductase SDR  36.99 
 
 
258 aa  129  5.0000000000000004e-29  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0469  short-chain dehydrogenase/reductase SDR  37.55 
 
 
258 aa  129  7.000000000000001e-29  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_0601  oxidoreductase, short chain dehydrogenase/reductase family  40.44 
 
 
258 aa  128  1.0000000000000001e-28  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1619  short-chain dehydrogenase/reductase SDR  43.98 
 
 
271 aa  127  1.0000000000000001e-28  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.61951 
 
 
-
 
NC_008146  Mmcs_0480  short-chain dehydrogenase/reductase SDR  37.12 
 
 
258 aa  127  1.0000000000000001e-28  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0491  short-chain dehydrogenase/reductase SDR  37.12 
 
 
258 aa  127  1.0000000000000001e-28  Mycobacterium sp. KMS  Bacteria  normal  normal  0.354983 
 
 
-
 
NC_007005  Psyr_4572  Short-chain dehydrogenase/reductase SDR  40.98 
 
 
258 aa  127  2.0000000000000002e-28  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_0344  3-oxoacyl-[acyl-carrier protein] reductase  35.33 
 
 
265 aa  127  2.0000000000000002e-28  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  33.47 
 
 
261 aa  127  2.0000000000000002e-28  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
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