More than 300 homologs were found in PanDaTox collection
for query gene Caul_2685 on replicon NC_010338
Organism: Caulobacter sp. K31



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010338  Caul_2685  two component LuxR family transcriptional regulator  100 
 
 
222 aa  448  1e-125  Caulobacter sp. K31  Bacteria  normal  0.120511  normal 
 
 
-
 
NC_009675  Anae109_1385  two component LuxR family transcriptional regulator  46.79 
 
 
212 aa  204  1e-51  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  41.04 
 
 
218 aa  171  1e-41  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal 
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  42.52 
 
 
223 aa  169  2e-41  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  41.36 
 
 
219 aa  167  1e-40  Opitutus terrae PB90-1  Bacteria  normal  normal  0.0121621 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  41.12 
 
 
213 aa  165  4e-40  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_2941  two component transcriptional regulator, LuxR family  41.47 
 
 
219 aa  163  2e-39  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.911135  n/a   
 
 
-
 
NC_008255  CHU_1317  response regulator  37.56 
 
 
220 aa  163  2e-39  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_008146  Mmcs_0590  two component LuxR family transcriptional regulator  40.47 
 
 
215 aa  158  5e-38  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_0581  two component LuxR family transcriptional regulator  40.47 
 
 
215 aa  158  5e-38  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_0603  two component LuxR family transcriptional regulator  40.47 
 
 
215 aa  158  5e-38  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0154  two component transcriptional regulator, LuxR family  39.91 
 
 
244 aa  158  8e-38  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_5079  two component transcriptional regulator, LuxR family  41.28 
 
 
217 aa  157  9e-38  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.525358 
 
 
-
 
NC_013595  Sros_6032  response regulator receiver protein  41.86 
 
 
218 aa  157  1e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  0.53611  normal 
 
 
-
 
NC_008726  Mvan_1646  two component LuxR family transcriptional regulator  39.37 
 
 
219 aa  157  1e-37  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.92254 
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  38.03 
 
 
216 aa  156  2e-37  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  36.07 
 
 
213 aa  154  8e-37  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  34.58 
 
 
212 aa  152  3e-36  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_008009  Acid345_1691  two component LuxR family transcriptional regulator  41.51 
 
 
208 aa  152  3e-36  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0637899 
 
 
-
 
NC_009901  Spea_2299  two component LuxR family transcriptional regulator  38.97 
 
 
221 aa  149  3e-35  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_1700  two component LuxR family transcriptional regulator  37.85 
 
 
213 aa  148  6e-35  Opitutus terrae PB90-1  Bacteria  normal  normal  0.226192 
 
 
-
 
NC_011769  DvMF_1021  two component transcriptional regulator, LuxR family  35.98 
 
 
216 aa  148  6e-35  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.794365 
 
 
-
 
NC_007492  Pfl01_3957  two component LuxR family transcriptional regulator  35.21 
 
 
219 aa  147  1e-34  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_4715  Two component LuxR family transcriptional regulator  34.27 
 
 
264 aa  147  1e-34  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  35.98 
 
 
218 aa  146  2e-34  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  38.68 
 
 
218 aa  146  2e-34  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  36.84 
 
 
214 aa  146  2e-34  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  37.85 
 
 
233 aa  147  2e-34  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_014165  Tbis_3390  LuxR family two component transcriptional regulator  41.78 
 
 
228 aa  146  2e-34  Thermobispora bispora DSM 43833  Bacteria  normal  0.269937  normal 
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  35.85 
 
 
212 aa  146  2e-34  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_2345  two component transcriptional regulator  36.53 
 
 
220 aa  146  2e-34  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.499423  normal  0.134206 
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  35.07 
 
 
215 aa  145  3e-34  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  37.56 
 
 
216 aa  145  4e-34  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009457  VC0395_A0896  LuxR family transcriptional regulator  34.27 
 
 
216 aa  145  6e-34  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  36.15 
 
 
217 aa  145  7e-34  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_009483  Gura_2780  two component LuxR family transcriptional regulator  34.72 
 
 
226 aa  144  1e-33  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1233  two component transcriptional regulator, LuxR family  36.49 
 
 
220 aa  144  1e-33  Conexibacter woesei DSM 14684  Bacteria  normal  0.681342  normal  0.792953 
 
 
-
 
NC_010501  PputW619_1643  two component LuxR family transcriptional regulator  36.79 
 
 
219 aa  144  2e-33  Pseudomonas putida W619  Bacteria  normal  0.118638  normal 
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  37.26 
 
 
218 aa  143  2e-33  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  36.32 
 
 
215 aa  142  3e-33  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  35.68 
 
 
224 aa  142  5e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  36.45 
 
 
232 aa  142  6e-33  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  35.68 
 
 
232 aa  141  8e-33  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  36.79 
 
 
218 aa  141  8e-33  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  36.79 
 
 
218 aa  141  8e-33  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  38.21 
 
 
213 aa  141  9e-33  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3526  DNA-binding response regulator, LuxR family  34.74 
 
 
220 aa  140  1e-32  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0134281  n/a   
 
 
-
 
NC_013440  Hoch_1846  two component transcriptional regulator, LuxR family  36.62 
 
 
212 aa  140  1e-32  Haliangium ochraceum DSM 14365  Bacteria  normal  0.349565  normal  0.2019 
 
 
-
 
NC_008751  Dvul_0670  two component LuxR family transcriptional regulator  34.25 
 
 
216 aa  140  2e-32  Desulfovibrio vulgaris DP4  Bacteria  normal  0.267154  normal 
 
 
-
 
NC_003910  CPS_1406  DNA-binding response regulator  33.64 
 
 
215 aa  140  2e-32  Colwellia psychrerythraea 34H  Bacteria  normal  0.253896  n/a   
 
 
-
 
NC_013730  Slin_0700  two component transcriptional regulator, LuxR family  34.25 
 
 
218 aa  140  2e-32  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00980919  normal  0.316207 
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  38.5 
 
 
214 aa  140  2e-32  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_010322  PputGB1_1667  two component LuxR family transcriptional regulator  35.35 
 
 
219 aa  139  3e-32  Pseudomonas putida GB-1  Bacteria  normal  normal  0.869411 
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  36.02 
 
 
216 aa  139  3e-32  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  35.55 
 
 
216 aa  138  8e-32  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_010644  Emin_0306  two component LuxR family transcriptional regulator  36.67 
 
 
215 aa  137  9e-32  Elusimicrobium minutum Pei191  Bacteria  unclonable  1.61342e-10  hitchhiker  1.59266e-06 
 
 
-
 
NC_009512  Pput_3615  two component LuxR family transcriptional regulator  35.35 
 
 
219 aa  137  9e-32  Pseudomonas putida F1  Bacteria  normal  0.378192  normal  0.274637 
 
 
-
 
NC_008576  Mmc1_2093  two component LuxR family transcriptional regulator  38.68 
 
 
206 aa  137  1e-31  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000328625  normal  0.180863 
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  35.21 
 
 
232 aa  137  1e-31  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_009483  Gura_2782  two component LuxR family transcriptional regulator  36.32 
 
 
214 aa  137  1e-31  Geobacter uraniireducens Rf4  Bacteria  normal  0.834695  n/a   
 
 
-
 
NC_002939  GSU3229  LuxR family DNA-binding response regulator  33.03 
 
 
229 aa  137  1e-31  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0682  LuxR family DNA-binding response regulator  34.6 
 
 
215 aa  137  1e-31  Geobacter sulfurreducens PCA  Bacteria  normal  0.874366  n/a   
 
 
-
 
NC_002947  PP_2126  LuxR family DNA-binding response regulator  35.35 
 
 
219 aa  136  2e-31  Pseudomonas putida KT2440  Bacteria  normal  0.118459  normal  0.107719 
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  34.62 
 
 
224 aa  136  2e-31  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  34.58 
 
 
221 aa  136  2e-31  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0385  two component transcriptional regulator, LuxR family  36.92 
 
 
224 aa  136  2e-31  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR0342  LuxR family DNA-binding response regulator  37.91 
 
 
213 aa  137  2e-31  Brucella suis 1330  Bacteria  normal  0.0601944  n/a   
 
 
-
 
NC_011004  Rpal_1676  two component transcriptional regulator, LuxR family  35.85 
 
 
228 aa  137  2e-31  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0894  two component LuxR family transcriptional regulator  39.61 
 
 
217 aa  137  2e-31  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  36.87 
 
 
221 aa  136  2e-31  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  1.36124e-06 
 
 
-
 
NC_009505  BOV_0358  LuxR family DNA-binding response regulator  37.91 
 
 
213 aa  137  2e-31  Brucella ovis ATCC 25840  Bacteria  normal  0.363  n/a   
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  36.45 
 
 
228 aa  137  2e-31  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1311  two component transcriptional regulator, LuxR family  36.45 
 
 
226 aa  136  3e-31  Thauera sp. MZ1T  Bacteria  normal  0.165019  n/a   
 
 
-
 
NC_003295  RSc2312  two-component response regulator transcription regulator protein  33.33 
 
 
238 aa  135  3e-31  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.500036 
 
 
-
 
NC_007005  Psyr_3299  LuxR response regulator receiver  33.18 
 
 
220 aa  136  3e-31  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0158345  normal 
 
 
-
 
NC_012918  GM21_3105  two component transcriptional regulator, LuxR family  35.65 
 
 
223 aa  136  3e-31  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009632  SaurJH1_2463  response regulator receiver  34.58 
 
 
217 aa  136  3e-31  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3747  two component LuxR family transcriptional regulator  36.02 
 
 
206 aa  136  3e-31  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009487  SaurJH9_2415  two component LuxR family transcriptional regulator  34.58 
 
 
217 aa  136  3e-31  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2290  two component LuxR family transcriptional regulator  34.27 
 
 
215 aa  135  5e-31  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1563  two component LuxR family transcriptional regulator  35.68 
 
 
214 aa  135  7e-31  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.241819 
 
 
-
 
NC_013235  Namu_2635  two component transcriptional regulator, LuxR family  38.5 
 
 
217 aa  134  8e-31  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  5.28497e-05  hitchhiker  0.00476816 
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  34.43 
 
 
214 aa  134  8e-31  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4035  two component LuxR family transcriptional regulator  35.85 
 
 
228 aa  134  9e-31  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  34.13 
 
 
224 aa  134  1e-30  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_1551  two component LuxR family transcriptional regulator  35.19 
 
 
229 aa  134  1e-30  Opitutus terrae PB90-1  Bacteria  normal  normal  0.460798 
 
 
-
 
NC_008700  Sama_1873  response regulator receiver protein  35.32 
 
 
215 aa  134  1e-30  Shewanella amazonensis SB2B  Bacteria  normal  0.56104  normal 
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  34.58 
 
 
214 aa  134  2e-30  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal 
 
 
-
 
NC_011666  Msil_2019  two component transcriptional regulator, LuxR family  37.79 
 
 
223 aa  133  2e-30  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  33.8 
 
 
217 aa  132  3e-30  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_3186  two component LuxR family transcriptional regulator  35.21 
 
 
215 aa  133  3e-30  Opitutus terrae PB90-1  Bacteria  normal  0.0678517  normal 
 
 
-
 
NC_002936  DET0663  LuxR family DNA-binding response regulator  33.65 
 
 
224 aa  132  4e-30  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0697  LuxR family DNA-binding response regulator  33.65 
 
 
224 aa  132  4e-30  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3789  response regulator receiver  36.15 
 
 
228 aa  132  4e-30  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0916709 
 
 
-
 
NC_007973  Rmet_0090  two component LuxR family transcriptional regulator  33.8 
 
 
210 aa  132  4e-30  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_2343  two component LuxR family transcriptional regulator  33.96 
 
 
211 aa  132  6e-30  Dechloromonas aromatica RCB  Bacteria  normal  0.999882  normal  0.0841394 
 
 
-
 
NC_010718  Nther_0648  two component transcriptional regulator, LuxR family  33.8 
 
 
215 aa  132  6e-30  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU0254  LuxR family DNA-binding response regulator  34.6 
 
 
215 aa  131  7e-30  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0121  two component LuxR family transcriptional regulator  33.33 
 
 
210 aa  131  8e-30  Ralstonia eutropha JMP134  Bacteria  normal  0.830531  n/a   
 
 
-
 
NC_010511  M446_5717  two component LuxR family transcriptional regulator  37.07 
 
 
220 aa  130  1e-29  Methylobacterium sp. 4-46  Bacteria  normal  0.873964  hitchhiker  0.00405289 
 
 
-
 
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