More than 300 homologs were found in PanDaTox collection
for query gene Caul_1940 on replicon NC_010338
Organism: Caulobacter sp. K31



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010338  Caul_1940  short-chain dehydrogenase/reductase SDR  100 
 
 
275 aa  558  1e-158  Caulobacter sp. K31  Bacteria  normal  0.320564  normal 
 
 
-
 
NC_009921  Franean1_7149  short-chain dehydrogenase/reductase SDR  44 
 
 
265 aa  190  2.9999999999999997e-47  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0163274 
 
 
-
 
NC_009077  Mjls_0034  short-chain dehydrogenase/reductase SDR  41.18 
 
 
270 aa  176  2e-43  Mycobacterium sp. JLS  Bacteria  normal  normal  0.155625 
 
 
-
 
NC_008146  Mmcs_0044  short-chain dehydrogenase/reductase SDR  40.76 
 
 
270 aa  173  2.9999999999999996e-42  Mycobacterium sp. MCS  Bacteria  normal  0.442455  n/a   
 
 
-
 
NC_008705  Mkms_0053  short-chain dehydrogenase/reductase SDR  40.76 
 
 
270 aa  173  2.9999999999999996e-42  Mycobacterium sp. KMS  Bacteria  normal  0.0110329  normal  0.0245266 
 
 
-
 
NC_009077  Mjls_0285  short-chain dehydrogenase/reductase SDR  39.22 
 
 
264 aa  167  1e-40  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0294  short-chain dehydrogenase/reductase SDR  38.79 
 
 
264 aa  166  2.9999999999999998e-40  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0304  short-chain dehydrogenase/reductase SDR  38.79 
 
 
264 aa  166  2.9999999999999998e-40  Mycobacterium sp. KMS  Bacteria  normal  normal  0.20364 
 
 
-
 
NC_013510  Tcur_3511  short-chain dehydrogenase/reductase SDR  38.43 
 
 
264 aa  155  9e-37  Thermomonospora curvata DSM 43183  Bacteria  normal  0.531457  n/a   
 
 
-
 
NC_009338  Mflv_4545  short-chain dehydrogenase/reductase SDR  35.78 
 
 
261 aa  151  1e-35  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.384179 
 
 
-
 
NC_009338  Mflv_2380  short-chain dehydrogenase/reductase SDR  41.77 
 
 
271 aa  150  2e-35  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_2633  short-chain dehydrogenase/reductase SDR  37.66 
 
 
276 aa  142  9e-33  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.364215  normal 
 
 
-
 
NC_009921  Franean1_1909  short-chain dehydrogenase/reductase SDR  38.94 
 
 
256 aa  137  1e-31  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  34.36 
 
 
271 aa  124  1e-27  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_010511  M446_2996  short-chain dehydrogenase/reductase SDR  40.44 
 
 
268 aa  122  9e-27  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.056073 
 
 
-
 
NC_012917  PC1_2681  short-chain dehydrogenase/reductase SDR  36.45 
 
 
261 aa  121  9.999999999999999e-27  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  30.65 
 
 
255 aa  120  1.9999999999999998e-26  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_4275  oxidoreductase, short-chain dehydrogenase/reductase family  40.54 
 
 
261 aa  117  3e-25  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1556  short-chain dehydrogenase/reductase SDR  37.23 
 
 
261 aa  116  3e-25  Pectobacterium wasabiae WPP163  Bacteria  normal  0.596662  n/a   
 
 
-
 
NC_008009  Acid345_3576  short-chain dehydrogenase/reductase SDR  36.32 
 
 
276 aa  116  3.9999999999999997e-25  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_1889  short-chain dehydrogenase/reductase SDR  34.66 
 
 
264 aa  113  3e-24  Cyanothece sp. PCC 7425  Bacteria  normal  0.0188274  normal 
 
 
-
 
NC_008726  Mvan_3324  short-chain dehydrogenase/reductase SDR  38.05 
 
 
269 aa  109  5e-23  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.377978 
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  31.64 
 
 
264 aa  108  9.000000000000001e-23  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_013132  Cpin_5008  short-chain dehydrogenase/reductase SDR  31.9 
 
 
298 aa  107  1e-22  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0468951  hitchhiker  0.00252787 
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  32.41 
 
 
261 aa  106  5e-22  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  38.25 
 
 
259 aa  105  1e-21  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_013730  Slin_6445  short-chain dehydrogenase/reductase SDR  32.33 
 
 
272 aa  105  1e-21  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  32.02 
 
 
261 aa  105  1e-21  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_003295  RSc2321  dehydrogenase/reductase oxidoreductase protein  35 
 
 
275 aa  104  2e-21  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.195083 
 
 
-
 
NC_007005  Psyr_4572  Short-chain dehydrogenase/reductase SDR  36.7 
 
 
258 aa  103  2e-21  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_3249  short-chain dehydrogenase/reductase SDR  36.05 
 
 
258 aa  102  5e-21  Caulobacter sp. K31  Bacteria  normal  normal  0.559348 
 
 
-
 
NC_009077  Mjls_0177  short-chain dehydrogenase/reductase SDR  38.95 
 
 
262 aa  102  6e-21  Mycobacterium sp. JLS  Bacteria  normal  normal  0.721122 
 
 
-
 
NC_008392  Bamb_6118  short-chain dehydrogenase/reductase SDR  34.42 
 
 
275 aa  102  6e-21  Burkholderia ambifaria AMMD  Bacteria  normal  0.304156  normal  0.200034 
 
 
-
 
NC_009784  VIBHAR_05256  short-chain dehydrogenase/reductase SDR  36.61 
 
 
259 aa  102  7e-21  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  32.61 
 
 
266 aa  102  7e-21  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_013132  Cpin_4109  short-chain dehydrogenase/reductase SDR  37.16 
 
 
269 aa  101  1e-20  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.00421935 
 
 
-
 
NC_007511  Bcep18194_B0958  Short-chain dehydrogenase/reductase SDR  38.81 
 
 
263 aa  100  2e-20  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0188  short-chain dehydrogenase/reductase SDR  38.42 
 
 
262 aa  100  2e-20  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0197  short-chain dehydrogenase/reductase SDR  38.42 
 
 
262 aa  100  2e-20  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_007512  Plut_1969  short chain dehydrogenase/reductase family oxidoreductase  35.27 
 
 
260 aa  100  3e-20  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  33.33 
 
 
266 aa  99.8  4e-20  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  35.29 
 
 
258 aa  99.4  6e-20  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_013730  Slin_0497  short-chain dehydrogenase/reductase SDR  31.09 
 
 
360 aa  99  7e-20  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_0281  short-chain dehydrogenase/reductase SDR  29.8 
 
 
255 aa  99  8e-20  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.000634692  hitchhiker  0.00117931 
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  30.43 
 
 
262 aa  98.6  9e-20  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2216  short-chain dehydrogenase/reductase SDR  35.04 
 
 
266 aa  98.6  1e-19  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2989  short chain dehydrogenase/reductase family oxidoreductase  36.45 
 
 
264 aa  97.8  2e-19  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0851531 
 
 
-
 
NC_013517  Sterm_2330  short-chain dehydrogenase/reductase SDR  29.44 
 
 
257 aa  97.8  2e-19  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.000620196  n/a   
 
 
-
 
NC_011729  PCC7424_1836  short-chain dehydrogenase/reductase SDR  34.78 
 
 
260 aa  97.4  2e-19  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008391  Bamb_4735  short-chain dehydrogenase/reductase SDR  35.94 
 
 
262 aa  97.4  2e-19  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  34.92 
 
 
264 aa  97.4  2e-19  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_0601  oxidoreductase, short chain dehydrogenase/reductase family  31.42 
 
 
258 aa  97.1  3e-19  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  33.49 
 
 
257 aa  96.7  4e-19  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_2044  short-chain dehydrogenase/reductase SDR  33.72 
 
 
260 aa  96.3  5e-19  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.756544 
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  37.5 
 
 
267 aa  94.7  1e-18  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_5106  Short-chain dehydrogenase/reductase SDR  32.88 
 
 
262 aa  94.7  1e-18  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.311622  normal  0.753041 
 
 
-
 
NC_010831  Cphamn1_0312  short-chain dehydrogenase/reductase SDR  29.3 
 
 
261 aa  94.7  1e-18  Chlorobium phaeobacteroides BS1  Bacteria  hitchhiker  0.0000113464  decreased coverage  0.000120518 
 
 
-
 
NC_009512  Pput_2703  short-chain dehydrogenase/reductase SDR  35.47 
 
 
264 aa  95.1  1e-18  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0423  short-chain dehydrogenase/reductase SDR  34.02 
 
 
259 aa  94.4  2e-18  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.83571  n/a   
 
 
-
 
NC_014158  Tpau_1341  short-chain dehydrogenase/reductase SDR  38.15 
 
 
268 aa  94.7  2e-18  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_5270  short-chain dehydrogenase/reductase SDR  35.48 
 
 
262 aa  94.4  2e-18  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_4642  short-chain dehydrogenase/reductase SDR  32.11 
 
 
264 aa  93.6  3e-18  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000179752 
 
 
-
 
NC_010803  Clim_0189  short-chain dehydrogenase/reductase SDR  36.07 
 
 
267 aa  93.6  3e-18  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.00000709968  n/a   
 
 
-
 
NC_009953  Sare_1619  short-chain dehydrogenase/reductase SDR  36.36 
 
 
271 aa  93.6  3e-18  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.61951 
 
 
-
 
NC_013165  Shel_18580  short-chain dehydrogenase of unknown substrate specificity  35.29 
 
 
258 aa  93.2  4e-18  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.489964  normal 
 
 
-
 
NC_010511  M446_3398  short-chain dehydrogenase/reductase SDR  37.84 
 
 
265 aa  92.8  5e-18  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.162957 
 
 
-
 
NC_011894  Mnod_4423  short-chain dehydrogenase/reductase SDR  38.92 
 
 
276 aa  92.8  5e-18  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.235547  n/a   
 
 
-
 
NC_007413  Ava_1572  Short-chain dehydrogenase/reductase SDR  30 
 
 
263 aa  92.8  5e-18  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.577459 
 
 
-
 
NC_009664  Krad_2814  short-chain dehydrogenase/reductase SDR  33.06 
 
 
260 aa  92.4  8e-18  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.563613  normal 
 
 
-
 
NC_009485  BBta_0274  short chain dehydrogenase/reductase family protein  34.93 
 
 
259 aa  92  8e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_1539  short-chain dehydrogenase/reductase SDR  35.41 
 
 
223 aa  91.3  1e-17  Acidiphilium cryptum JF-5  Bacteria  normal  0.382635  n/a   
 
 
-
 
NC_009439  Pmen_1100  short-chain dehydrogenase/reductase SDR  33.06 
 
 
264 aa  92  1e-17  Pseudomonas mendocina ymp  Bacteria  normal  0.576998  normal  0.0165353 
 
 
-
 
NC_007958  RPD_0689  short-chain dehydrogenase/reductase SDR  37.7 
 
 
259 aa  91.7  1e-17  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_0477  short-chain dehydrogenase/reductase SDR  36.22 
 
 
256 aa  91.3  2e-17  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2692  short-chain dehydrogenase/reductase SDR  36.36 
 
 
267 aa  90.9  2e-17  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0000430049  n/a   
 
 
-
 
NC_014248  Aazo_3911  short-chain dehydrogenase/reductase SDR  31.05 
 
 
267 aa  90.9  2e-17  'Nostoc azollae' 0708  Bacteria  normal  0.322734  n/a   
 
 
-
 
NC_011060  Ppha_2686  short-chain dehydrogenase/reductase SDR  31.08 
 
 
258 aa  90.5  3e-17  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.00673203  n/a   
 
 
-
 
NC_011666  Msil_0380  short-chain dehydrogenase/reductase SDR  31.3 
 
 
265 aa  89.7  4e-17  Methylocella silvestris BL2  Bacteria  n/a    normal  0.453235 
 
 
-
 
NC_009636  Smed_1269  short-chain dehydrogenase/reductase SDR  38.74 
 
 
294 aa  89.4  7e-17  Sinorhizobium medicae WSM419  Bacteria  normal  0.618635  normal  0.87927 
 
 
-
 
NC_013730  Slin_2448  short-chain dehydrogenase/reductase SDR  28.05 
 
 
257 aa  89.4  7e-17  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0351  short-chain dehydrogenase/reductase SDR  34.97 
 
 
291 aa  89  9e-17  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0779  short-chain dehydrogenase/reductase SDR  35.76 
 
 
286 aa  88.2  1e-16  Kineococcus radiotolerans SRS30216  Bacteria  hitchhiker  0.00749167  decreased coverage  0.00042824 
 
 
-
 
NC_013132  Cpin_3329  short-chain dehydrogenase/reductase SDR  31.15 
 
 
256 aa  88.6  1e-16  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.227726  hitchhiker  0.00265893 
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  32.51 
 
 
252 aa  87.8  2e-16  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  33.64 
 
 
258 aa  87.4  2e-16  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_007778  RPB_0113  short-chain dehydrogenase/reductase SDR  36.61 
 
 
259 aa  87.8  2e-16  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.886287  normal 
 
 
-
 
NC_009921  Franean1_6469  short-chain dehydrogenase/reductase SDR  33.33 
 
 
263 aa  87  3e-16  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0477636 
 
 
-
 
NC_007925  RPC_1224  short-chain dehydrogenase/reductase SDR  30.17 
 
 
261 aa  86.7  4e-16  Rhodopseudomonas palustris BisB18  Bacteria  normal  hitchhiker  0.000362575 
 
 
-
 
NC_007492  Pfl01_4040  Short-chain dehydrogenase/reductase SDR  32.89 
 
 
264 aa  85.9  6e-16  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.128419  normal  0.923094 
 
 
-
 
NC_008228  Patl_0906  short-chain dehydrogenase/reductase SDR  27.13 
 
 
273 aa  85.9  6e-16  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.127379  n/a   
 
 
-
 
NC_009656  PSPA7_5551  putative short-chain dehydrogenase  35.05 
 
 
265 aa  85.9  7e-16  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4774  short-chain dehydrogenase/reductase SDR  31.34 
 
 
260 aa  85.9  7e-16  Pseudomonas putida W619  Bacteria  normal  normal  0.45506 
 
 
-
 
NC_009441  Fjoh_3794  short-chain dehydrogenase/reductase SDR  26.78 
 
 
262 aa  85.5  8e-16  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3491  short-chain dehydrogenase/reductase SDR  33.33 
 
 
287 aa  85.5  9e-16  Dickeya zeae Ech1591  Bacteria  normal  0.210779  n/a   
 
 
-
 
NC_013061  Phep_3131  short-chain dehydrogenase/reductase SDR  30.43 
 
 
258 aa  85.5  9e-16  Pedobacter heparinus DSM 2366  Bacteria  normal  0.859893  normal 
 
 
-
 
NC_006694  CNI00690  ketoreductase, putative  32.47 
 
 
361 aa  84.7  0.000000000000001  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_4718  short-chain dehydrogenase/reductase SDR  37.36 
 
 
270 aa  84.7  0.000000000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_1536  short-chain dehydrogenase/reductase SDR  29.24 
 
 
260 aa  85.1  0.000000000000001  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_6133  short-chain dehydrogenase/reductase SDR  31.69 
 
 
263 aa  85.1  0.000000000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_4098  short-chain dehydrogenase/reductase SDR  33.64 
 
 
268 aa  85.1  0.000000000000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.230051  normal 
 
 
-
 
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