More than 300 homologs were found in PanDaTox collection
for query gene Cag_0014 on replicon NC_007514
Organism: Chlorobium chlorochromatii CaD3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007514  Cag_0014  Holliday junction resolvase YqgF  100 
 
 
140 aa  288  2e-77  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.639301  n/a   
 
 
-
 
NC_011060  Ppha_2805  Holliday junction resolvase YqgF  63.97 
 
 
145 aa  188  2.9999999999999997e-47  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_2406  Holliday junction resolvase YqgF  61.03 
 
 
142 aa  174  3e-43  Chlorobium limicola DSM 245  Bacteria  normal  0.406379  n/a   
 
 
-
 
NC_008639  Cpha266_2570  Holliday junction resolvase YqgF  54.41 
 
 
142 aa  163  9e-40  Chlorobium phaeobacteroides DSM 266  Bacteria  hitchhiker  0.00347975  n/a   
 
 
-
 
NC_010831  Cphamn1_2429  Holliday junction resolvase YqgF  51.49 
 
 
144 aa  147  5e-35  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_2162  Holliday junction resolvase YqgF  47.76 
 
 
142 aa  144  3e-34  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.337322  normal 
 
 
-
 
NC_007512  Plut_2047  Holliday junction resolvase YqgF  51.85 
 
 
141 aa  143  6e-34  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_0873  Holliday junction resolvase YqgF  41.18 
 
 
145 aa  99.4  1e-20  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013162  Coch_1395  Holliday junction resolvase YqgF  35.88 
 
 
143 aa  95.5  2e-19  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_5430  Holliday junction resolvase YqgF  34.81 
 
 
142 aa  95.1  3e-19  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_1903  Holliday junction resolvase YqgF  35.82 
 
 
136 aa  92.4  2e-18  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_0074  Holliday junction resolvase YqgF  34.81 
 
 
138 aa  92  2e-18  Pedobacter heparinus DSM 2366  Bacteria  normal  0.974882  normal 
 
 
-
 
NC_014230  CA2559_06155  Holliday junction resolvase-like protein  35.88 
 
 
135 aa  91.7  3e-18  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_010830  Aasi_1327  Holliday junction resolvase-like protein  37.04 
 
 
141 aa  89  2e-17  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal  0.513618 
 
 
-
 
NC_008255  CHU_0692  Holliday junction resolvase-like protein  31.85 
 
 
152 aa  89  2e-17  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.458381 
 
 
-
 
NC_013037  Dfer_4051  Holliday junction resolvase YqgF  31.11 
 
 
137 aa  87  9e-17  Dyadobacter fermentans DSM 18053  Bacteria  normal  hitchhiker  0.00000789262 
 
 
-
 
NC_009441  Fjoh_2528  Holliday junction resolvase-like protein  31.85 
 
 
138 aa  86.3  1e-16  Flavobacterium johnsoniae UW101  Bacteria  normal  0.551236  n/a   
 
 
-
 
NC_013205  Aaci_2024  Holliday junction resolvase YqgF  35.29 
 
 
144 aa  84.3  5e-16  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.330713  n/a   
 
 
-
 
NC_013411  GYMC61_0964  Holliday junction resolvase YqgF  36.88 
 
 
138 aa  79.3  0.00000000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008009  Acid345_0556  Holliday junction resolvase YqgF  37.59 
 
 
153 aa  78.6  0.00000000000003  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.901255  normal  0.0480752 
 
 
-
 
NC_012793  GWCH70_2488  Holliday junction resolvase YqgF  36.17 
 
 
138 aa  76.6  0.00000000000009  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000680199  n/a   
 
 
-
 
NC_010718  Nther_1778  Holliday junction resolvase YqgF  37.23 
 
 
141 aa  76.6  0.0000000000001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.140554 
 
 
-
 
NC_008346  Swol_0470  Holliday junction resolvase YqgF  37.78 
 
 
141 aa  75.5  0.0000000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.00000000599692  n/a   
 
 
-
 
NC_002950  PG2202  Holliday junction resolvase-like protein  31.58 
 
 
138 aa  74.7  0.0000000000004  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_009253  Dred_0775  Holliday junction resolvase YqgF  35.56 
 
 
137 aa  73.6  0.0000000000009  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000000463594  n/a   
 
 
-
 
NC_013173  Dbac_1790  Holliday junction resolvase YqgF  39.13 
 
 
133 aa  72.8  0.000000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  decreased coverage  0.00751815  n/a   
 
 
-
 
NC_009767  Rcas_3713  Holliday junction resolvase YqgF  30.43 
 
 
146 aa  73.2  0.000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0658941  hitchhiker  0.00476179 
 
 
-
 
NC_009523  RoseRS_3225  Holliday junction resolvase YqgF  30.43 
 
 
141 aa  72.8  0.000000000002  Roseiflexus sp. RS-1  Bacteria  normal  0.387387  normal 
 
 
-
 
NC_011899  Hore_05800  Holliday junction resolvase YqgF  34.31 
 
 
140 aa  72.4  0.000000000002  Halothermothrix orenii H 168  Bacteria  normal  0.209228  n/a   
 
 
-
 
NC_013522  Taci_1032  Holliday junction resolvase YqgF  33.09 
 
 
142 aa  72.4  0.000000000002  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2239  Holliday junction resolvase-like protein  35.04 
 
 
142 aa  71.6  0.000000000003  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.0000140275  n/a   
 
 
-
 
NC_007644  Moth_1640  Holliday junction resolvase YqgF  34.56 
 
 
140 aa  70.9  0.000000000005  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.278901  normal  0.163549 
 
 
-
 
NC_013216  Dtox_2265  Holliday junction resolvase YqgF  35.29 
 
 
139 aa  71.2  0.000000000005  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  hitchhiker  0.0000233904 
 
 
-
 
NC_011658  BCAH187_A4519  Holliday junction resolvase-like protein  33.57 
 
 
137 aa  69.7  0.00000000001  Bacillus cereus AH187  Bacteria  hitchhiker  0.000203205  n/a   
 
 
-
 
NC_003909  BCE_4469  Holliday junction resolvase-like protein  33.57 
 
 
137 aa  69.3  0.00000000002  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.000000240455  n/a   
 
 
-
 
NC_009674  Bcer98_3099  Holliday junction resolvase-like protein  35 
 
 
137 aa  69.3  0.00000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00212776  n/a   
 
 
-
 
NC_013515  Smon_0417  Holliday junction resolvase YqgF  31.94 
 
 
142 aa  69.3  0.00000000002  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_005945  BAS4282  Holliday junction resolvase-like protein  33.57 
 
 
137 aa  69.3  0.00000000002  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.000000036093  n/a   
 
 
-
 
NC_005957  BT9727_4119  Holliday junction resolvase-like protein  33.57 
 
 
137 aa  69.3  0.00000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  3.61572e-18  n/a   
 
 
-
 
NC_006274  BCZK4130  Holliday junction resolvase-like protein  33.57 
 
 
137 aa  69.3  0.00000000002  Bacillus cereus E33L  Bacteria  unclonable  0.000000000000238321  n/a   
 
 
-
 
NC_007530  GBAA_4614  Holliday junction resolvase-like protein  33.57 
 
 
137 aa  69.3  0.00000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  decreased coverage  0.0000000000846091  n/a   
 
 
-
 
NC_011773  BCAH820_4466  Holliday junction resolvase-like protein  33.57 
 
 
137 aa  69.3  0.00000000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000283196 
 
 
-
 
NC_011725  BCB4264_A4506  Holliday junction resolvase-like protein  33.57 
 
 
137 aa  68.6  0.00000000003  Bacillus cereus B4264  Bacteria  normal  0.860088  n/a   
 
 
-
 
NC_011830  Dhaf_3562  Holliday junction resolvase-like protein  33.08 
 
 
142 aa  68.2  0.00000000003  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000000000000329746  n/a   
 
 
-
 
NC_007947  Mfla_2100  Holliday junction resolvase-like protein  33.58 
 
 
146 aa  68.6  0.00000000003  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B0730  Holliday junction resolvase-like protein  33.57 
 
 
137 aa  68.6  0.00000000003  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000542239  normal 
 
 
-
 
NC_013385  Adeg_1438  Holliday junction resolvase YqgF  36.23 
 
 
146 aa  68.2  0.00000000004  Ammonifex degensii KC4  Bacteria  normal  0.0335959  n/a   
 
 
-
 
NC_014210  Ndas_3074  Holliday junction resolvase YqgF  32.86 
 
 
161 aa  68.2  0.00000000004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.459764 
 
 
-
 
NC_011831  Cagg_0094  Holliday junction resolvase YqgF  34.75 
 
 
142 aa  68.2  0.00000000004  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.0018567  normal 
 
 
-
 
NC_013595  Sros_6093  endonuclease involved in recombination-like protein  32.84 
 
 
163 aa  67.8  0.00000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0746227  normal 
 
 
-
 
NC_014248  Aazo_4148  Holliday junction resolvase YqgF  32.33 
 
 
158 aa  67.4  0.00000000006  'Nostoc azollae' 0708  Bacteria  normal  0.927535  n/a   
 
 
-
 
NC_007413  Ava_3804  Holliday junction resolvase-like protein  31.43 
 
 
151 aa  67  0.00000000007  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0796335  normal 
 
 
-
 
NC_009012  Cthe_0153  Holliday junction resolvase-like protein  33.33 
 
 
141 aa  67.4  0.00000000007  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0185653  n/a   
 
 
-
 
NC_013757  Gobs_3157  Holliday junction resolvase YqgF  34.78 
 
 
222 aa  67  0.00000000008  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.588989  n/a   
 
 
-
 
NC_008527  LACR_0138  Holliday junction resolvase-like protein  31.21 
 
 
143 aa  66.2  0.0000000001  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1491  Holliday junction resolvase-like protein  33.09 
 
 
139 aa  66.6  0.0000000001  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.0000000000748947  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4233  Holliday junction resolvase-like protein  33.57 
 
 
137 aa  66.6  0.0000000001  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000272031  n/a   
 
 
-
 
NC_011661  Dtur_1024  Holliday junction resolvase YqgF  29.63 
 
 
141 aa  65.9  0.0000000002  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_5401  Holliday junction resolvase YqgF  30.94 
 
 
139 aa  65.9  0.0000000002  Haliangium ochraceum DSM 14365  Bacteria  normal  0.616966  normal  0.68966 
 
 
-
 
NC_007604  Synpcc7942_2398  Holliday junction resolvase-like protein  30.77 
 
 
149 aa  65.1  0.0000000003  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0366153  hitchhiker  0.00151496 
 
 
-
 
NC_008312  Tery_4379  Holliday junction resolvase-like protein  30.15 
 
 
149 aa  65.1  0.0000000003  Trichodesmium erythraeum IMS101  Bacteria  normal  0.556882  normal  0.251804 
 
 
-
 
NC_011883  Ddes_0031  Holliday junction resolvase YqgF  37.31 
 
 
140 aa  65.1  0.0000000003  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_010655  Amuc_1191  Holliday junction resolvase YqgF  29.32 
 
 
141 aa  63.9  0.0000000007  Akkermansia muciniphila ATCC BAA-835  Bacteria  hitchhiker  0.0000237997  normal 
 
 
-
 
NC_011138  MADE_03294  Holliday junction resolvase-like protein  30.15 
 
 
143 aa  63.5  0.0000000009  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.659098  n/a   
 
 
-
 
NC_009972  Haur_3633  Holliday junction resolvase YqgF  35.71 
 
 
158 aa  63.5  0.0000000009  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0314  Holliday junction resolvase YqgF  36.3 
 
 
144 aa  62.8  0.000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_0423  Holliday junction resolvase-like protein  31.39 
 
 
143 aa  63.2  0.000000001  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_013203  Apar_0458  Holliday junction resolvase YqgF  32.12 
 
 
140 aa  62.4  0.000000002  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_2297  Holliday junction resolvase YqgF  32.61 
 
 
150 aa  61.6  0.000000003  Clostridium phytofermentans ISDg  Bacteria  normal  0.470334  n/a   
 
 
-
 
NC_008228  Patl_1154  Holliday junction resolvase YqgF  31.11 
 
 
143 aa  62  0.000000003  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_2031  Holliday junction resolvase-like protein  30.88 
 
 
137 aa  61.6  0.000000003  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_1748  Holliday junction resolvase-like protein  30.88 
 
 
137 aa  61.6  0.000000003  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1180  Holliday junction resolvase-like protein  29.08 
 
 
142 aa  61.2  0.000000004  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_3061  hypothetical protein  32.85 
 
 
143 aa  61.2  0.000000004  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_2668  Holliday junction resolvase YqgF  32.85 
 
 
143 aa  61.2  0.000000004  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.933138  normal 
 
 
-
 
NC_013517  Sterm_2739  Holliday junction resolvase YqgF  27.74 
 
 
137 aa  61.2  0.000000005  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0088  Holliday junction resolvase YqgF  31.94 
 
 
149 aa  61.2  0.000000005  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_1336  Holliday junction resolvase-like protein  31.62 
 
 
139 aa  60.8  0.000000006  Shewanella woodyi ATCC 51908  Bacteria  normal  0.164432  hitchhiker  0.000378103 
 
 
-
 
NC_008699  Noca_2408  Holliday junction resolvase-like protein  30.94 
 
 
156 aa  60.8  0.000000006  Nocardioides sp. JS614  Bacteria  normal  0.332292  n/a   
 
 
-
 
NC_013739  Cwoe_3035  Holliday junction resolvase YqgF  33.33 
 
 
133 aa  60.5  0.000000008  Conexibacter woesei DSM 14684  Bacteria  normal  0.0101605  normal  0.0662243 
 
 
-
 
NC_013223  Dret_1130  Holliday junction resolvase YqgF  32.84 
 
 
142 aa  60.1  0.000000009  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_008819  NATL1_08311  endonuclease  32.84 
 
 
144 aa  60.1  0.00000001  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.0380749  normal  0.23212 
 
 
-
 
NC_009831  Ssed_1236  Holliday junction resolvase-like protein  31.11 
 
 
139 aa  60.1  0.00000001  Shewanella sediminis HAW-EB3  Bacteria  normal  0.578906  normal  0.405452 
 
 
-
 
NC_009901  Spea_1131  Holliday junction resolvase-like protein  30.43 
 
 
141 aa  60.1  0.00000001  Shewanella pealeana ATCC 700345  Bacteria  normal  0.111461  n/a   
 
 
-
 
NC_008578  Acel_1329  Holliday junction resolvase YqgF  31.39 
 
 
173 aa  59.7  0.00000001  Acidothermus cellulolyticus 11B  Bacteria  normal  0.0531797  normal  0.27422 
 
 
-
 
NC_006369  lpl0621  Holliday junction resolvase-like protein  29.1 
 
 
139 aa  59.3  0.00000002  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007335  PMN2A_0199  Holliday junction resolvase YqgF  32.09 
 
 
144 aa  59.3  0.00000002  Prochlorococcus marinus str. NATL2A  Bacteria  normal  0.102311  n/a   
 
 
-
 
NC_013947  Snas_3877  Holliday junction resolvase YqgF  29.25 
 
 
151 aa  58.9  0.00000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.843962  normal 
 
 
-
 
NC_008345  Sfri_2849  Holliday junction resolvase-like protein  31.16 
 
 
139 aa  58.9  0.00000002  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_3530  Holliday junction resolvase YqgF  30.66 
 
 
145 aa  59.3  0.00000002  Opitutus terrae PB90-1  Bacteria  normal  0.390146  normal 
 
 
-
 
NC_009513  Lreu_0535  Holliday junction resolvase-like protein  26.62 
 
 
147 aa  58.5  0.00000003  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000331559  n/a   
 
 
-
 
NC_013422  Hneap_1355  Holliday junction resolvase YqgF  28.89 
 
 
165 aa  58.5  0.00000003  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3664  Holliday junction resolvase-like protein  31.16 
 
 
165 aa  58.5  0.00000003  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_2326  Holliday junction resolvase-like protein  32.09 
 
 
151 aa  58.5  0.00000003  Burkholderia phymatum STM815  Bacteria  normal  normal  0.0635951 
 
 
-
 
NC_008048  Sala_0925  Holliday junction resolvase YqgF  31.91 
 
 
152 aa  58.5  0.00000003  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.233016  normal 
 
 
-
 
NC_011729  PCC7424_3098  Holliday junction resolvase-like protein  29.2 
 
 
151 aa  58.2  0.00000003  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011884  Cyan7425_2514  Holliday junction resolvase-like protein  28.68 
 
 
150 aa  58.2  0.00000004  Cyanothece sp. PCC 7425  Bacteria  normal  0.36708  normal 
 
 
-
 
NC_010730  SYO3AOP1_0474  Holliday junction resolvase YqgF  28.68 
 
 
145 aa  58.2  0.00000004  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00800439  n/a   
 
 
-
 
NC_012034  Athe_1211  Holliday junction resolvase YqgF  29.41 
 
 
138 aa  57.8  0.00000005  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.271637  n/a   
 
 
-
 
NC_007760  Adeh_1232  Holliday junction resolvase-like protein  31.39 
 
 
137 aa  57.8  0.00000005  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
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