More than 300 homologs were found in PanDaTox collection
for query gene Caci_7618 on replicon NC_013131
Organism: Catenulispora acidiphila DSM 44928



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013131  Caci_7618  cell envelope-related transcriptional attenuator  100 
 
 
643 aa  1290    Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  37.64 
 
 
400 aa  223  8e-57  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4096  cell envelope-related transcriptional attenuator  35.73 
 
 
468 aa  214  2.9999999999999995e-54  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  39.68 
 
 
506 aa  211  3e-53  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_013595  Sros_1363  Transcriptional regulator-like protein  35.59 
 
 
530 aa  204  4e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.640186  normal 
 
 
-
 
NC_013510  Tcur_0624  cell envelope-related transcriptional attenuator  32.65 
 
 
481 aa  202  1.9999999999999998e-50  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7619  cell envelope-related transcriptional attenuator  38.91 
 
 
379 aa  201  3.9999999999999996e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_3302  cell envelope-related transcriptional attenuator  35.35 
 
 
406 aa  200  7e-50  Nocardioides sp. JS614  Bacteria  normal  0.0160587  n/a   
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  34.28 
 
 
481 aa  198  3e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  30.56 
 
 
478 aa  194  6e-48  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7541  cell envelope-related transcriptional attenuator  35.02 
 
 
540 aa  189  1e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.371514 
 
 
-
 
NC_012669  Bcav_1166  cell envelope-related protein transcriptional attenuator  36.58 
 
 
395 aa  187  4e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1167  cell envelope-related protein transcriptional attenuator  34.13 
 
 
417 aa  181  4e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  32.19 
 
 
468 aa  181  4.999999999999999e-44  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_0126  cell envelope-related transcriptional attenuator  29.9 
 
 
499 aa  180  5.999999999999999e-44  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013530  Xcel_2594  cell envelope-related transcriptional attenuator  34.87 
 
 
442 aa  179  1e-43  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0728  cell envelope-related transcriptional attenuator  32.58 
 
 
618 aa  177  4e-43  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0188197 
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  30.1 
 
 
480 aa  176  9e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_012669  Bcav_3844  cell envelope-related protein transcriptional attenuator  33.43 
 
 
373 aa  174  5e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_3920  cell envelope-related function transcriptional attenuator, LytR/CpsA family  30.72 
 
 
734 aa  167  6.9999999999999995e-40  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  32.35 
 
 
453 aa  166  9e-40  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_007777  Francci3_3496  cell envelope-related transcriptional attenuator  33.11 
 
 
486 aa  165  2.0000000000000002e-39  Frankia sp. CcI3  Bacteria  normal  0.625789  normal  0.409021 
 
 
-
 
NC_013235  Namu_4976  cell envelope-related transcriptional attenuator  32.94 
 
 
551 aa  165  3e-39  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_1965  cell envelope-related transcriptional attenuator  27.63 
 
 
487 aa  164  4.0000000000000004e-39  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000312518 
 
 
-
 
NC_008578  Acel_0411  cell envelope-related transcriptional attenuator  30.41 
 
 
520 aa  164  4.0000000000000004e-39  Acidothermus cellulolyticus 11B  Bacteria  normal  0.118906  normal 
 
 
-
 
NC_013510  Tcur_4114  cell envelope-related transcriptional attenuator  28.32 
 
 
549 aa  164  6e-39  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_2228  cell envelope-related transcriptional attenuator  29.35 
 
 
521 aa  163  8.000000000000001e-39  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.000756142  n/a   
 
 
-
 
NC_009921  Franean1_1248  cell envelope-related transcriptional attenuator  35.01 
 
 
512 aa  162  2e-38  Frankia sp. EAN1pec  Bacteria  normal  0.375848  normal  0.0192244 
 
 
-
 
NC_013521  Sked_08580  cell envelope-related function transcriptional attenuator common domain protein  34.11 
 
 
396 aa  162  2e-38  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.783991  normal  0.393457 
 
 
-
 
NC_009077  Mjls_4896  cell envelope-related transcriptional attenuator  29.46 
 
 
701 aa  158  3e-37  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_4513  cell envelope-related transcriptional attenuator  29.37 
 
 
699 aa  157  7e-37  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4600  cell envelope-related transcriptional attenuator  29.37 
 
 
699 aa  157  7e-37  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6827  cell envelope-related transcriptional attenuator  32.57 
 
 
516 aa  156  9e-37  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0935  cell envelope-related transcriptional attenuator  30.45 
 
 
465 aa  156  1e-36  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0761113 
 
 
-
 
NC_013521  Sked_08570  cell envelope-related function transcriptional attenuator common domain protein  33.92 
 
 
365 aa  155  2e-36  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.671315  normal  0.595892 
 
 
-
 
NC_014151  Cfla_2383  cell envelope-related transcriptional attenuator  32.64 
 
 
389 aa  155  2.9999999999999998e-36  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0868762  hitchhiker  0.00772059 
 
 
-
 
NC_013172  Bfae_30000  cell envelope-related function transcriptional attenuator common domain  33.44 
 
 
395 aa  154  4e-36  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1864  cell envelope-related transcriptional attenuator  32.25 
 
 
391 aa  151  4e-35  Jonesia denitrificans DSM 20603  Bacteria  normal  0.383316  normal  0.036217 
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  32.91 
 
 
504 aa  150  5e-35  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_007777  Francci3_0711  cell envelope-related transcriptional attenuator  29.61 
 
 
526 aa  150  5e-35  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1025  cell envelope-related transcriptional attenuator  34.39 
 
 
434 aa  150  8e-35  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.11457  n/a   
 
 
-
 
NC_013159  Svir_37600  cell envelope-related function transcriptional attenuator common domain protein  33.89 
 
 
619 aa  148  3e-34  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.760055  normal  0.249296 
 
 
-
 
NC_014210  Ndas_4745  cell envelope-related transcriptional attenuator  30.96 
 
 
584 aa  147  4.0000000000000006e-34  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_1666  cell envelope-related transcriptional attenuator  28.51 
 
 
649 aa  147  5e-34  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  30.5 
 
 
505 aa  147  8.000000000000001e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_009921  Franean1_5902  cell envelope-related transcriptional attenuator  30.29 
 
 
625 aa  146  1e-33  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  31.21 
 
 
491 aa  146  1e-33  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_009565  TBFG_10837  hypothetical protein  27.6 
 
 
684 aa  145  2e-33  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.000372154 
 
 
-
 
NC_007777  Francci3_0712  cell envelope-related transcriptional attenuator  31.44 
 
 
573 aa  145  2e-33  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_5087  cell envelope-related transcriptional attenuator  28 
 
 
687 aa  145  2e-33  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  34.57 
 
 
390 aa  145  2e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1037  cell envelope-related transcriptional attenuator  28.63 
 
 
732 aa  144  6e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6814  cell envelope-related transcriptional attenuator  27.8 
 
 
1336 aa  143  8e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  26.4 
 
 
497 aa  142  1.9999999999999998e-32  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_5020  cell envelope-related transcriptional attenuator  33.22 
 
 
414 aa  142  1.9999999999999998e-32  Salinispora arenicola CNS-205  Bacteria  normal  0.417569  hitchhiker  0.000783217 
 
 
-
 
NC_009921  Franean1_1307  cell envelope-related transcriptional attenuator  29.57 
 
 
520 aa  142  3e-32  Frankia sp. EAN1pec  Bacteria  normal  0.386656  normal 
 
 
-
 
NC_013131  Caci_2100  cell envelope-related transcriptional attenuator  34.02 
 
 
393 aa  141  3e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_1558  cell envelope-related transcriptional attenuator  31.07 
 
 
545 aa  141  3.9999999999999997e-32  Frankia sp. CcI3  Bacteria  normal  normal  0.931439 
 
 
-
 
NC_013721  HMPREF0424_0589  putative transcriptional regulator  29.87 
 
 
498 aa  140  6e-32  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.581304 
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  27.15 
 
 
509 aa  137  9e-31  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_3214  cell envelope-related transcriptional attenuator  29.56 
 
 
443 aa  135  1.9999999999999998e-30  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.00000235319 
 
 
-
 
NC_009380  Strop_4510  transcription attenuator LytR  32.39 
 
 
420 aa  132  1.0000000000000001e-29  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_6384  cell envelope-related transcriptional attenuator  31.08 
 
 
352 aa  130  9.000000000000001e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  31.08 
 
 
521 aa  129  1.0000000000000001e-28  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_014158  Tpau_1061  cell envelope-related transcriptional attenuator  28.15 
 
 
567 aa  129  2.0000000000000002e-28  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_00540  cell envelope-related function transcriptional attenuator common domain protein  34.27 
 
 
357 aa  126  1e-27  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.916603  normal  0.105126 
 
 
-
 
NC_009921  Franean1_5205  cell envelope-related transcriptional attenuator  33.21 
 
 
560 aa  125  2e-27  Frankia sp. EAN1pec  Bacteria  normal  0.0714783  normal 
 
 
-
 
NC_013174  Jden_2257  cell envelope-related transcriptional attenuator  30.23 
 
 
362 aa  125  3e-27  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.518809 
 
 
-
 
NC_013093  Amir_6348  cell envelope-related transcriptional attenuator  29.21 
 
 
517 aa  124  4e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  0.352796  n/a   
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  36.99 
 
 
320 aa  122  9.999999999999999e-27  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3228  cell envelope-related transcriptional attenuator  31.38 
 
 
377 aa  122  1.9999999999999998e-26  Arthrobacter sp. FB24  Bacteria  normal  0.0471557  n/a   
 
 
-
 
NC_013235  Namu_4529  cell envelope-related transcriptional attenuator  32.13 
 
 
365 aa  121  3.9999999999999996e-26  Nakamurella multipartita DSM 44233  Bacteria  normal  0.25457  normal 
 
 
-
 
NC_013159  Svir_28900  cell envelope-related function transcriptional attenuator common domain protein  26.34 
 
 
522 aa  121  4.9999999999999996e-26  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.385343 
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  31.05 
 
 
349 aa  119  9.999999999999999e-26  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1996  cell envelope-related transcriptional attenuator  26.36 
 
 
527 aa  118  3.9999999999999997e-25  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.177975 
 
 
-
 
NC_009664  Krad_3901  cell envelope-related transcriptional attenuator  33.33 
 
 
407 aa  116  1.0000000000000001e-24  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0120062 
 
 
-
 
NC_013093  Amir_6349  cell envelope-related transcriptional attenuator  33.46 
 
 
410 aa  114  4.0000000000000004e-24  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1026  cell envelope-related transcriptional attenuator  32.66 
 
 
402 aa  114  6e-24  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.999724  n/a   
 
 
-
 
NC_013947  Snas_6386  cell envelope-related transcriptional attenuator  30.69 
 
 
382 aa  114  8.000000000000001e-24  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_13519  hypothetical protein  28.31 
 
 
512 aa  112  1.0000000000000001e-23  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.100718 
 
 
-
 
NC_009921  Franean1_5903  cell envelope-related transcriptional attenuator  29.06 
 
 
508 aa  111  4.0000000000000004e-23  Frankia sp. EAN1pec  Bacteria  normal  normal  0.667474 
 
 
-
 
NC_009972  Haur_1198  cell envelope-related transcriptional attenuator  27.93 
 
 
585 aa  111  5e-23  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  29.98 
 
 
405 aa  110  6e-23  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_014158  Tpau_1296  cell envelope-related transcriptional attenuator  29.87 
 
 
414 aa  110  7.000000000000001e-23  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_06080  cell envelope-related function transcriptional attenuator common domain protein  27.06 
 
 
538 aa  110  9.000000000000001e-23  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.832186  normal  0.188153 
 
 
-
 
NC_012803  Mlut_08920  cell envelope-related function transcriptional attenuator common domain protein  30.14 
 
 
381 aa  110  1e-22  Micrococcus luteus NCTC 2665  Bacteria  normal  0.667016  n/a   
 
 
-
 
NC_013441  Gbro_1852  cell envelope-related function transcriptional attenuator, LytR/CpsA family  26.82 
 
 
676 aa  109  1e-22  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0120  Transcriptional regulator-like protein  38.73 
 
 
326 aa  109  2e-22  Streptosporangium roseum DSM 43021  Bacteria  normal  0.224299  normal 
 
 
-
 
NC_013235  Namu_4212  cell envelope-related transcriptional attenuator  32.37 
 
 
496 aa  108  3e-22  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.134321 
 
 
-
 
NC_013131  Caci_8771  cell envelope-related transcriptional attenuator  27.54 
 
 
547 aa  107  6e-22  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.359858 
 
 
-
 
NC_013124  Afer_1145  cell envelope-related transcriptional attenuator  29.75 
 
 
543 aa  107  9e-22  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  31.92 
 
 
445 aa  106  1e-21  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_013131  Caci_7119  cell envelope-related transcriptional attenuator  33.45 
 
 
382 aa  106  1e-21  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2567  cell envelope-related transcriptional attenuator  32.63 
 
 
404 aa  105  2e-21  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_08470  cell envelope-related function transcriptional attenuator common domain protein  31.07 
 
 
394 aa  104  5e-21  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.282031 
 
 
-
 
NC_009953  Sare_4011  cell envelope-related transcriptional attenuator  28.7 
 
 
380 aa  103  9e-21  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.000201414 
 
 
-
 
NC_009380  Strop_3629  transcription attenuator LytR  28.49 
 
 
378 aa  103  1e-20  Salinispora tropica CNB-440  Bacteria  normal  0.142384  normal 
 
 
-
 
NC_009767  Rcas_0287  cell envelope-related transcriptional attenuator  27.98 
 
 
412 aa  102  2e-20  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_0136  cell envelope-related transcriptional attenuator  29.41 
 
 
466 aa  102  2e-20  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  37.75 
 
 
336 aa  102  2e-20  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
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