More than 300 homologs were found in PanDaTox collection
for query gene Caci_7415 on replicon NC_013131
Organism: Catenulispora acidiphila DSM 44928



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  100 
 
 
228 aa  446  1.0000000000000001e-124  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  70.14 
 
 
219 aa  301  5.000000000000001e-81  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  69.41 
 
 
220 aa  298  4e-80  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  69.86 
 
 
219 aa  298  5e-80  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  70.14 
 
 
234 aa  297  8e-80  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  70.64 
 
 
225 aa  297  9e-80  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  67.12 
 
 
219 aa  289  2e-77  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  68.95 
 
 
219 aa  289  2e-77  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  67.29 
 
 
211 aa  283  2.0000000000000002e-75  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2811  two component transcriptional regulator, LuxR family  67.01 
 
 
217 aa  251  9.000000000000001e-66  Actinosynnema mirum DSM 43827  Bacteria  normal  0.206772  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  57.52 
 
 
225 aa  234  8e-61  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  60.18 
 
 
229 aa  234  1.0000000000000001e-60  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  56.88 
 
 
226 aa  232  4.0000000000000004e-60  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  56.42 
 
 
218 aa  231  9e-60  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  55.86 
 
 
239 aa  230  1e-59  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  57.99 
 
 
221 aa  230  2e-59  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  55.71 
 
 
224 aa  229  2e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  56.36 
 
 
225 aa  229  2e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  53.88 
 
 
218 aa  227  1e-58  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  56.16 
 
 
226 aa  226  2e-58  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  52.97 
 
 
225 aa  226  2e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  56.42 
 
 
215 aa  225  5.0000000000000005e-58  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  55.8 
 
 
227 aa  225  6e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  54.13 
 
 
218 aa  223  2e-57  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  53.18 
 
 
225 aa  222  4.9999999999999996e-57  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  55.36 
 
 
225 aa  220  9.999999999999999e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  51.11 
 
 
242 aa  220  9.999999999999999e-57  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  50.64 
 
 
228 aa  220  9.999999999999999e-57  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  52.75 
 
 
221 aa  219  1.9999999999999999e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  52.75 
 
 
223 aa  219  3e-56  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  52.75 
 
 
220 aa  219  3e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  51.83 
 
 
221 aa  219  3e-56  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  57.27 
 
 
224 aa  218  5e-56  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  55.91 
 
 
220 aa  218  6e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013739  Cwoe_0676  two component transcriptional regulator, LuxR family  52.97 
 
 
215 aa  218  7e-56  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  55.05 
 
 
221 aa  217  1e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  52.05 
 
 
239 aa  216  2.9999999999999998e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  55.71 
 
 
220 aa  215  2.9999999999999998e-55  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  52.02 
 
 
225 aa  215  4e-55  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000789071 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  54.88 
 
 
213 aa  215  4e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  54.55 
 
 
221 aa  215  4e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.12 
 
 
230 aa  215  5.9999999999999996e-55  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  50.92 
 
 
217 aa  214  7e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_012669  Bcav_0404  two component transcriptional regulator, LuxR family  52.51 
 
 
218 aa  214  9e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0987348  normal 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  53.36 
 
 
230 aa  214  9.999999999999999e-55  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  54.26 
 
 
227 aa  213  1.9999999999999998e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014211  Ndas_4872  two component transcriptional regulator, LuxR family  51.8 
 
 
232 aa  213  1.9999999999999998e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.247388  normal 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  52.47 
 
 
214 aa  213  2.9999999999999995e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  52 
 
 
226 aa  212  2.9999999999999995e-54  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  52.23 
 
 
234 aa  212  3.9999999999999995e-54  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  53.21 
 
 
226 aa  212  3.9999999999999995e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  51.38 
 
 
225 aa  211  5.999999999999999e-54  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1403  LuxR response regulator receiver  53.67 
 
 
214 aa  211  7e-54  Thermobifida fusca YX  Bacteria  normal  0.676683  n/a   
 
 
-
 
NC_013159  Svir_39200  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  49.08 
 
 
218 aa  211  9e-54  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.254077 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  53.88 
 
 
225 aa  211  9e-54  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013510  Tcur_2233  two component transcriptional regulator, LuxR family  55.45 
 
 
232 aa  210  2e-53  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00197033  n/a   
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  54.79 
 
 
216 aa  209  2e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  52.42 
 
 
249 aa  209  3e-53  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  50.45 
 
 
261 aa  209  3e-53  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  49.33 
 
 
228 aa  208  4e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  51.82 
 
 
223 aa  209  4e-53  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.25 
 
 
226 aa  209  4e-53  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  49.54 
 
 
222 aa  208  5e-53  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  48.67 
 
 
224 aa  208  6e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  50.9 
 
 
218 aa  207  8e-53  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  51.6 
 
 
228 aa  207  9e-53  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  52.91 
 
 
230 aa  207  9e-53  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  52.05 
 
 
217 aa  207  1e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2518  two component transcriptional regulator, LuxR family  51.14 
 
 
225 aa  207  1e-52  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_21600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.07 
 
 
222 aa  207  1e-52  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.49613  normal 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  51.82 
 
 
226 aa  207  1e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  50.22 
 
 
227 aa  206  2e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  52.02 
 
 
225 aa  206  2e-52  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013947  Snas_3639  two component transcriptional regulator, LuxR family  49.77 
 
 
215 aa  206  2e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.274763  normal 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  51.13 
 
 
222 aa  206  2e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  50.91 
 
 
224 aa  206  2e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  51.63 
 
 
220 aa  205  4e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  49.32 
 
 
230 aa  205  4e-52  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  51.13 
 
 
230 aa  206  4e-52  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  51.6 
 
 
247 aa  205  5e-52  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  49.09 
 
 
221 aa  205  5e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.36 
 
 
244 aa  204  7e-52  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  48.17 
 
 
215 aa  204  7e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  51.54 
 
 
226 aa  204  8e-52  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013235  Namu_0544  two component transcriptional regulator, LuxR family  49.77 
 
 
215 aa  204  9e-52  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  53.36 
 
 
241 aa  204  1e-51  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  53.42 
 
 
217 aa  204  1e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  50.45 
 
 
224 aa  204  1e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  51.8 
 
 
216 aa  204  1e-51  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.73 
 
 
225 aa  203  1e-51  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  52.25 
 
 
234 aa  204  1e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  50.92 
 
 
221 aa  203  2e-51  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013510  Tcur_1300  two component transcriptional regulator, LuxR family  48.62 
 
 
215 aa  203  2e-51  Thermomonospora curvata DSM 43183  Bacteria  normal  0.145336  n/a   
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  49.55 
 
 
230 aa  203  2e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  49.12 
 
 
234 aa  202  3e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  52.51 
 
 
225 aa  202  3e-51  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  46.44 
 
 
250 aa  202  3e-51  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5550  two component transcriptional regulator, LuxR family  48.18 
 
 
213 aa  202  4e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.159917  normal  0.0692801 
 
 
-
 
NC_013235  Namu_0651  two component transcriptional regulator, LuxR family  50 
 
 
241 aa  201  7e-51  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  51.14 
 
 
226 aa  201  7e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
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