More than 300 homologs were found in PanDaTox collection
for query gene Caci_7160 on replicon NC_013131
Organism: Catenulispora acidiphila DSM 44928



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  100 
 
 
224 aa  432  1e-120  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  63.64 
 
 
232 aa  268  5.9999999999999995e-71  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013131  Caci_3748  two component transcriptional regulator, LuxR family  64.86 
 
 
236 aa  266  2e-70  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  65 
 
 
226 aa  261  4.999999999999999e-69  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  63.18 
 
 
223 aa  260  1e-68  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  63.64 
 
 
223 aa  256  2e-67  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000386408  hitchhiker  0.000570848 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  61.54 
 
 
225 aa  254  9e-67  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3727  two component LuxR family transcriptional regulator  62.27 
 
 
226 aa  254  1.0000000000000001e-66  Frankia sp. EAN1pec  Bacteria  normal  normal  0.554715 
 
 
-
 
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  62.78 
 
 
222 aa  251  6e-66  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.811978 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  59.09 
 
 
217 aa  250  1e-65  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  62.05 
 
 
226 aa  249  3e-65  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  58.59 
 
 
230 aa  248  4e-65  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  58.22 
 
 
224 aa  245  3e-64  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  57.21 
 
 
225 aa  242  3e-63  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  59.55 
 
 
222 aa  238  5.999999999999999e-62  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_007777  Francci3_0303  two component LuxR family transcriptional regulator  59.17 
 
 
214 aa  236  3e-61  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4511  two component transcriptional regulator, LuxR family  57.14 
 
 
226 aa  232  3e-60  Actinosynnema mirum DSM 43827  Bacteria  normal  0.11054  n/a   
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  55.86 
 
 
222 aa  232  4.0000000000000004e-60  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  57.66 
 
 
221 aa  231  8.000000000000001e-60  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  57.66 
 
 
221 aa  230  1e-59  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  57.47 
 
 
226 aa  229  2e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  57.8 
 
 
220 aa  228  5e-59  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  55.91 
 
 
219 aa  227  1e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_009921  Franean1_6511  two component LuxR family transcriptional regulator  57.53 
 
 
215 aa  226  2e-58  Frankia sp. EAN1pec  Bacteria  normal  normal  0.100644 
 
 
-
 
NC_013947  Snas_5265  two component transcriptional regulator, LuxR family  56.36 
 
 
218 aa  224  9e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  54.91 
 
 
215 aa  223  1e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  54.94 
 
 
244 aa  222  4.9999999999999996e-57  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  55.61 
 
 
261 aa  221  6e-57  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  59.46 
 
 
224 aa  221  7e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  51.8 
 
 
233 aa  219  3e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  53.81 
 
 
241 aa  218  5e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  54.5 
 
 
221 aa  218  7.999999999999999e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  55.36 
 
 
218 aa  218  8.999999999999998e-56  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.32 
 
 
236 aa  216  2e-55  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  53.64 
 
 
219 aa  216  2.9999999999999998e-55  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  52.49 
 
 
220 aa  214  5.9999999999999996e-55  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  53.15 
 
 
228 aa  215  5.9999999999999996e-55  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  52.86 
 
 
229 aa  213  1.9999999999999998e-54  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  56.36 
 
 
224 aa  213  1.9999999999999998e-54  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  53.7 
 
 
211 aa  212  2.9999999999999995e-54  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.54 
 
 
230 aa  212  2.9999999999999995e-54  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  55.3 
 
 
247 aa  212  2.9999999999999995e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  52.27 
 
 
219 aa  211  4.9999999999999996e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  53.07 
 
 
227 aa  211  5.999999999999999e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  52 
 
 
224 aa  211  5.999999999999999e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  53.36 
 
 
223 aa  211  7e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  52.49 
 
 
219 aa  210  1e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  51.35 
 
 
225 aa  211  1e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  54.59 
 
 
214 aa  210  1e-53  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  53.12 
 
 
217 aa  209  2e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  52.94 
 
 
234 aa  209  2e-53  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  57.66 
 
 
302 aa  209  3e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  52.73 
 
 
239 aa  208  4e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  51.98 
 
 
233 aa  209  4e-53  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  52.02 
 
 
225 aa  209  4e-53  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  51.56 
 
 
226 aa  208  4e-53  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  51.6 
 
 
221 aa  208  6e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  52.65 
 
 
226 aa  207  7e-53  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  51.79 
 
 
231 aa  207  7e-53  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  50.46 
 
 
220 aa  207  8e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  53.15 
 
 
221 aa  207  9e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  51.82 
 
 
228 aa  207  1e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  51.8 
 
 
221 aa  207  1e-52  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  54.42 
 
 
221 aa  206  2e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  52.23 
 
 
222 aa  206  3e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  53.15 
 
 
216 aa  205  4e-52  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013947  Snas_1509  two component transcriptional regulator, LuxR family  51.83 
 
 
221 aa  205  4e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.198395  normal  0.0597777 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  52.25 
 
 
225 aa  205  6e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  50.92 
 
 
224 aa  204  9e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  50.45 
 
 
228 aa  204  1e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  53.81 
 
 
220 aa  203  2e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  51.12 
 
 
227 aa  203  2e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  50.22 
 
 
234 aa  202  3e-51  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_010816  BLD_0671  putative response regulator  48.35 
 
 
248 aa  201  5e-51  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  50.43 
 
 
228 aa  201  6e-51  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  52.7 
 
 
215 aa  201  9e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  50.45 
 
 
225 aa  201  9.999999999999999e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  51.33 
 
 
239 aa  199  1.9999999999999998e-50  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  51.36 
 
 
219 aa  199  1.9999999999999998e-50  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  52.07 
 
 
217 aa  199  3e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  50.89 
 
 
225 aa  199  3e-50  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  49.77 
 
 
221 aa  199  3e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  49.36 
 
 
234 aa  199  3e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  43.37 
 
 
261 aa  198  6e-50  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  53.36 
 
 
220 aa  197  7e-50  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  48.48 
 
 
231 aa  197  9e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.55 
 
 
244 aa  197  1.0000000000000001e-49  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  50.64 
 
 
239 aa  196  2.0000000000000003e-49  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  53.42 
 
 
223 aa  197  2.0000000000000003e-49  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  48.65 
 
 
218 aa  196  2.0000000000000003e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013131  Caci_6705  two component transcriptional regulator, LuxR family  47.43 
 
 
258 aa  195  4.0000000000000005e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.318103  normal  0.0731204 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  51.8 
 
 
225 aa  195  5.000000000000001e-49  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.53 
 
 
229 aa  195  5.000000000000001e-49  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  49.78 
 
 
226 aa  194  9e-49  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  50.22 
 
 
225 aa  193  1e-48  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  50.45 
 
 
218 aa  194  1e-48  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  50.44 
 
 
227 aa  193  2e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  52.02 
 
 
220 aa  193  2e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  49.11 
 
 
218 aa  193  2e-48  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2233  two component transcriptional regulator, LuxR family  50.46 
 
 
232 aa  193  2e-48  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00197033  n/a   
 
 
-
 
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