More than 300 homologs were found in PanDaTox collection
for query gene Caci_2656 on replicon NC_013131
Organism: Catenulispora acidiphila DSM 44928



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  100 
 
 
226 aa  442  1e-123  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  63.59 
 
 
228 aa  268  4e-71  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  56.88 
 
 
225 aa  231  8.000000000000001e-60  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  54.95 
 
 
227 aa  230  1e-59  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  57.33 
 
 
222 aa  225  5.0000000000000005e-58  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  55.81 
 
 
220 aa  223  2e-57  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  54.17 
 
 
218 aa  221  4.9999999999999996e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  56.28 
 
 
218 aa  221  6e-57  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  52.97 
 
 
225 aa  220  9.999999999999999e-57  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  54.42 
 
 
225 aa  219  3e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  51.27 
 
 
234 aa  218  6e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  55.11 
 
 
225 aa  217  8.999999999999998e-56  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  55.2 
 
 
239 aa  217  1e-55  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  52.78 
 
 
224 aa  215  5e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  53.68 
 
 
229 aa  214  8e-55  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  53.98 
 
 
226 aa  214  9.999999999999999e-55  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  53.92 
 
 
220 aa  213  1.9999999999999998e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  54.5 
 
 
230 aa  213  2.9999999999999995e-54  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  52.31 
 
 
224 aa  212  3.9999999999999995e-54  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  51.35 
 
 
221 aa  212  3.9999999999999995e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  54.42 
 
 
217 aa  212  3.9999999999999995e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  53.6 
 
 
222 aa  211  7e-54  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  55.2 
 
 
223 aa  211  9e-54  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_008697  Noca_4896  response regulator receiver  53.49 
 
 
215 aa  211  1e-53  Nocardioides sp. JS614  Bacteria  normal  0.446448  normal  0.220667 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  53.64 
 
 
225 aa  210  1e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  52.07 
 
 
216 aa  209  2e-53  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  53.36 
 
 
225 aa  209  2e-53  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  50.93 
 
 
261 aa  209  3e-53  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  55.91 
 
 
221 aa  209  3e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.64 
 
 
226 aa  208  5e-53  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  54.59 
 
 
221 aa  208  6e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  53.33 
 
 
226 aa  207  9e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  51.82 
 
 
228 aa  207  1e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  51.36 
 
 
220 aa  207  1e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  50.23 
 
 
221 aa  207  2e-52  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  55.05 
 
 
218 aa  206  2e-52  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  52.29 
 
 
225 aa  206  2e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  52.09 
 
 
239 aa  206  3e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  53.42 
 
 
226 aa  205  4e-52  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  55.09 
 
 
217 aa  205  5e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  53.64 
 
 
223 aa  205  5e-52  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  53.24 
 
 
219 aa  205  5e-52  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.9 
 
 
225 aa  205  5e-52  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  54.05 
 
 
230 aa  204  6e-52  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  53.22 
 
 
231 aa  204  7e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  53.67 
 
 
225 aa  204  8e-52  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  54.13 
 
 
221 aa  204  8e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  52.27 
 
 
220 aa  204  9e-52  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  51.12 
 
 
227 aa  204  9e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  52.49 
 
 
220 aa  204  9e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  51.87 
 
 
218 aa  204  9e-52  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  50.45 
 
 
228 aa  204  9e-52  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  53.95 
 
 
241 aa  204  1e-51  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  51.35 
 
 
226 aa  204  1e-51  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  51.61 
 
 
224 aa  202  3e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  50.91 
 
 
230 aa  202  3e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  54.09 
 
 
224 aa  202  3e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  52.97 
 
 
225 aa  202  4e-51  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  52.34 
 
 
219 aa  201  9e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  52 
 
 
227 aa  201  9e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50 
 
 
229 aa  201  9.999999999999999e-51  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013530  Xcel_0239  two component transcriptional regulator, LuxR family  49.32 
 
 
230 aa  200  9.999999999999999e-51  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  53.18 
 
 
234 aa  201  9.999999999999999e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  53 
 
 
217 aa  200  9.999999999999999e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_007333  Tfu_1403  LuxR response regulator receiver  51.61 
 
 
214 aa  200  1.9999999999999998e-50  Thermobifida fusca YX  Bacteria  normal  0.676683  n/a   
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  52.34 
 
 
220 aa  200  1.9999999999999998e-50  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  53.15 
 
 
221 aa  200  1.9999999999999998e-50  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  50.91 
 
 
222 aa  199  3e-50  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  53 
 
 
219 aa  199  3.9999999999999996e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  52.53 
 
 
222 aa  198  3.9999999999999996e-50  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  50.64 
 
 
244 aa  198  6e-50  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  52.38 
 
 
211 aa  198  7e-50  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1652  two component LuxR family transcriptional regulator  53.7 
 
 
217 aa  197  7.999999999999999e-50  Frankia sp. EAN1pec  Bacteria  normal  0.495895  normal  0.106337 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  53.77 
 
 
214 aa  197  7.999999999999999e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  50.45 
 
 
230 aa  197  7.999999999999999e-50  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  48.02 
 
 
233 aa  197  9e-50  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013739  Cwoe_2472  two component transcriptional regulator, LuxR family  51.14 
 
 
221 aa  197  9e-50  Conexibacter woesei DSM 14684  Bacteria  normal  0.0113125  hitchhiker  0.00367669 
 
 
-
 
NC_013595  Sros_5499  response regulator receiver protein  53.24 
 
 
213 aa  197  1.0000000000000001e-49  Streptosporangium roseum DSM 43021  Bacteria  decreased coverage  0.00659712  normal  0.108677 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  49.78 
 
 
234 aa  197  1.0000000000000001e-49  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  53.05 
 
 
215 aa  197  1.0000000000000001e-49  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  51.4 
 
 
230 aa  197  1.0000000000000001e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  50 
 
 
215 aa  197  1.0000000000000001e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_012669  Bcav_3028  two component transcriptional regulator, LuxR family  53.24 
 
 
225 aa  197  1.0000000000000001e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.211566  decreased coverage  0.0000266978 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.23 
 
 
236 aa  196  2.0000000000000003e-49  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  49.08 
 
 
224 aa  196  2.0000000000000003e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013131  Caci_6705  two component transcriptional regulator, LuxR family  47.45 
 
 
258 aa  196  2.0000000000000003e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.318103  normal  0.0731204 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  54.05 
 
 
225 aa  197  2.0000000000000003e-49  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  50.93 
 
 
228 aa  196  2.0000000000000003e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  44.08 
 
 
250 aa  196  3e-49  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  50 
 
 
231 aa  195  4.0000000000000005e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013595  Sros_6211  response regulator receiver protein  51.42 
 
 
239 aa  195  5.000000000000001e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.377169 
 
 
-
 
NC_013131  Caci_6529  two component transcriptional regulator, LuxR family  52.04 
 
 
224 aa  195  6e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.270807  normal  0.114568 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  52.29 
 
 
219 aa  195  6e-49  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  52.75 
 
 
215 aa  194  7e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  53.42 
 
 
220 aa  194  7e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  52.49 
 
 
226 aa  194  8.000000000000001e-49  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  45.16 
 
 
219 aa  194  1e-48  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  49.77 
 
 
217 aa  194  1e-48  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  54.63 
 
 
302 aa  194  1e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  47.66 
 
 
222 aa  193  2e-48  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>