More than 300 homologs were found in PanDaTox collection
for query gene Caci_1951 on replicon NC_013131
Organism: Catenulispora acidiphila DSM 44928



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  100 
 
 
226 aa  439  9.999999999999999e-123  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  64.65 
 
 
223 aa  275  4e-73  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  63.16 
 
 
232 aa  273  1.0000000000000001e-72  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  65.91 
 
 
222 aa  269  2.9999999999999997e-71  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.811978 
 
 
-
 
NC_009921  Franean1_3727  two component LuxR family transcriptional regulator  65.3 
 
 
226 aa  266  1e-70  Frankia sp. EAN1pec  Bacteria  normal  normal  0.554715 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  63.23 
 
 
221 aa  265  5.999999999999999e-70  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  62.21 
 
 
225 aa  261  4e-69  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  64.38 
 
 
226 aa  261  4e-69  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  63.18 
 
 
223 aa  260  1e-68  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000386408  hitchhiker  0.000570848 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  60.99 
 
 
224 aa  259  2e-68  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013093  Amir_4511  two component transcriptional regulator, LuxR family  62.73 
 
 
226 aa  257  1e-67  Actinosynnema mirum DSM 43827  Bacteria  normal  0.11054  n/a   
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  64.22 
 
 
222 aa  256  2e-67  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  60.27 
 
 
225 aa  253  1.0000000000000001e-66  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  60.27 
 
 
220 aa  250  1e-65  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  62.05 
 
 
224 aa  249  3e-65  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_3748  two component transcriptional regulator, LuxR family  60.81 
 
 
236 aa  248  6e-65  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  61.93 
 
 
221 aa  248  6e-65  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  60.73 
 
 
215 aa  246  2e-64  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  63.18 
 
 
224 aa  245  3e-64  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  58.9 
 
 
222 aa  245  4e-64  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  59.83 
 
 
244 aa  243  9.999999999999999e-64  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  59.11 
 
 
230 aa  242  3e-63  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  56.36 
 
 
233 aa  241  7e-63  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  59.73 
 
 
219 aa  241  9e-63  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  57.27 
 
 
228 aa  240  1e-62  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  57.6 
 
 
217 aa  235  4e-61  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  57.4 
 
 
226 aa  233  2.0000000000000002e-60  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  58.9 
 
 
221 aa  231  5e-60  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  56.05 
 
 
227 aa  231  5e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  57.08 
 
 
221 aa  231  5e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  56.56 
 
 
222 aa  230  1e-59  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  56.95 
 
 
247 aa  230  1e-59  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013947  Snas_5265  two component transcriptional regulator, LuxR family  57.34 
 
 
218 aa  229  2e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  56.94 
 
 
226 aa  229  2e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  58.6 
 
 
214 aa  228  7e-59  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  56.11 
 
 
225 aa  222  3e-57  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  52.97 
 
 
218 aa  221  8e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  55.05 
 
 
220 aa  220  9.999999999999999e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  55.66 
 
 
234 aa  220  9.999999999999999e-57  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  53.33 
 
 
225 aa  219  1.9999999999999999e-56  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  53.51 
 
 
227 aa  219  1.9999999999999999e-56  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  54.95 
 
 
219 aa  219  3e-56  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  54.05 
 
 
219 aa  219  3e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  56.56 
 
 
217 aa  218  5e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  53.98 
 
 
228 aa  218  6e-56  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  55.16 
 
 
225 aa  217  1e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  54.09 
 
 
221 aa  217  1e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  55.91 
 
 
220 aa  217  1e-55  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  56.42 
 
 
224 aa  217  1e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  53.36 
 
 
231 aa  217  1e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  53.64 
 
 
221 aa  216  2e-55  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  53.07 
 
 
226 aa  216  2e-55  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  51.98 
 
 
241 aa  216  2.9999999999999998e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  54.09 
 
 
219 aa  215  5e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  53.18 
 
 
219 aa  214  7e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  53.39 
 
 
220 aa  214  9e-55  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  52.73 
 
 
221 aa  213  1.9999999999999998e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  53.33 
 
 
239 aa  213  1.9999999999999998e-54  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  54.71 
 
 
228 aa  213  1.9999999999999998e-54  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  55.16 
 
 
222 aa  213  1.9999999999999998e-54  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  53.36 
 
 
224 aa  213  1.9999999999999998e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_007777  Francci3_0303  two component LuxR family transcriptional regulator  53.7 
 
 
214 aa  212  2.9999999999999995e-54  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  53.74 
 
 
229 aa  212  3.9999999999999995e-54  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  54.2 
 
 
231 aa  212  3.9999999999999995e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  53.88 
 
 
218 aa  211  4.9999999999999996e-54  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013947  Snas_1509  two component transcriptional regulator, LuxR family  52.05 
 
 
221 aa  211  5.999999999999999e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.198395  normal  0.0597777 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  53.85 
 
 
225 aa  211  5.999999999999999e-54  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_6511  two component LuxR family transcriptional regulator  53.49 
 
 
215 aa  210  1e-53  Frankia sp. EAN1pec  Bacteria  normal  normal  0.100644 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.32 
 
 
236 aa  210  2e-53  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  49.78 
 
 
261 aa  209  2e-53  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  52.73 
 
 
224 aa  209  2e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.67 
 
 
229 aa  209  3e-53  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  55 
 
 
216 aa  209  3e-53  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  55.2 
 
 
220 aa  209  3e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  55.66 
 
 
215 aa  209  3e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  53.98 
 
 
225 aa  209  3e-53  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  51.83 
 
 
217 aa  208  5e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  53.33 
 
 
226 aa  207  9e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  57.99 
 
 
302 aa  207  9e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  53.77 
 
 
211 aa  207  1e-52  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  51.98 
 
 
227 aa  207  1e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  54.26 
 
 
230 aa  206  2e-52  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  53.81 
 
 
239 aa  205  4e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.81 
 
 
225 aa  205  4e-52  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013131  Caci_1616  two component transcriptional regulator, LuxR family  48.67 
 
 
226 aa  205  5e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0231149  normal  0.0629914 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  54.75 
 
 
221 aa  205  6e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  51.12 
 
 
225 aa  205  6e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  53.51 
 
 
230 aa  204  7e-52  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  53.64 
 
 
225 aa  204  8e-52  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  52.68 
 
 
224 aa  203  1e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  52.7 
 
 
225 aa  203  1e-51  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013521  Sked_37860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.46 
 
 
221 aa  203  2e-51  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  53.15 
 
 
223 aa  203  2e-51  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  52.29 
 
 
218 aa  202  3e-51  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  54.05 
 
 
220 aa  202  3e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  50.9 
 
 
234 aa  202  4e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  51.14 
 
 
228 aa  201  6e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  47.11 
 
 
248 aa  201  6e-51  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  54.55 
 
 
220 aa  201  7e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  41.27 
 
 
261 aa  201  8e-51  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
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