More than 300 homologs were found in PanDaTox collection
for query gene Caci_0809 on replicon NC_013131
Organism: Catenulispora acidiphila DSM 44928



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_0782  Carbamoyl-phosphate synthase L chain ATP- binding protein  71.72 
 
 
582 aa  802    Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.742429  normal 
 
 
-
 
NC_009664  Krad_3912  Carbamoyl-phosphate synthase L chain ATP-binding  66.45 
 
 
634 aa  747    Kineococcus radiotolerans SRS30216  Bacteria  normal  0.473809  normal  0.0845343 
 
 
-
 
NC_013235  Namu_4233  Carbamoyl-phosphate synthase L chain ATP- binding  70.03 
 
 
594 aa  816    Nakamurella multipartita DSM 44233  Bacteria  normal  0.213527  normal  0.607428 
 
 
-
 
NC_009338  Mflv_4784  carbamoyl-phosphate synthase L chain, ATP-binding  67.57 
 
 
599 aa  782    Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.324654  normal 
 
 
-
 
NC_013131  Caci_6500  Carbamoyl-phosphate synthase L chain ATP- binding  84.8 
 
 
589 aa  1002    Catenulispora acidiphila DSM 44928  Bacteria  normal  0.450636  normal  0.501395 
 
 
-
 
NC_004578  PSPTO_5381  biotin carboxylase/biotin carboxyl carrier protein  59.49 
 
 
579 aa  660    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0500  carbamoyl-phosphate synthase subunit L  60.44 
 
 
577 aa  659    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.193791  normal 
 
 
-
 
NC_009380  Strop_0849  carbamoyl-phosphate synthase L chain, ATP-binding  70.14 
 
 
583 aa  812    Salinispora tropica CNB-440  Bacteria  normal  normal  0.650439 
 
 
-
 
NC_009077  Mjls_1325  carbamoyl-phosphate synthase L chain, ATP-binding  68.98 
 
 
602 aa  803    Mycobacterium sp. JLS  Bacteria  normal  0.727992  normal 
 
 
-
 
NC_013521  Sked_25500  acetyl/propionyl-CoA carboxylase, alpha subunit  69.26 
 
 
593 aa  780    Sanguibacter keddieii DSM 10542  Bacteria  normal  0.196991  normal  0.172822 
 
 
-
 
NC_007333  Tfu_2557  putative acyl-CoA carboxylase, alpha subunit  75.25 
 
 
587 aa  892    Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3292  Carbamoyl-phosphate synthase L chain ATP-binding  59.01 
 
 
577 aa  638    Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_1832  Carbamoyl-phosphate synthase L chain ATP- binding protein  66.33 
 
 
601 aa  754    Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_05670  acetyl/propionyl-CoA carboxylase, alpha subunit  69.43 
 
 
618 aa  802    Micrococcus luteus NCTC 2665  Bacteria  normal  0.512556  n/a   
 
 
-
 
NC_013131  Caci_3538  Carbamoyl-phosphate synthase L chain ATP- binding  83.7 
 
 
591 aa  994    Catenulispora acidiphila DSM 44928  Bacteria  normal  0.206514  normal 
 
 
-
 
NC_013169  Ksed_08190  acetyl/propionyl-CoA carboxylase, alpha subunit  73.17 
 
 
593 aa  852    Kytococcus sedentarius DSM 20547  Bacteria  normal  0.253328  normal  0.580973 
 
 
-
 
NC_014210  Ndas_3943  Carbamoyl-phosphate synthase L chain ATP-binding protein  73.01 
 
 
589 aa  859    Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.705932  normal 
 
 
-
 
NC_013093  Amir_6396  Carbamoyl-phosphate synthase L chain ATP- binding  70.05 
 
 
588 aa  788    Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_5845  biotin carboxylase  60.24 
 
 
578 aa  656    Agrobacterium vitis S4  Bacteria  normal  0.249832  n/a   
 
 
-
 
NC_007777  Francci3_0698  carbamoyl-phosphate synthase L chain, ATP-binding  73.31 
 
 
585 aa  840    Frankia sp. CcI3  Bacteria  normal  normal  0.933214 
 
 
-
 
NC_012669  Bcav_1137  Carbamoyl-phosphate synthase L chain ATP-binding  67.86 
 
 
605 aa  749    Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_1034  Carbamoyl-phosphate synthase L chain ATP- binding protein  69.18 
 
 
599 aa  804    Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.707661 
 
 
-
 
NC_013757  Gobs_4367  Carbamoyl-phosphate synthase L chain ATP- binding protein  71.6 
 
 
584 aa  812    Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.830439  n/a   
 
 
-
 
NC_013131  Caci_0809  Carbamoyl-phosphate synthase L chain ATP- binding  100 
 
 
587 aa  1176    Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1012  Carbamoyl-phosphate synthase L chain ATP- binding protein  70.05 
 
 
600 aa  799    Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.412146  n/a   
 
 
-
 
NC_013159  Svir_05850  acetyl/propionyl-CoA carboxylase, alpha subunit  70.29 
 
 
591 aa  822    Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.79631 
 
 
-
 
NC_013595  Sros_3798  carbamoyl-phosphate synthase L chain ATP- binding protein  69.34 
 
 
583 aa  813    Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.608993 
 
 
-
 
NC_008146  Mmcs_1289  carbamoyl-phosphate synthase L chain, ATP-binding protein  68.98 
 
 
602 aa  803    Mycobacterium sp. MCS  Bacteria  normal  0.252747  n/a   
 
 
-
 
NC_013595  Sros_1299  carbamoyl-phosphate synthase L chain ATP- binding protein  69.34 
 
 
579 aa  814    Streptosporangium roseum DSM 43021  Bacteria  normal  0.969977  normal 
 
 
-
 
NC_011886  Achl_0174  Carbamoyl-phosphate synthase L chain ATP-binding  63.42 
 
 
591 aa  673    Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013172  Bfae_21160  acetyl/propionyl-CoA carboxylase, alpha subunit  69.61 
 
 
592 aa  822    Brachybacterium faecium DSM 4810  Bacteria  normal  0.127791  n/a   
 
 
-
 
NC_013510  Tcur_4175  Carbamoyl-phosphate synthase L chain ATP- binding protein  76.66 
 
 
584 aa  880    Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_13314  bifunctional protein acetyl-/propionyl-coenzyme A carboxylase alpha subunit accA3: biotin carboxylase + biotin carboxyl carrier protein  66.89 
 
 
600 aa  735    Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_0096  carbamoyl-phosphate synthase L chain, ATP-binding  64.12 
 
 
587 aa  691    Arthrobacter sp. FB24  Bacteria  normal  0.800977  n/a   
 
 
-
 
NC_008541  Arth_1271  carbamoyl-phosphate synthase L chain, ATP-binding  69.61 
 
 
617 aa  825    Arthrobacter sp. FB24  Bacteria  normal  0.333406  n/a   
 
 
-
 
NC_013174  Jden_0845  Carbamoyl-phosphate synthase L chain ATP- binding  68.29 
 
 
595 aa  766    Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_1031  Carbamoyl-phosphate synthase L chain ATP- binding protein  64.97 
 
 
602 aa  733    Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0691  carbamoyl-phosphate synthase L chain ATP- binding protein  74.02 
 
 
581 aa  870    Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5916  carbamoyl-phosphate synthase L chain ATP-binding  73.51 
 
 
587 aa  847    Frankia sp. EAN1pec  Bacteria  normal  normal  0.574289 
 
 
-
 
NC_008699  Noca_3510  carbamoyl-phosphate synthase L chain, ATP-binding  72.23 
 
 
590 aa  849    Nocardioides sp. JS614  Bacteria  normal  0.221437  n/a   
 
 
-
 
NC_008705  Mkms_1306  carbamoyl-phosphate synthase L chain, ATP-binding  68.98 
 
 
602 aa  803    Mycobacterium sp. KMS  Bacteria  normal  0.0707012  normal  0.142834 
 
 
-
 
NC_008726  Mvan_1664  carbamoyl-phosphate synthase L chain, ATP-binding  66.89 
 
 
600 aa  771    Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0792  carbamoyl-phosphate synthase L chain ATP-binding  69.68 
 
 
583 aa  819    Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00727726 
 
 
-
 
NC_007333  Tfu_1228  putative acyl-CoA carboxylase complex A subunit  57.29 
 
 
589 aa  625  1e-178  Thermobifida fusca YX  Bacteria  normal  0.358541  n/a   
 
 
-
 
NC_008686  Pden_0323  carbamoyl-phosphate synthase L chain, ATP-binding  56.97 
 
 
588 aa  626  1e-178  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0868  carbamoyl-phosphate synthase L chain, ATP-binding  58.52 
 
 
577 aa  624  1e-177  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2451  carbamoyl-phosphate synthase subunit L  56.31 
 
 
576 aa  621  1e-176  Ralstonia eutropha JMP134  Bacteria  normal  0.0140517  n/a   
 
 
-
 
NC_010002  Daci_5726  carbamoyl-phosphate synthase L chain ATP-binding  57.17 
 
 
575 aa  616  1e-175  Delftia acidovorans SPH-1  Bacteria  normal  0.267998  normal  0.835782 
 
 
-
 
NC_008752  Aave_3510  carbamoyl-phosphate synthase L chain, ATP-binding  58.61 
 
 
583 aa  605  9.999999999999999e-173  Acidovorax citrulli AAC00-1  Bacteria  normal  0.866354  normal  0.682914 
 
 
-
 
NC_012803  Mlut_19240  acetyl-CoA carboxylase, biotin carboxylase  57.34 
 
 
591 aa  597  1e-169  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0532  Carbamoyl-phosphate synthase L chain ATP-binding  55.27 
 
 
575 aa  552  1e-156  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.290431  decreased coverage  0.00468194 
 
 
-
 
NC_013721  HMPREF0424_1199  carbamoyl-phosphate synthase L chain, ATP binding domain protein  47.11 
 
 
637 aa  533  1e-150  Gardnerella vaginalis 409-05  Bacteria  n/a    hitchhiker  0.00000920632 
 
 
-
 
NC_013124  Afer_0730  Carbamoyl-phosphate synthase L chain ATP- binding  50.51 
 
 
588 aa  503  1e-141  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.858294  n/a   
 
 
-
 
NC_013922  Nmag_3094  Carbamoyl-phosphate synthase L chain ATP-binding protein  47.39 
 
 
611 aa  499  1e-140  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013922  Nmag_2123  Carbamoyl-phosphate synthase L chain ATP-binding protein  46.87 
 
 
592 aa  496  1e-139  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_010816  BLD_1631  acetyl/propionyl-CoA carboxylase subunit alpha  44.59 
 
 
654 aa  495  1e-139  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4207  acetyl-CoA carboxylase, biotin carboxylase  44.9 
 
 
588 aa  489  1e-137  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_1729  Carbamoyl-phosphate synthase L chain ATP- binding protein  45.83 
 
 
610 aa  487  1e-136  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_008148  Rxyl_2464  carbamoyl-phosphate synthase L chain, ATP-binding protein  47.7 
 
 
580 aa  469  1.0000000000000001e-131  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_2575  Carbamoyl-phosphate synthase L chain ATP- binding  45.16 
 
 
613 aa  461  9.999999999999999e-129  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_011831  Cagg_2537  acetyl-CoA carboxylase, biotin carboxylase  47.02 
 
 
590 aa  456  1e-127  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.232961  normal 
 
 
-
 
NC_013525  Tter_1619  Carbamoyl-phosphate synthase L chain ATP- binding protein  42.69 
 
 
581 aa  447  1.0000000000000001e-124  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007513  Syncc9902_0421  acetyl-CoA carboxylase biotin carboxylase subunit  48.88 
 
 
448 aa  442  1e-123  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_2259  acetyl-CoA carboxylase biotin carboxylase subunit  49.33 
 
 
448 aa  442  1e-123  Synechococcus sp. CC9605  Bacteria  normal  0.571536  normal  0.652272 
 
 
-
 
NC_009091  P9301_00711  acetyl-CoA carboxylase biotin carboxylase subunit  47.03 
 
 
449 aa  439  9.999999999999999e-123  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_2052  acetyl-CoA carboxylase biotin carboxylase subunit  51.92 
 
 
447 aa  437  1e-121  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_007335  PMN2A_1423  acetyl-CoA carboxylase biotin carboxylase subunit  48.21 
 
 
447 aa  436  1e-121  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_008817  P9515_00691  acetyl-CoA carboxylase biotin carboxylase subunit  47.47 
 
 
449 aa  439  1e-121  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.36167  n/a   
 
 
-
 
NC_007577  PMT9312_0062  acetyl-CoA carboxylase biotin carboxylase subunit  47.25 
 
 
448 aa  436  1e-121  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_009976  P9211_00681  acetyl-CoA carboxylase biotin carboxylase subunit  48.21 
 
 
448 aa  438  1e-121  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_1065  acetyl-CoA carboxylase, biotin carboxylase  47.64 
 
 
448 aa  432  1e-120  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000015139  n/a   
 
 
-
 
NC_008816  A9601_00721  acetyl-CoA carboxylase biotin carboxylase subunit  46.81 
 
 
449 aa  435  1e-120  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.249054  n/a   
 
 
-
 
NC_013739  Cwoe_5538  Carbamoyl-phosphate synthase L chain ATP- binding protein  45.19 
 
 
596 aa  434  1e-120  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0551401 
 
 
-
 
NC_009767  Rcas_4290  acetyl-CoA carboxylase, biotin carboxylase  43.92 
 
 
591 aa  434  1e-120  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.0509531 
 
 
-
 
NC_008819  NATL1_01241  acetyl-CoA carboxylase biotin carboxylase subunit  47.53 
 
 
447 aa  429  1e-119  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.114391  normal 
 
 
-
 
NC_009523  RoseRS_3603  acetyl-CoA carboxylase, biotin carboxylase  44.07 
 
 
590 aa  430  1e-119  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.105957 
 
 
-
 
NC_012029  Hlac_2540  Carbamoyl-phosphate synthase L chain ATP-binding  44.16 
 
 
626 aa  431  1e-119  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal  0.391908 
 
 
-
 
NC_010424  Daud_1016  acetyl-CoA carboxylase, biotin carboxylase  47.87 
 
 
446 aa  428  1e-118  Candidatus Desulforudis audaxviator MP104C  Bacteria  unclonable  0.0000000161184  n/a   
 
 
-
 
NC_009484  Acry_2379  acetyl-CoA carboxylase biotin carboxylase subunit  52.7 
 
 
448 aa  426  1e-118  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_008820  P9303_03221  acetyl-CoA carboxylase biotin carboxylase subunit  46.64 
 
 
448 aa  422  1e-117  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_009634  Mevan_1351  pyruvate carboxylase subunit A  47.73 
 
 
506 aa  424  1e-117  Methanococcus vannielii SB  Archaea  normal  0.926439  n/a   
 
 
-
 
NC_007575  Suden_0622  biotin carboxylase-like  45.81 
 
 
485 aa  422  1e-117  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_1379  acetyl-CoA carboxylase biotin carboxylase subunit  47.87 
 
 
453 aa  424  1e-117  Synechococcus elongatus PCC 7942  Bacteria  normal  0.34087  normal 
 
 
-
 
NC_013161  Cyan8802_1455  acetyl-CoA carboxylase biotin carboxylase subunit  47.9 
 
 
449 aa  423  1e-117  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_013924  Nmag_4033  Carbamoyl-phosphate synthase L chain ATP-binding protein  49.33 
 
 
447 aa  421  1e-116  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_011726  PCC8801_1426  acetyl-CoA carboxylase biotin carboxylase subunit  47.66 
 
 
449 aa  422  1e-116  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009637  MmarC7_1342  pyruvate carboxylase subunit A  45.22 
 
 
494 aa  420  1e-116  Methanococcus maripaludis C7  Archaea  normal  0.492096  normal  0.0929613 
 
 
-
 
NC_007955  Mbur_2426  pyruvate carboxylase subunit A  49.42 
 
 
498 aa  421  1e-116  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_009511  Swit_4698  acetyl-CoA carboxylase, biotin carboxylase  48.99 
 
 
450 aa  421  1e-116  Sphingomonas wittichii RW1  Bacteria  normal  0.641481  normal 
 
 
-
 
NC_011884  Cyan7425_1480  acetyl-CoA carboxylase biotin carboxylase subunit  47.4 
 
 
448 aa  421  1e-116  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.841777 
 
 
-
 
NC_013216  Dtox_2602  acetyl-CoA carboxylase, biotin carboxylase  46.07 
 
 
447 aa  420  1e-116  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.000536628  normal 
 
 
-
 
NC_007355  Mbar_A1587  pyruvate carboxylase subunit A  48.14 
 
 
493 aa  417  9.999999999999999e-116  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.482835  normal 
 
 
-
 
NC_011729  PCC7424_3033  acetyl-CoA carboxylase biotin carboxylase subunit  47.09 
 
 
448 aa  416  9.999999999999999e-116  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_010571  Oter_1675  acetyl-CoA carboxylase, biotin carboxylase  46.04 
 
 
454 aa  416  9.999999999999999e-116  Opitutus terrae PB90-1  Bacteria  normal  normal  0.130972 
 
 
-
 
NC_011832  Mpal_1009  pyruvate carboxylase subunit A  45.89 
 
 
491 aa  413  1e-114  Methanosphaerula palustris E1-9c  Archaea  normal  0.716898  normal  0.701682 
 
 
-
 
NC_013061  Phep_3289  acetyl-CoA carboxylase, biotin carboxylase  48.64 
 
 
496 aa  415  1e-114  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.191323 
 
 
-
 
NC_009635  Maeo_1006  pyruvate carboxylase subunit A  47.64 
 
 
509 aa  414  1e-114  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_009135  MmarC5_1333  pyruvate carboxylase subunit A  43.88 
 
 
497 aa  412  1e-114  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_008312  Tery_3707  acetyl-CoA carboxylase biotin carboxylase subunit  46.4 
 
 
451 aa  413  1e-114  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.730456 
 
 
-
 
NC_008346  Swol_0559  biotin carboxylase  47.18 
 
 
449 aa  412  1e-114  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.000152062  n/a   
 
 
-
 
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