More than 300 homologs were found in PanDaTox collection
for query gene Caci_0683 on replicon NC_013131
Organism: Catenulispora acidiphila DSM 44928



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  100 
 
 		 234 aa  459  9.999999999999999e-129  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal  1 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  71.49 
 
 		 225 aa  307  1.0000000000000001e-82  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.114252 
 
 
-
 
NC_009921  Franean1_1652  two component LuxR family transcriptional regulator  71.37 
 
 		 217 aa  293  2e-78  Frankia sp. EAN1pec  Bacteria  normal  0.495895  normal  0.106337 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  65.24 
 
 		 227 aa  289  3e-77  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  57.39 
 
 		 221 aa  245  4.9999999999999997e-64  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  57.39 
 
 		 226 aa  242  3e-63  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  54.55 
 
 		 225 aa  236  2e-61  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  57.83 
 
 		 225 aa  236  3e-61  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  57.39 
 
 		 225 aa  235  3e-61  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  56.52 
 
 		 224 aa  235  4e-61  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal  1 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  55.46 
 
 		 221 aa  235  4e-61  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal  1 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  57.14 
 
 		 230 aa  235  4e-61  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.0025253 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  56.96 
 
 		 218 aa  235  5.0000000000000005e-61  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  55.26 
 
 		 224 aa  234  7e-61  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  56.22 
 
 		 226 aa  234  9e-61  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal  1 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  57.83 
 
 		 220 aa  234  1.0000000000000001e-60  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  55.22 
 
 		 227 aa  233  2.0000000000000002e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  54.04 
 
 		 222 aa  231  5e-60  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  54.08 
 
 		 228 aa  230  1e-59  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  55.93 
 
 		 234 aa  230  2e-59  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  56.03 
 
 		 230 aa  229  3e-59  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  56.14 
 
 		 241 aa  229  4e-59  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  54.7 
 
 		 225 aa  229  4e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.137578 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  53.65 
 
 		 220 aa  228  5e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.495874 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  51.78 
 
 		 250 aa  228  6e-59  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  56.03 
 
 		 225 aa  228  6e-59  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  54.74 
 
 		 239 aa  228  7e-59  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  54.47 
 
 		 229 aa  228  8e-59  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  55.22 
 
 		 220 aa  227  1e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal  1 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  53.51 
 
 		 239 aa  227  1e-58  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  53.97 
 
 		 249 aa  226  2e-58  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal  1 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  56.19 
 
 		 217 aa  226  2e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  53.91 
 
 		 221 aa  225  4e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal  1 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  54.74 
 
 		 247 aa  225  4e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal  1 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  53.48 
 
 		 216 aa  225  5.0000000000000005e-58  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  55.17 
 
 		 227 aa  224  6e-58  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  52.17 
 
 		 215 aa  224  1e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  53.1 
 
 		 230 aa  223  2e-57  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.455968 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  54.35 
 
 		 230 aa  223  2e-57  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  54.59 
 
 		 220 aa  223  3e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  53.51 
 
 		 261 aa  223  3e-57  Cryptobacterium curtum DSM 15641  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  57.02 
 
 		 221 aa  222  4e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal  1 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  54.94 
 
 		 222 aa  222  4e-57  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  56.03 
 
 		 220 aa  221  4.9999999999999996e-57  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal  1 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  52.32 
 
 		 223 aa  221  6e-57  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal  1 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  53.85 
 
 		 242 aa  221  8e-57  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  54.55 
 
 		 225 aa  220  9.999999999999999e-57  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal  1 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.02 
 
 		 229 aa  220  9.999999999999999e-57  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  54.55 
 
 		 221 aa  220  9.999999999999999e-57  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal  1 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  54.11 
 
 		 217 aa  220  1.9999999999999999e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  53.65 
 
 		 223 aa  218  6e-56  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  51.27 
 
 		 226 aa  218  6e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal  1 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  54.78 
 
 		 234 aa  218  7.999999999999999e-56  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal  1 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  50.61 
 
 		 244 aa  217  1e-55  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal  1 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  50.87 
 
 		 218 aa  217  1e-55  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  52.4 
 
 		 226 aa  217  2e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  50.44 
 
 		 221 aa  216  2e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  53.71 
 
 		 222 aa  216  2.9999999999999998e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal  1 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  52.38 
 
 		 221 aa  215  5e-55  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  52.17 
 
 		 225 aa  215  5e-55  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  54.31 
 
 		 225 aa  215  5e-55  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  52.34 
 
 		 221 aa  214  9e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  53.75 
 
 		 239 aa  214  9e-55  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.49 
 
 		 236 aa  214  9e-55  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  51.09 
 
 		 218 aa  214  9.999999999999999e-55  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  52.17 
 
 		 231 aa  214  9.999999999999999e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal  1 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  53.28 
 
 		 217 aa  214  9.999999999999999e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  53.02 
 
 		 224 aa  213  1.9999999999999998e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  54.11 
 
 		 222 aa  213  1.9999999999999998e-54  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  54.19 
 
 		 215 aa  212  3.9999999999999995e-54  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  51.29 
 
 		 224 aa  211  7e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013131  Caci_6094  two component transcriptional regulator, LuxR family  54.55 
 
 		 235 aa  211  9e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.634688  normal  0.121163 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  50.22 
 
 		 225 aa  211  1e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal  1 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  50.43 
 
 		 230 aa  210  2e-53  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  54.78 
 
 		 224 aa  209  2e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal  1 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.56 
 
 		 222 aa  209  3e-53  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  50.22 
 
 		 223 aa  209  3e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.172592 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  51.3 
 
 		 226 aa  209  4e-53  Conexibacter woesei DSM 14684  Bacteria  normal  1  hitchhiker  0.00432991 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  50.65 
 
 		 234 aa  208  5e-53  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_4857  two component transcriptional regulator, LuxR family  50.64 
 
 		 234 aa  208  6e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.243741 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  50.22 
 
 		 217 aa  207  1e-52  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  52.17 
 
 		 220 aa  206  2e-52  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  51.72 
 
 		 215 aa  207  2e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  50 
 
 		 228 aa  206  2e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  45.04 
 
 		 261 aa  205  4e-52  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_007333  Tfu_1403  LuxR response regulator receiver  50.44 
 
 		 214 aa  205  5e-52  Thermobifida fusca YX  Bacteria  normal  0.676683  n/a   
 
 
-
 
NC_010816  BLD_0671  putative response regulator  49.17 
 
 		 248 aa  205  6e-52  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  48.93 
 
 		 230 aa  204  7e-52  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  49.79 
 
 		 226 aa  204  7e-52  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal  1 
 
 
-
 
NC_013947  Snas_5265  two component transcriptional regulator, LuxR family  51.09 
 
 		 218 aa  204  9e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  51.98 
 
 		 228 aa  204  1e-51  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  49.78 
 
 		 215 aa  203  2e-51  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  50.65 
 
 		 224 aa  203  2e-51  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  48.28 
 
 		 241 aa  203  2e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  48.71 
 
 		 233 aa  203  2e-51  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.72 
 
 		 230 aa  203  2e-51  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  49.12 
 
 		 228 aa  202  3e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal  1 
 
 
-
 
NC_012669  Bcav_3028  two component transcriptional regulator, LuxR family  51.98 
 
 		 225 aa  202  3e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.211566  decreased coverage  0.0000266978 
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.16 
 
 		 244 aa  201  6e-51  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  48.48 
 
 		 228 aa  201  6e-51  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
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