28 homologs were found in PanDaTox collection
for query gene CPR_1481 on replicon NC_008262
Organism: Clostridium perfringens SM101



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008261  CPF_1751  sensor histidine kinase VirS  93.88 
 
 
440 aa  770  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.0035916  n/a   
 
 
-
 
NC_008262  CPR_1481  sensor histidine kinase VirS  100 
 
 
441 aa  853  Clostridium perfringens SM101  Bacteria  decreased coverage  1.61061e-06  n/a   
 
 
-
 
NC_013521  Sked_02250  histidine kinase  27.92 
 
 
450 aa  127  5e-28  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0469  ATP-binding region ATPase domain protein  30.98 
 
 
444 aa  126  1e-27  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_2269  signal transduction histidine kinase regulating citrate/malate metabolism  31.88 
 
 
442 aa  118  3e-25  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0499  sensor histidine kinase  32.65 
 
 
431 aa  97.4  4e-19  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  2.46195e-05  n/a   
 
 
-
 
NC_010001  Cphy_3117  signal transduction histidine kinase regulating citrate/malate metabolism  27.94 
 
 
342 aa  91.3  4e-17  Clostridium phytofermentans ISDg  Bacteria  normal  0.853672  n/a   
 
 
-
 
NC_010001  Cphy_1601  signal transduction histidine kinase regulating citrate/malate metabolism  23.29 
 
 
446 aa  84.7  3e-15  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.00658825  n/a   
 
 
-
 
NC_011830  Dhaf_2424  signal transduction histidine kinase regulating citrate/malate metabolism  25.35 
 
 
423 aa  81.6  3e-14  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2346  signal transduction histidine kinase regulating citrate/malate metabolism  27.57 
 
 
609 aa  80.5  5e-14  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.600899 
 
 
-
 
NC_011898  Ccel_2641  signal transduction histidine kinase regulating citrate/malate metabolism  22.13 
 
 
423 aa  77  7e-13  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0487  sensor histidine kinase  33.63 
 
 
431 aa  75.9  1e-12  Clostridium perfringens SM101  Bacteria  normal  0.0885624  n/a   
 
 
-
 
NC_013204  Elen_0430  ATP-binding region ATPase domain protein  20.74 
 
 
313 aa  74.3  4e-12  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  1.57774e-05 
 
 
-
 
NC_011898  Ccel_2647  signal transduction histidine kinase regulating citrate/malate metabolism  22.77 
 
 
426 aa  68.6  2e-10  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE0032  histidine kinase-related ATPase, putative  27 
 
 
248 aa  65.9  1e-09  Treponema denticola ATCC 35405  Bacteria  hitchhiker  7.37644e-06  n/a   
 
 
-
 
NC_009012  Cthe_2545  signal transduction histidine kinase regulating citrate/malate metabolism  23.6 
 
 
361 aa  65.5  2e-09  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.290644  n/a   
 
 
-
 
NC_010001  Cphy_0975  signal transduction histidine kinase regulating citrate/malate metabolism  28.02 
 
 
242 aa  64.3  4e-09  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_0401  signal transduction histidine kinase regulating citrate/malate metabolism  28.07 
 
 
479 aa  55.8  1e-06  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_008532  STER_0582  signal transduction protein  24.88 
 
 
431 aa  56.2  1e-06  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_2401  signal transduction histidine kinase regulating citrate/malate metabolism  26.9 
 
 
456 aa  54.7  4e-06  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.283788  n/a   
 
 
-
 
NC_010424  Daud_0745  signal transduction histidine kinase regulating citrate/malate metabolism  19.39 
 
 
460 aa  54.3  4e-06  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0499  signal transduction histidine kinase regulating citrate/malate metabolism  29.53 
 
 
287 aa  52.8  1e-05  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.000111074  n/a   
 
 
-
 
NC_011830  Dhaf_3688  signal transduction histidine kinase regulating citrate/malate metabolism  24.03 
 
 
280 aa  50.8  5e-05  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_3457  signal transduction histidine kinase regulating citrate/malate metabolism  28.11 
 
 
443 aa  48.5  0.0002  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0904  signal transduction histidine kinase regulating citrate/malate metabolism  23.92 
 
 
241 aa  47  0.0006  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1814  ATP-binding region ATPase domain protein  19.82 
 
 
614 aa  46.6  0.0008  Eggerthella lenta DSM 2243  Bacteria  normal  0.211625  normal  0.35963 
 
 
-
 
NC_011899  Hore_01630  signal transduction histidine kinase regulating citrate/malate metabolism  21.67 
 
 
325 aa  46.2  0.001  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_14600  signal transduction histidine kinase regulating citrate/malate metabolism  25.89 
 
 
445 aa  43.5  0.007  Halothermothrix orenii H 168  Bacteria  hitchhiker  2.27922e-05  n/a   
 
 
-
 
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