15 homologs were found in PanDaTox collection
for query gene CPR_0463 on replicon NC_008262
Organism: Clostridium perfringens SM101



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008262  CPR_0463  hypothetical protein  100 
 
 
244 aa  486  1e-136  Clostridium perfringens SM101  Bacteria  decreased coverage  2.02427e-06  n/a   
 
 
-
 
NC_008261  CPF_0603  hypothetical protein  45.74 
 
 
246 aa  216  3e-55  Clostridium perfringens ATCC 13124  Bacteria  decreased coverage  5.00963e-05  n/a   
 
 
-
 
NC_013165  Shel_12360  LICD family protein  27.96 
 
 
241 aa  78.6  9e-14  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_012039  Cla_0296  hypothetical protein  27.31 
 
 
398 aa  57.8  1e-07  Campylobacter lari RM2100  Bacteria  normal  0.840944  n/a   
 
 
-
 
NC_009438  Sputcn32_2618  hypothetical protein  37.36 
 
 
281 aa  57.4  2e-07  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1451  methyltransferase type 11  25.52 
 
 
523 aa  48.1  0.0001  Nocardioides sp. JS614  Bacteria  normal  0.182574  n/a   
 
 
-
 
NC_010655  Amuc_1750  LPS biosynthesis protein-like protein  50 
 
 
338 aa  47  0.0003  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0890  LicD family protein  22.28 
 
 
454 aa  45.4  0.0007  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.147531 
 
 
-
 
NC_008262  CPR_0589  LicD family protein  46 
 
 
266 aa  43.9  0.002  Clostridium perfringens SM101  Bacteria  hitchhiker  9.65792e-05  n/a   
 
 
-
 
NC_010655  Amuc_1746  LicD family protein  54.55 
 
 
319 aa  43.5  0.003  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1495  LicD family protein  21.98 
 
 
454 aa  43.1  0.004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0746  LicD family protein  23.43 
 
 
539 aa  42.7  0.005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.833471 
 
 
-
 
NC_013721  HMPREF0424_1186  LICD Protein Family  38.1 
 
 
384 aa  42  0.008  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_008688  Pden_5030  hypothetical protein  23.87 
 
 
424 aa  42.4  0.008  Paracoccus denitrificans PD1222  Bacteria  normal  0.118348  normal 
 
 
-
 
NC_007802  Jann_0820  hypothetical protein  23.23 
 
 
291 aa  42  0.008  Jannaschia sp. CCS1  Bacteria  normal  normal  0.894594 
 
 
-
 
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