More than 300 homologs were found in PanDaTox collection
for query gene Bphyt_6726 on replicon NC_010676
Organism: Burkholderia phytofirmans PsJN



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010676  Bphyt_6726  binding-protein-dependent transport systems inner membrane component  100 
 
 
269 aa  541  1e-153  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_5370  binding-protein-dependent transport systems inner membrane component  92.22 
 
 
270 aa  509  1e-143  Burkholderia phymatum STM815  Bacteria  normal  normal  0.593461 
 
 
-
 
NC_003295  RSc3049  transmembrane ABC transporter protein  85.5 
 
 
276 aa  471  1e-132  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.0698875 
 
 
-
 
NC_012856  Rpic12D_2984  binding-protein-dependent transport systems inner membrane component  85.88 
 
 
276 aa  473  1e-132  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3331  binding-protein-dependent transport systems inner membrane component  84.33 
 
 
277 aa  473  1e-132  Ralstonia pickettii 12J  Bacteria  normal  normal  0.619722 
 
 
-
 
NC_007908  Rfer_3673  binding-protein-dependent transport systems inner membrane component  79.85 
 
 
270 aa  442  1e-123  Rhodoferax ferrireducens T118  Bacteria  normal  0.0159617  n/a   
 
 
-
 
NC_007948  Bpro_0481  binding-protein-dependent transport systems inner membrane component  79.77 
 
 
270 aa  440  9.999999999999999e-123  Polaromonas sp. JS666  Bacteria  hitchhiker  0.00885853  normal 
 
 
-
 
NC_011992  Dtpsy_0379  binding-protein-dependent transport systems inner membrane component  78.24 
 
 
270 aa  434  1e-121  Acidovorax ebreus TPSY  Bacteria  hitchhiker  0.000739004  n/a   
 
 
-
 
NC_010002  Daci_1028  binding-protein-dependent transport systems inner membrane component  78.63 
 
 
271 aa  435  1e-121  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_4389  binding-protein-dependent transport systems inner membrane component  78.38 
 
 
267 aa  432  1e-120  Paracoccus denitrificans PD1222  Bacteria  normal  0.998448  normal  0.127678 
 
 
-
 
NC_008752  Aave_0607  binding-protein-dependent transport systems inner membrane component  76.67 
 
 
270 aa  433  1e-120  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0387  binding-protein-dependent transport systems inner membrane component  78.24 
 
 
270 aa  434  1e-120  Acidovorax sp. JS42  Bacteria  normal  0.579392  normal 
 
 
-
 
NC_007347  Reut_A2206  binding-protein dependent transport system inner membrane protein  76.21 
 
 
273 aa  430  1e-119  Ralstonia eutropha JMP134  Bacteria  normal  0.91702  n/a   
 
 
-
 
NC_009428  Rsph17025_1204  binding-protein-dependent transport systems inner membrane component  77.22 
 
 
267 aa  430  1e-119  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.286919  normal  0.719506 
 
 
-
 
NC_007973  Rmet_2231  binding-protein-dependent transport systems inner membrane component  75.37 
 
 
276 aa  428  1e-119  Cupriavidus metallidurans CH34  Bacteria  normal  0.0964612  normal  0.170787 
 
 
-
 
NC_007493  RSP_2665  ABC sugar (glycerol) transporter, inner membrane subunit  76.45 
 
 
267 aa  426  1e-118  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2319  binding-protein-dependent transport systems inner membrane component  77.1 
 
 
270 aa  426  1e-118  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.170215  normal  0.495822 
 
 
-
 
NC_009049  Rsph17029_1323  binding-protein-dependent transport systems inner membrane component  76.45 
 
 
267 aa  426  1e-118  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2907  binding-protein-dependent transport systems inner membrane component  77.22 
 
 
274 aa  425  1e-118  Sinorhizobium medicae WSM419  Bacteria  normal  0.395793  normal 
 
 
-
 
NC_009439  Pmen_2045  binding-protein-dependent transport systems inner membrane component  75.95 
 
 
266 aa  423  1e-117  Pseudomonas mendocina ymp  Bacteria  normal  0.0321729  normal  0.632864 
 
 
-
 
NC_004578  PSPTO_3737  ABC transporter, permease protein  75.95 
 
 
266 aa  422  1e-117  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.103253  n/a   
 
 
-
 
NC_007005  Psyr_1740  binding-protein dependent transport system inner membrane protein  77.34 
 
 
266 aa  421  1e-117  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.139142  normal  0.986821 
 
 
-
 
NC_007492  Pfl01_3632  binding-protein dependent transport system inner membrane protein  77.52 
 
 
266 aa  423  1e-117  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.469815 
 
 
-
 
NC_009668  Oant_3980  binding-protein-dependent transport systems inner membrane component  77.04 
 
 
296 aa  423  1e-117  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.780875  n/a   
 
 
-
 
NC_002947  PP_2263  binding-protein-dependent transport systems inner membrane component  78.71 
 
 
266 aa  419  1e-116  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.000192828 
 
 
-
 
NC_012791  Vapar_3393  binding-protein-dependent transport systems inner membrane component  80.24 
 
 
270 aa  418  1e-116  Variovorax paradoxus S110  Bacteria  normal  0.0838291  n/a   
 
 
-
 
NC_009512  Pput_3475  binding-protein-dependent transport systems inner membrane component  78.71 
 
 
266 aa  419  1e-116  Pseudomonas putida F1  Bacteria  normal  0.926994  hitchhiker  0.00696056 
 
 
-
 
NC_010501  PputW619_1736  binding-protein-dependent transport systems inner membrane component  78.31 
 
 
266 aa  417  1e-116  Pseudomonas putida W619  Bacteria  normal  0.78404  normal  0.23922 
 
 
-
 
NC_010322  PputGB1_1896  binding-protein-dependent transport systems inner membrane component  77.91 
 
 
266 aa  415  9.999999999999999e-116  Pseudomonas putida GB-1  Bacteria  normal  normal  0.141997 
 
 
-
 
NC_007802  Jann_4101  binding-protein-dependent transport systems inner membrane component  75.68 
 
 
274 aa  417  9.999999999999999e-116  Jannaschia sp. CCS1  Bacteria  normal  0.612527  normal  0.65761 
 
 
-
 
NC_008709  Ping_3171  ABC sugar (glycerol) transporter binding protein inner membrane protein  76.36 
 
 
266 aa  416  9.999999999999999e-116  Psychromonas ingrahamii 37  Bacteria  normal  0.550599  normal 
 
 
-
 
NC_010511  M446_1971  binding-protein-dependent transport systems inner membrane component  74.81 
 
 
265 aa  412  1e-114  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0377  binding-protein-dependent transport systems inner membrane component  77.02 
 
 
297 aa  413  1e-114  Marinomonas sp. MWYL1  Bacteria  normal  0.135278  normal  0.390253 
 
 
-
 
NC_008044  TM1040_2420  binding-protein-dependent transport systems inner membrane component  73.66 
 
 
265 aa  410  1e-113  Ruegeria sp. TM1040  Bacteria  normal  0.0828687  normal  0.714962 
 
 
-
 
NC_011004  Rpal_4891  binding-protein-dependent transport systems inner membrane component  72.52 
 
 
268 aa  405  1.0000000000000001e-112  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4213  binding-protein-dependent transport systems inner membrane component  72.52 
 
 
268 aa  406  1.0000000000000001e-112  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.586864 
 
 
-
 
NC_007958  RPD_4065  binding-protein-dependent transport systems inner membrane component  72.52 
 
 
268 aa  405  1.0000000000000001e-112  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.641778 
 
 
-
 
NC_013440  Hoch_5934  binding-protein-dependent transport systems inner membrane component  74.53 
 
 
272 aa  405  1.0000000000000001e-112  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0836514  normal 
 
 
-
 
NC_011989  Avi_0098  ABC transporter membrane spanning protein (sugar)  77.18 
 
 
241 aa  398  9.999999999999999e-111  Agrobacterium vitis S4  Bacteria  normal  0.152339  n/a   
 
 
-
 
NC_009485  BBta_2225  putative sugar ABC transport system, permease component  70.99 
 
 
268 aa  399  9.999999999999999e-111  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.279383  normal  0.0771654 
 
 
-
 
NC_009952  Dshi_3131  sugar ABC transporter  72.94 
 
 
265 aa  397  1e-109  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.471841  normal 
 
 
-
 
NC_007925  RPC_1365  binding-protein-dependent transport systems inner membrane component  74.19 
 
 
275 aa  394  1e-108  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.374311  normal 
 
 
-
 
NC_012852  Rleg_5979  binding-protein-dependent transport systems inner membrane component  72.76 
 
 
303 aa  393  1e-108  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011371  Rleg2_6466  binding-protein-dependent transport systems inner membrane component  72.76 
 
 
303 aa  392  1e-108  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_1595  binding-protein-dependent transport systems inner membrane component  76.01 
 
 
272 aa  391  1e-108  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1443  binding-protein-dependent transport systems inner membrane component  73.66 
 
 
265 aa  384  1e-106  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0301431  n/a   
 
 
-
 
NC_007963  Csal_2091  binding-protein-dependent transport systems inner membrane component  68.09 
 
 
258 aa  382  1e-105  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.322391  n/a   
 
 
-
 
NC_013223  Dret_2097  binding-protein-dependent transport systems inner membrane component  56.11 
 
 
265 aa  321  6e-87  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.0908154 
 
 
-
 
NC_007802  Jann_4107  binding-protein-dependent transport systems inner membrane component  47 
 
 
261 aa  204  1e-51  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_009429  Rsph17025_3582  hypothetical protein  33.45 
 
 
278 aa  172  3.9999999999999995e-42  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.928396  normal  0.804079 
 
 
-
 
NC_010003  Pmob_0307  binding-protein-dependent transport systems inner membrane component  33.58 
 
 
274 aa  168  7e-41  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_0549  ABC-type sugar / sn-glycerol-3-phosphate transport system permease protein ugpE  32.47 
 
 
272 aa  164  1.0000000000000001e-39  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2053  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
285 aa  163  3e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3493  binding-protein-dependent transport systems inner membrane component  31.97 
 
 
316 aa  160  2e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.552575 
 
 
-
 
NC_007908  Rfer_0952  binding-protein-dependent transport systems inner membrane component  34.24 
 
 
271 aa  159  4e-38  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2697  binding-protein-dependent transport systems inner membrane component  39 
 
 
293 aa  157  2e-37  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_3058  binding-protein-dependent transport systems inner membrane component  34.36 
 
 
286 aa  155  5.0000000000000005e-37  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0285  binding-protein-dependent transport systems inner membrane component  33.57 
 
 
279 aa  152  4e-36  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.424252  normal 
 
 
-
 
NC_011369  Rleg2_0256  binding-protein-dependent transport systems inner membrane component  33.7 
 
 
278 aa  150  2e-35  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_0701  binding-protein-dependent transport systems inner membrane component  29.19 
 
 
315 aa  150  3e-35  Polaromonas sp. JS666  Bacteria  normal  0.338666  normal 
 
 
-
 
NC_008010  Dgeo_2818  binding-protein-dependent transport systems inner membrane component  31.1 
 
 
255 aa  148  1.0000000000000001e-34  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3341  putative sugar ABC transporter, permease protein  32.16 
 
 
292 aa  147  2.0000000000000003e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  0.22127  normal  0.118781 
 
 
-
 
NC_010625  Bphy_6369  binding-protein-dependent transport systems inner membrane component  28.77 
 
 
317 aa  146  3e-34  Burkholderia phymatum STM815  Bacteria  normal  0.568723  normal 
 
 
-
 
NC_011899  Hore_00800  binding-protein-dependent transport systems inner membrane component  31.47 
 
 
280 aa  147  3e-34  Halothermothrix orenii H 168  Bacteria  normal  0.303025  n/a   
 
 
-
 
NC_013526  Tter_2490  binding-protein-dependent transport systems inner membrane component  32.62 
 
 
279 aa  145  8.000000000000001e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.961495  n/a   
 
 
-
 
NC_013521  Sked_03720  carbohydrate ABC transporter membrane protein  33.59 
 
 
298 aa  145  9e-34  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.652933 
 
 
-
 
NC_004310  BR0237  sugar ABC transporter, permease protein  30.15 
 
 
291 aa  144  1e-33  Brucella suis 1330  Bacteria  normal  0.963709  n/a   
 
 
-
 
NC_009505  BOV_0230  sugar ABC transporter, permease protein  30.15 
 
 
291 aa  144  1e-33  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4709  binding-protein-dependent transport systems inner membrane component  32.46 
 
 
278 aa  144  2e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_0311  binding-protein-dependent transport systems inner membrane component  31.13 
 
 
292 aa  143  2e-33  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.466995  n/a   
 
 
-
 
NC_010003  Pmob_1490  binding-protein-dependent transport systems inner membrane component  30.4 
 
 
277 aa  144  2e-33  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4987  binding-protein-dependent transport systems inner membrane component  29.41 
 
 
319 aa  144  2e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2701  binding-protein-dependent transport systems inner membrane component  33.09 
 
 
275 aa  144  2e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0563997  n/a   
 
 
-
 
NC_009621  Smed_5860  binding-protein-dependent transport systems inner membrane component  34.31 
 
 
319 aa  143  3e-33  Sinorhizobium medicae WSM419  Bacteria  normal  0.235146  normal 
 
 
-
 
NC_008786  Veis_2013  binding-protein-dependent transport systems inner membrane component  30.04 
 
 
285 aa  143  3e-33  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.81  normal  0.395958 
 
 
-
 
NC_010676  Bphyt_5636  binding-protein-dependent transport systems inner membrane component  28.24 
 
 
317 aa  142  4e-33  Burkholderia phytofirmans PsJN  Bacteria  normal  0.330167  normal 
 
 
-
 
NC_009636  Smed_0188  binding-protein-dependent transport systems inner membrane component  30.59 
 
 
277 aa  142  5e-33  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3685  binding-protein-dependent transport systems inner membrane component  33.59 
 
 
299 aa  142  5e-33  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2899  binding-protein-dependent transport systems inner membrane component  28.62 
 
 
316 aa  142  6e-33  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008043  TM1040_3397  binding-protein-dependent transport systems inner membrane component  31.37 
 
 
287 aa  142  6e-33  Ruegeria sp. TM1040  Bacteria  normal  0.141396  normal  0.659935 
 
 
-
 
NC_013595  Sros_5740  binding-protein-dependent transport systems inner membrane component  34.59 
 
 
289 aa  142  8e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.872391  normal  0.176709 
 
 
-
 
NC_009667  Oant_0352  binding-protein-dependent transport systems inner membrane component  30.68 
 
 
277 aa  141  9.999999999999999e-33  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_03310  binding-protein-dependent transport systems inner membrane component  25.87 
 
 
288 aa  141  9.999999999999999e-33  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0050  binding-protein-dependent transport systems inner membrane component  29.72 
 
 
305 aa  141  9.999999999999999e-33  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2422  binding-protein-dependent transport systems inner membrane component  30.8 
 
 
277 aa  141  9.999999999999999e-33  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.161716 
 
 
-
 
NC_012853  Rleg_5696  binding-protein-dependent transport systems inner membrane component  32.58 
 
 
283 aa  140  1.9999999999999998e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.697019  normal  0.0828938 
 
 
-
 
NC_007963  Csal_2612  binding-protein-dependent transport systems inner membrane component  29.78 
 
 
276 aa  140  3e-32  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2609  binding-protein-dependent transport systems inner membrane component  33.71 
 
 
272 aa  139  3.9999999999999997e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.139734  normal 
 
 
-
 
NC_009620  Smed_4977  binding-protein-dependent transport systems inner membrane component  30.35 
 
 
288 aa  139  3.9999999999999997e-32  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0547171 
 
 
-
 
NC_009952  Dshi_3142  sugar ABC transporter  29.52 
 
 
275 aa  139  4.999999999999999e-32  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.367291  normal 
 
 
-
 
NC_011899  Hore_04600  binding-protein-dependent transport systems inner membrane component  27.65 
 
 
277 aa  139  6e-32  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_1049  binding-protein-dependent transport systems inner membrane component  31.45 
 
 
280 aa  139  7e-32  Paracoccus denitrificans PD1222  Bacteria  normal  0.622209  normal 
 
 
-
 
NC_012850  Rleg_2428  binding-protein-dependent transport systems inner membrane component  29.18 
 
 
317 aa  137  1e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.443713  normal  0.627473 
 
 
-
 
NC_010003  Pmob_0029  binding-protein-dependent transport systems inner membrane component  30.69 
 
 
283 aa  137  2e-31  Petrotoga mobilis SJ95  Bacteria  unclonable  0.0000000511748  n/a   
 
 
-
 
NC_013159  Svir_11600  carbohydrate ABC transporter membrane protein  32.28 
 
 
283 aa  137  2e-31  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_0280  ABC transporter, inner membrane subunit  32.05 
 
 
280 aa  136  4e-31  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.787211  n/a   
 
 
-
 
NC_011661  Dtur_1741  binding-protein-dependent transport systems inner membrane component  28.83 
 
 
281 aa  135  8e-31  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_012858  Rleg_6763  binding-protein-dependent transport systems inner membrane component  31.44 
 
 
276 aa  134  9.999999999999999e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.18605  normal 
 
 
-
 
NC_007802  Jann_3555  binding-protein-dependent transport systems inner membrane component  30 
 
 
279 aa  135  9.999999999999999e-31  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3714  binding-protein-dependent transport systems inner membrane component  28.74 
 
 
294 aa  133  1.9999999999999998e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.273471 
 
 
-
 
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