7 homologs were found in PanDaTox collection
for query gene Bphyt_3492 on replicon NC_010681
Organism: Burkholderia phytofirmans PsJN



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010681  Bphyt_3492  hypothetical protein  100 
 
 
53 aa  106  9.000000000000001e-23  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.000201943  decreased coverage  0.000024613 
 
 
-
 
NC_010551  BamMC406_0467  putative transmembrane protein  65.96 
 
 
47 aa  69.7  0.00000000001  Burkholderia ambifaria MC40-6  Bacteria  normal  0.202441  normal 
 
 
-
 
NC_003295  RSc2877  hypothetical protein  57.5 
 
 
93 aa  57.8  0.00000005  Ralstonia solanacearum GMI1000  Bacteria  normal  0.242531  normal 
 
 
-
 
NC_010682  Rpic_3119  putative transmembrane protein  57.5 
 
 
77 aa  56.6  0.0000001  Ralstonia pickettii 12J  Bacteria  normal  0.489194  normal  0.0475584 
 
 
-
 
NC_012856  Rpic12D_2754  hypothetical protein  57.5 
 
 
77 aa  56.6  0.0000001  Ralstonia pickettii 12D  Bacteria  normal  0.142216  normal 
 
 
-
 
NC_007347  Reut_A3019  hypothetical protein  54.76 
 
 
66 aa  52.4  0.000002  Ralstonia eutropha JMP134  Bacteria  normal  0.469602  n/a   
 
 
-
 
NC_007973  Rmet_3174  hypothetical protein  41.51 
 
 
65 aa  49.3  0.00002  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
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