More than 300 homologs were found in PanDaTox collection
for query gene Bphy_4058 on replicon NC_010623
Organism: Burkholderia phymatum STM815



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010623  Bphy_4058  binding-protein-dependent transport systems inner membrane component  100 
 
 
309 aa  616  1e-175  Burkholderia phymatum STM815  Bacteria  normal  normal  0.801646 
 
 
-
 
NC_007952  Bxe_B0419  ABC sugar transporter, inner membrane subunit  86.82 
 
 
296 aa  535  1e-151  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_7207  binding-protein-dependent transport systems inner membrane component  86.15 
 
 
296 aa  534  1e-151  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0749  sugar ABC transporter, permease protein, putative  59.36 
 
 
289 aa  354  1e-96  Brucella suis 1330  Bacteria  normal  0.444567  n/a   
 
 
-
 
NC_009504  BOV_A0699  putative sugar ABC transporter, permease protein  59.01 
 
 
289 aa  352  4e-96  Brucella ovis ATCC 25840  Bacteria  normal  0.383075  n/a   
 
 
-
 
NC_009668  Oant_3896  binding-protein-dependent transport systems inner membrane component  59.49 
 
 
289 aa  342  4e-93  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0438989  n/a   
 
 
-
 
NC_008699  Noca_1419  binding-protein-dependent transport systems inner membrane component  48.21 
 
 
314 aa  249  4e-65  Nocardioides sp. JS614  Bacteria  normal  0.906597  n/a   
 
 
-
 
NC_013202  Hmuk_0943  binding-protein-dependent transport systems inner membrane component  36.07 
 
 
312 aa  189  5.999999999999999e-47  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.301949 
 
 
-
 
NC_011899  Hore_00790  binding-protein-dependent transport systems inner membrane component  39.24 
 
 
262 aa  188  1e-46  Halothermothrix orenii H 168  Bacteria  normal  0.772214  n/a   
 
 
-
 
NC_013131  Caci_2171  binding-protein-dependent transport systems inner membrane component  38.08 
 
 
312 aa  187  2e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.623971  normal 
 
 
-
 
NC_013131  Caci_6903  binding-protein-dependent transport systems inner membrane component  34.74 
 
 
324 aa  187  2e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0156181  normal  0.0141251 
 
 
-
 
NC_012848  Rleg_4864  binding-protein-dependent transport systems inner membrane component  33.81 
 
 
319 aa  183  3e-45  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.243677  normal  0.263269 
 
 
-
 
NC_014165  Tbis_1885  binding-protein-dependent transporter inner membrane component  35.96 
 
 
317 aa  182  4.0000000000000006e-45  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.44963 
 
 
-
 
NC_014210  Ndas_2364  binding-protein-dependent transport systems inner membrane component  37.21 
 
 
661 aa  182  9.000000000000001e-45  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.824137  normal  0.513217 
 
 
-
 
NC_012669  Bcav_1681  binding-protein-dependent transport systems inner membrane component  35.56 
 
 
316 aa  180  2e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.130846  normal 
 
 
-
 
NC_011369  Rleg2_3668  binding-protein-dependent transport systems inner membrane component  32.74 
 
 
299 aa  180  2.9999999999999997e-44  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_1896  binding-protein-dependent transport systems inner membrane component  37.28 
 
 
296 aa  179  4.999999999999999e-44  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  1.0543799999999999e-20 
 
 
-
 
NC_013131  Caci_3596  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
325 aa  175  9.999999999999999e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.295531  normal 
 
 
-
 
NC_010003  Pmob_0028  binding-protein-dependent transport systems inner membrane component  35.11 
 
 
300 aa  173  3.9999999999999995e-42  Petrotoga mobilis SJ95  Bacteria  unclonable  0.0000000378352  n/a   
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  33.88 
 
 
316 aa  171  1e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_0949  permease protein of sugar ABC transporter  36.33 
 
 
292 aa  171  1e-41  Synechococcus elongatus PCC 7942  Bacteria  normal  0.688345  normal 
 
 
-
 
NC_010320  Teth514_0396  binding-protein-dependent transport systems inner membrane component  34.39 
 
 
307 aa  171  1e-41  Thermoanaerobacter sp. X514  Bacteria  normal  0.701562  n/a   
 
 
-
 
NC_013595  Sros_3340  binding-protein-dependent transport systems inner membrane component  37.14 
 
 
338 aa  171  1e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.781064  normal  0.179396 
 
 
-
 
NC_010505  Mrad2831_2891  binding-protein-dependent transport systems inner membrane component  35.25 
 
 
318 aa  170  2e-41  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.400754  normal  0.350094 
 
 
-
 
NC_009832  Spro_2296  binding-protein-dependent transport systems inner membrane component  36.92 
 
 
304 aa  170  3e-41  Serratia proteamaculans 568  Bacteria  normal  0.44429  normal 
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  35.29 
 
 
288 aa  170  3e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_007494  RSP_3673  ABC sugar transporter, inner membrane subunit  36.05 
 
 
308 aa  169  7e-41  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.246744  n/a   
 
 
-
 
NC_009050  Rsph17029_3408  binding-protein-dependent transport systems inner membrane component  36.05 
 
 
308 aa  169  8e-41  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.166359  normal  0.855546 
 
 
-
 
NC_011366  Rleg2_5689  binding-protein-dependent transport systems inner membrane component  33.68 
 
 
294 aa  168  9e-41  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_20460  binding-protein-dependent transport systems inner membrane component  32.18 
 
 
321 aa  168  1e-40  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000522199  n/a   
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  32.45 
 
 
309 aa  166  5e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009953  Sare_0748  binding-protein-dependent transport systems inner membrane component  33.63 
 
 
337 aa  166  5.9999999999999996e-40  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00168888 
 
 
-
 
NC_009667  Oant_0353  binding-protein-dependent transport systems inner membrane component  35.03 
 
 
317 aa  165  8e-40  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0740262  n/a   
 
 
-
 
NC_011988  Avi_6238  ABC transporter membrane spanning protein (maltose)  33.69 
 
 
294 aa  165  9e-40  Agrobacterium vitis S4  Bacteria  normal  0.602267  n/a   
 
 
-
 
NC_009636  Smed_0187  binding-protein-dependent transport systems inner membrane component  35.64 
 
 
307 aa  165  9e-40  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_0971  binding-protein-dependent transport systems inner membrane component  32.38 
 
 
293 aa  165  1.0000000000000001e-39  Thermotoga sp. RQ2  Bacteria  normal  0.0994152  n/a   
 
 
-
 
NC_009486  Tpet_0955  binding-protein-dependent transport systems inner membrane component  32.38 
 
 
293 aa  165  1.0000000000000001e-39  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_012858  Rleg_6633  binding-protein-dependent transport systems inner membrane component  32.86 
 
 
294 aa  164  2.0000000000000002e-39  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.61386 
 
 
-
 
NC_013525  Tter_0398  binding-protein-dependent transport systems inner membrane component  29.1 
 
 
312 aa  164  2.0000000000000002e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011894  Mnod_1414  binding-protein-dependent transport systems inner membrane component  30.56 
 
 
314 aa  164  2.0000000000000002e-39  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2109  binding-protein-dependent transport systems inner membrane component  37.86 
 
 
312 aa  164  2.0000000000000002e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.376983 
 
 
-
 
NC_009718  Fnod_0449  binding-protein-dependent transport systems inner membrane component  30.11 
 
 
295 aa  164  2.0000000000000002e-39  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.982578  n/a   
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  34.74 
 
 
300 aa  164  2.0000000000000002e-39  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_22990  binding-protein-dependent transport systems inner membrane component  30.9 
 
 
286 aa  163  3e-39  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000108841  n/a   
 
 
-
 
NC_009620  Smed_4642  binding-protein-dependent transport systems inner membrane component  33.82 
 
 
294 aa  163  3e-39  Sinorhizobium medicae WSM419  Bacteria  normal  0.288658  normal  0.0756683 
 
 
-
 
NC_014211  Ndas_4929  binding-protein-dependent transport systems inner membrane component  33.69 
 
 
311 aa  163  4.0000000000000004e-39  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.155715  normal 
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  36.06 
 
 
306 aa  163  4.0000000000000004e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_02940  carbohydrate ABC transporter membrane protein  31.51 
 
 
318 aa  162  5.0000000000000005e-39  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0870  binding-protein-dependent transport systems inner membrane component  33.96 
 
 
309 aa  162  7e-39  Nocardioides sp. JS614  Bacteria  normal  0.800905  n/a   
 
 
-
 
NC_010511  M446_0821  binding-protein-dependent transport systems inner membrane component  32.99 
 
 
314 aa  162  9e-39  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011366  Rleg2_5714  binding-protein-dependent transport systems inner membrane component  30.62 
 
 
310 aa  161  1e-38  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.568061 
 
 
-
 
NC_013172  Bfae_01820  permease component of ABC-type sugar transporter  33.8 
 
 
312 aa  161  1e-38  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  31.48 
 
 
319 aa  161  1e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2098  binding-protein-dependent transport systems inner membrane component  29.9 
 
 
317 aa  160  2e-38  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.529199  hitchhiker  0.000478367 
 
 
-
 
NC_013923  Nmag_3872  binding-protein-dependent transport systems inner membrane component  36 
 
 
315 aa  160  2e-38  Natrialba magadii ATCC 43099  Archaea  normal  0.0566045  n/a   
 
 
-
 
NC_012880  Dd703_0068  binding-protein-dependent transport systems inner membrane component  34.74 
 
 
315 aa  159  4e-38  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5336  binding-protein-dependent transport systems inner membrane component  32.26 
 
 
310 aa  159  4e-38  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.369054 
 
 
-
 
NC_013131  Caci_2610  binding-protein-dependent transport systems inner membrane component  33.68 
 
 
334 aa  159  5e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.17709  normal 
 
 
-
 
NC_008148  Rxyl_1990  binding-protein-dependent transport systems inner membrane component  31.34 
 
 
306 aa  159  6e-38  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.306567  n/a   
 
 
-
 
NC_007760  Adeh_4135  ABC sugar transporter, inner membrane subunit  33.33 
 
 
569 aa  159  7e-38  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_4266  binding-protein-dependent transport systems inner membrane component  33.68 
 
 
569 aa  159  8e-38  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4288  binding-protein-dependent transport systems inner membrane component  33.68 
 
 
569 aa  159  8e-38  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  34.05 
 
 
299 aa  158  9e-38  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0474  binding-protein-dependent transport systems inner membrane component  32.71 
 
 
291 aa  158  1e-37  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3466  binding-protein-dependent transport systems inner membrane component  34.3 
 
 
342 aa  158  1e-37  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0172  binding-protein-dependent transport systems inner membrane component  32.48 
 
 
324 aa  157  2e-37  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3645  binding-protein-dependent transport systems inner membrane component  32.18 
 
 
318 aa  157  2e-37  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.415839 
 
 
-
 
NC_009675  Anae109_1663  binding-protein-dependent transport systems inner membrane component  33.46 
 
 
310 aa  157  2e-37  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.0803077  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  34.21 
 
 
307 aa  157  3e-37  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_007958  RPD_3321  binding-protein-dependent transport systems inner membrane component  30.82 
 
 
317 aa  156  3e-37  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.5641  normal 
 
 
-
 
NC_013093  Amir_0349  binding-protein-dependent transport systems inner membrane component  35.59 
 
 
305 aa  156  3e-37  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_1755  ABC transporter permease  32.75 
 
 
312 aa  156  3e-37  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.576454  normal  0.392142 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  34.21 
 
 
307 aa  157  3e-37  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  32.03 
 
 
306 aa  156  4e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_007760  Adeh_3121  ABC sugar transporter, inner membrane subunit  32.14 
 
 
317 aa  156  5.0000000000000005e-37  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4329  binding-protein-dependent transport systems inner membrane component  31.9 
 
 
309 aa  155  7e-37  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0434884 
 
 
-
 
NC_011891  A2cp1_3315  binding-protein-dependent transport systems inner membrane component  32.14 
 
 
314 aa  155  8e-37  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.453212  n/a   
 
 
-
 
NC_011145  AnaeK_3229  binding-protein-dependent transport systems inner membrane component  32.14 
 
 
314 aa  155  9e-37  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0305  sugar ABC transporter, permease protein  32.41 
 
 
325 aa  154  1e-36  Brucella suis 1330  Bacteria  normal  0.0474821  n/a   
 
 
-
 
NC_011004  Rpal_3959  binding-protein-dependent transport systems inner membrane component  31.42 
 
 
315 aa  154  1e-36  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_2071  binding-protein-dependent transport systems inner membrane component  33.46 
 
 
345 aa  154  2e-36  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.0000672298  normal 
 
 
-
 
NC_011899  Hore_04590  binding-protein-dependent transport systems inner membrane component  34.36 
 
 
294 aa  154  2e-36  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_3772  binding-protein-dependent transport systems inner membrane component  32.99 
 
 
289 aa  154  2e-36  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1844  binding-protein-dependent transport systems inner membrane component  32.87 
 
 
291 aa  154  2e-36  Actinosynnema mirum DSM 43827  Bacteria  normal  0.476032  n/a   
 
 
-
 
NC_010003  Pmob_1491  binding-protein-dependent transport systems inner membrane component  31.6 
 
 
289 aa  153  2.9999999999999998e-36  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_3555  putative ABC transporter permease protein  30.63 
 
 
317 aa  154  2.9999999999999998e-36  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.34254  normal 
 
 
-
 
NC_012669  Bcav_1699  binding-protein-dependent transport systems inner membrane component  31.97 
 
 
315 aa  153  4e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.258357  normal 
 
 
-
 
NC_009504  BOV_A0280  sugar ABC transporter, permease protein  31.89 
 
 
325 aa  153  4e-36  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5199  binding-protein-dependent transport systems inner membrane component  32.26 
 
 
312 aa  153  4e-36  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0867066 
 
 
-
 
NC_009616  Tmel_1819  binding-protein-dependent transport systems inner membrane component  31.8 
 
 
293 aa  152  5e-36  Thermosipho melanesiensis BI429  Bacteria  normal  0.215175  n/a   
 
 
-
 
NC_013131  Caci_2623  binding-protein-dependent transport systems inner membrane component  31.88 
 
 
330 aa  152  7e-36  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0584633  normal 
 
 
-
 
NC_009668  Oant_2941  binding-protein-dependent transport systems inner membrane component  31.27 
 
 
320 aa  152  8e-36  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.974377  n/a   
 
 
-
 
NC_013595  Sros_5739  ABC transporter permease  32.04 
 
 
318 aa  152  8.999999999999999e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.184804 
 
 
-
 
NC_013159  Svir_11610  carbohydrate ABC transporter membrane protein  35.92 
 
 
295 aa  151  1e-35  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.798667 
 
 
-
 
NC_008578  Acel_2048  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
332 aa  151  1e-35  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_0804  binding-protein-dependent transport systems inner membrane component  32.81 
 
 
337 aa  151  1e-35  Salinispora tropica CNB-440  Bacteria  normal  0.606963  normal 
 
 
-
 
NC_007973  Rmet_0009  binding-protein-dependent transport systems inner membrane component  33.59 
 
 
310 aa  151  2e-35  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1297  binding-protein-dependent transport systems inner membrane component  32.85 
 
 
279 aa  151  2e-35  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.983189  normal 
 
 
-
 
NC_008687  Pden_4441  binding-protein-dependent transport systems inner membrane component  31.15 
 
 
320 aa  150  2e-35  Paracoccus denitrificans PD1222  Bacteria  normal  0.0272526  normal 
 
 
-
 
NC_010552  BamMC406_4681  binding-protein-dependent transport systems inner membrane component  35.38 
 
 
289 aa  150  3e-35  Burkholderia ambifaria MC40-6  Bacteria  normal  0.205446  normal 
 
 
-
 
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