More than 300 homologs were found in PanDaTox collection
for query gene Bphy_0944 on replicon NC_010622
Organism: Burkholderia phymatum STM815



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010622  Bphy_0944  carboxymuconolactone decarboxylase  100 
 
 
132 aa  265  1e-70  Burkholderia phymatum STM815  Bacteria  normal  0.292875  normal 
 
 
-
 
NC_007951  Bxe_A2370  putative carboxymuconolactone decarboxylase  86.29 
 
 
148 aa  226  7e-59  Burkholderia xenovorans LB400  Bacteria  decreased coverage  0.006176  normal  0.29565 
 
 
-
 
NC_010681  Bphyt_1817  Carboxymuconolactone decarboxylase  83.33 
 
 
152 aa  224  3e-58  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.291528 
 
 
-
 
NC_007651  BTH_I2209  carboxymuconolactone decarboxylase family protein  84.55 
 
 
132 aa  218  1.9999999999999999e-56  Burkholderia thailandensis E264  Bacteria  normal  0.231556  n/a   
 
 
-
 
NC_006348  BMA1373  carboxymuconolactone decarboxylase family protein  79.67 
 
 
132 aa  211  1.9999999999999998e-54  Burkholderia mallei ATCC 23344  Bacteria  normal  0.378973  n/a   
 
 
-
 
NC_008836  BMA10229_A0034  carboxymuconolactone decarboxylase family protein  79.67 
 
 
132 aa  211  1.9999999999999998e-54  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0633482  n/a   
 
 
-
 
NC_009080  BMA10247_1134  carboxymuconolactone decarboxylase family protein  79.67 
 
 
132 aa  211  1.9999999999999998e-54  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1863  carboxymuconolactone decarboxylase family protein  79.67 
 
 
132 aa  211  1.9999999999999998e-54  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_2257  4-carboxymuconolactone decarboxylase family protein  78.86 
 
 
132 aa  209  7.999999999999999e-54  Burkholderia pseudomallei 1106a  Bacteria  normal  0.769981  n/a   
 
 
-
 
NC_007434  BURPS1710b_2385  carboxymuconolactone decarboxylase family protein  78.86 
 
 
132 aa  209  7.999999999999999e-54  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_2219  4-carboxymuconolactone decarboxylase family protein  78.86 
 
 
132 aa  209  7.999999999999999e-54  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_1753  carboxymuconolactone decarboxylase  83.33 
 
 
144 aa  200  6e-51  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.165068 
 
 
-
 
NC_010508  Bcenmc03_1867  carboxymuconolactone decarboxylase  81.06 
 
 
144 aa  199  7e-51  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.159406  hitchhiker  0.000781215 
 
 
-
 
NC_008390  Bamb_1781  carboxymuconolactone decarboxylase  82.54 
 
 
144 aa  198  1.9999999999999998e-50  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008062  Bcen_6236  carboxymuconolactone decarboxylase  80.92 
 
 
144 aa  197  3e-50  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.291446  n/a   
 
 
-
 
NC_008542  Bcen2424_1843  carboxymuconolactone decarboxylase  80.92 
 
 
144 aa  197  3e-50  Burkholderia cenocepacia HI2424  Bacteria  normal  0.19287  n/a   
 
 
-
 
NC_007510  Bcep18194_A5144  carboxymuconolactone decarboxylase  80.15 
 
 
144 aa  197  3.9999999999999996e-50  Burkholderia sp. 383  Bacteria  normal  0.0349025  normal  0.605964 
 
 
-
 
NC_010084  Bmul_1430  carboxymuconolactone decarboxylase  82.54 
 
 
145 aa  197  6e-50  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.346703  hitchhiker  0.00433375 
 
 
-
 
NC_012791  Vapar_3680  Carboxymuconolactone decarboxylase  69.63 
 
 
152 aa  186  7e-47  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_2188  carboxymuconolactone decarboxylase  73.39 
 
 
129 aa  186  8e-47  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_1479  carboxymuconolactone decarboxylase  67.48 
 
 
133 aa  179  1e-44  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0089  carboxymuconolactone decarboxylase  63.93 
 
 
128 aa  173  5e-43  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0083  carboxymuconolactone decarboxylase family protein  63.2 
 
 
128 aa  173  9e-43  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_003910  CPS_3139  putative 4-carboxymuconolactone decarboxylase  62.6 
 
 
132 aa  172  9.999999999999999e-43  Colwellia psychrerythraea 34H  Bacteria  normal  0.287088  n/a   
 
 
-
 
NC_011769  DvMF_2653  Carboxymuconolactone decarboxylase  70.34 
 
 
138 aa  171  3.9999999999999995e-42  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009052  Sbal_4266  carboxymuconolactone decarboxylase  63.64 
 
 
128 aa  170  6.999999999999999e-42  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0089  carboxymuconolactone decarboxylase  63.64 
 
 
128 aa  170  6.999999999999999e-42  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_0086  Carboxymuconolactone decarboxylase  63.64 
 
 
128 aa  170  6.999999999999999e-42  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0083  carboxymuconolactone decarboxylase  62.81 
 
 
128 aa  169  1e-41  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_4049  carboxymuconolactone decarboxylase  62.6 
 
 
134 aa  168  3e-41  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_3873  carboxymuconolactone decarboxylase  60.98 
 
 
125 aa  167  5e-41  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1568  carboxymuconolactone decarboxylase  76.42 
 
 
109 aa  162  1.0000000000000001e-39  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.630321 
 
 
-
 
NC_013457  VEA_001374  4-carboxymuconolactone decarboxylase  60.83 
 
 
125 aa  161  3e-39  Vibrio sp. Ex25  Bacteria  decreased coverage  0.00000000210016  n/a   
 
 
-
 
NC_013131  Caci_7471  Carboxymuconolactone decarboxylase  63.49 
 
 
299 aa  160  4.0000000000000004e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0837  putative carboxymuconolactone decarboxylase  79.38 
 
 
110 aa  157  4e-38  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_02340  Carboxymuconolactone decarboxylase  60.98 
 
 
138 aa  151  2e-36  Azotobacter vinelandii DJ  Bacteria  normal  0.0293457  n/a   
 
 
-
 
NC_012856  Rpic12D_2083  Carboxymuconolactone decarboxylase  71.29 
 
 
123 aa  151  2.9999999999999998e-36  Ralstonia pickettii 12D  Bacteria  normal  normal  0.995495 
 
 
-
 
NC_007348  Reut_B5696  carboxymuconolactone decarboxylase  59.5 
 
 
130 aa  147  5e-35  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_2477  Carboxymuconolactone decarboxylase  70.1 
 
 
118 aa  142  1e-33  Ralstonia pickettii 12J  Bacteria  normal  normal  0.333736 
 
 
-
 
NC_008786  Veis_1856  carboxymuconolactone decarboxylase  51.59 
 
 
275 aa  140  6e-33  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.519725  normal  0.376905 
 
 
-
 
NC_013422  Hneap_1703  Carboxymuconolactone decarboxylase  52.85 
 
 
131 aa  138  1.9999999999999998e-32  Halothiobacillus neapolitanus c2  Bacteria  normal  0.232307  n/a   
 
 
-
 
NC_008554  Sfum_2098  carboxymuconolactone decarboxylase  52.85 
 
 
295 aa  131  3e-30  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.327283  normal  0.0268513 
 
 
-
 
NC_011832  Mpal_2473  Carboxymuconolactone decarboxylase  55.26 
 
 
260 aa  129  2.0000000000000002e-29  Methanosphaerula palustris E1-9c  Archaea  normal  0.15664  normal 
 
 
-
 
NC_008726  Mvan_4934  carboxymuconolactone decarboxylase  51.26 
 
 
150 aa  126  1.0000000000000001e-28  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.249654  decreased coverage  0.00938968 
 
 
-
 
NC_009712  Mboo_0016  carboxymuconolactone decarboxylase  56.14 
 
 
261 aa  125  2.0000000000000002e-28  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_007516  Syncc9605_0521  carboxymuconolactone decarboxylase family protein  47.46 
 
 
127 aa  118  1.9999999999999998e-26  Synechococcus sp. CC9605  Bacteria  normal  normal  0.66457 
 
 
-
 
NC_014158  Tpau_4060  Carboxymuconolactone decarboxylase  48.87 
 
 
136 aa  119  1.9999999999999998e-26  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.735994  n/a   
 
 
-
 
NC_008527  LACR_2239  gamma-carboxymuconolactone decarboxylase  46.96 
 
 
122 aa  115  1.9999999999999998e-25  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_1188  carboxymuconolactone decarboxylase  45.45 
 
 
128 aa  98.2  3e-20  Jannaschia sp. CCS1  Bacteria  normal  0.373506  normal 
 
 
-
 
NC_008009  Acid345_3042  Alpha/beta hydrolase  39.47 
 
 
380 aa  88.2  4e-17  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.440112  normal 
 
 
-
 
NC_011365  Gdia_0952  Carboxymuconolactone decarboxylase  42.02 
 
 
127 aa  87  8e-17  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_2504  4-carboxymuconolactone decarboxylase  39.17 
 
 
129 aa  85.9  2e-16  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2296  4-carboxymuconolactone decarboxylase  38.98 
 
 
123 aa  84.3  5e-16  Pseudomonas putida W619  Bacteria  normal  0.0265397  normal  0.659303 
 
 
-
 
NC_009952  Dshi_2361  hypothetical protein  54.17 
 
 
127 aa  83.2  0.000000000000001  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.850012 
 
 
-
 
NC_010002  Daci_2568  carboxymuconolactone decarboxylase  42.7 
 
 
132 aa  83.2  0.000000000000001  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.136392 
 
 
-
 
NC_013595  Sros_7932  4-carboxymuconolactone decarboxylase  41 
 
 
132 aa  83.2  0.000000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238463  normal  0.729855 
 
 
-
 
NC_007974  Rmet_4016  3-oxoadipate enol-lactonase  38.66 
 
 
392 aa  83.2  0.000000000000001  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00993372  normal 
 
 
-
 
NC_004578  PSPTO_2342  4-carboxymuconolactone decarboxylase  37.19 
 
 
132 aa  82.4  0.000000000000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2126  carboxymuconolactone decarboxylase  37.19 
 
 
132 aa  82.4  0.000000000000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.191574  normal  0.330128 
 
 
-
 
NC_009656  PSPA7_0318  gamma-carboxymuconolactone decarboxylase  39.6 
 
 
133 aa  81.6  0.000000000000003  Pseudomonas aeruginosa PA7  Bacteria  normal  0.623335  n/a   
 
 
-
 
NC_008463  PA14_02850  gamma-carboxymuconolactone decarboxylase  39.6 
 
 
133 aa  81.6  0.000000000000003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.00181902 
 
 
-
 
NC_013093  Amir_5081  Carboxymuconolactone decarboxylase  42.5 
 
 
122 aa  81.3  0.000000000000004  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2974  4-carboxymuconolactone decarboxylase  39.2 
 
 
125 aa  81.3  0.000000000000004  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_3215  carboxymuconolactone decarboxylase  47.5 
 
 
124 aa  80.9  0.000000000000006  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B1954  hypothetical protein  45.1 
 
 
298 aa  80.5  0.000000000000007  Burkholderia xenovorans LB400  Bacteria  normal  0.513058  normal  0.328983 
 
 
-
 
NC_009620  Smed_4207  4-carboxymuconolactone decarboxylase  38.1 
 
 
135 aa  80.5  0.000000000000008  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_38170  4-carboxymuconolactone decarboxylase  38.61 
 
 
130 aa  80.1  0.000000000000009  Azotobacter vinelandii DJ  Bacteria  normal  0.230767  n/a   
 
 
-
 
NC_008699  Noca_1011  4-carboxymuconolactone decarboxylase  37.1 
 
 
402 aa  80.1  0.00000000000001  Nocardioides sp. JS614  Bacteria  normal  0.101506  n/a   
 
 
-
 
NC_010524  Lcho_2144  carboxymuconolactone decarboxylase  45.56 
 
 
268 aa  79.3  0.00000000000001  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000390984 
 
 
-
 
NC_013131  Caci_2396  Carboxymuconolactone decarboxylase  40.95 
 
 
130 aa  79  0.00000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.938127  normal 
 
 
-
 
NC_007355  Mbar_A0768  4-carboxymuconolactone decarboxylase  34.75 
 
 
250 aa  78.6  0.00000000000003  Methanosarcina barkeri str. Fusaro  Archaea  normal  hitchhiker  0.000000904176 
 
 
-
 
NC_007348  Reut_B5022  4-carboxymuconolactone decarboxylase / 3-oxoadipate enol-lactonase  36.75 
 
 
396 aa  77.8  0.00000000000004  Ralstonia eutropha JMP134  Bacteria  normal  0.391243  n/a   
 
 
-
 
NC_013947  Snas_2322  4-carboxymuconolactone decarboxylase  39.42 
 
 
129 aa  77.8  0.00000000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.254356  normal 
 
 
-
 
NC_009092  Shew_2734  4-carboxymuconolactone decarboxylase  40.16 
 
 
127 aa  77.8  0.00000000000005  Shewanella loihica PV-4  Bacteria  normal  0.888805  hitchhiker  0.0000628107 
 
 
-
 
NC_010465  YPK_2194  carboxymuconolactone decarboxylase  38.95 
 
 
140 aa  77.8  0.00000000000005  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_2086  carboxymuconolactone decarboxylase family protein  38.95 
 
 
140 aa  77.8  0.00000000000005  Yersinia pseudotuberculosis IP 31758  Bacteria  decreased coverage  0.000000000641307  n/a   
 
 
-
 
NC_012858  Rleg_7078  4-carboxymuconolactone decarboxylase  38.21 
 
 
134 aa  77.4  0.00000000000005  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0342158  normal 
 
 
-
 
NC_010159  YpAngola_A2482  carboxymuconolactone decarboxylase family protein  38.95 
 
 
140 aa  77.8  0.00000000000005  Yersinia pestis Angola  Bacteria  decreased coverage  0.0000000156087  normal  0.0594202 
 
 
-
 
NC_008781  Pnap_2661  carboxymuconolactone decarboxylase  38.21 
 
 
125 aa  77.8  0.00000000000005  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_011366  Rleg2_5940  4-carboxymuconolactone decarboxylase  37.29 
 
 
134 aa  77.4  0.00000000000006  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.1646 
 
 
-
 
NC_012917  PC1_0608  Carboxymuconolactone decarboxylase  48.28 
 
 
99 aa  77.4  0.00000000000006  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_0571  4-carboxymuconolactone decarboxylase  37.5 
 
 
134 aa  77.4  0.00000000000006  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0563  4-carboxymuconolactone decarboxylase  35.16 
 
 
393 aa  77.4  0.00000000000007  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.260619  normal 
 
 
-
 
NC_010501  PputW619_1021  4-carboxymuconolactone decarboxylase  38.61 
 
 
132 aa  77  0.00000000000008  Pseudomonas putida W619  Bacteria  normal  normal  0.0594936 
 
 
-
 
NC_008392  Bamb_6219  carboxymuconolactone decarboxylase  32.8 
 
 
363 aa  77  0.00000000000008  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3382  4-carboxymuconolactone decarboxylase  37.5 
 
 
134 aa  77  0.00000000000009  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_4433  4-carboxymuconolactone decarboxylase  37.62 
 
 
130 aa  76.3  0.0000000000001  Pseudomonas putida GB-1  Bacteria  normal  0.145648  hitchhiker  0.00893399 
 
 
-
 
NC_009954  Cmaq_0470  carboxymuconolactone decarboxylase  36.11 
 
 
238 aa  76.6  0.0000000000001  Caldivirga maquilingensis IC-167  Archaea  normal  0.0123066  normal  0.044727 
 
 
-
 
NC_009512  Pput_4342  4-carboxymuconolactone decarboxylase  37.62 
 
 
130 aa  76.3  0.0000000000001  Pseudomonas putida F1  Bacteria  normal  0.0210047  normal  0.0491818 
 
 
-
 
NC_008687  Pden_3257  carboxymuconolactone decarboxylase  38.71 
 
 
148 aa  76.3  0.0000000000001  Paracoccus denitrificans PD1222  Bacteria  normal  0.146193  normal  0.0594926 
 
 
-
 
NC_002947  PP_1381  4-carboxymuconolactone decarboxylase  37.62 
 
 
130 aa  75.9  0.0000000000002  Pseudomonas putida KT2440  Bacteria  normal  0.760953  normal  0.559328 
 
 
-
 
NC_003295  RSc2249  putative 4-carboxymuconolactone decarboxylase protein  35.43 
 
 
131 aa  75.9  0.0000000000002  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0833929  normal 
 
 
-
 
NC_004578  PSPTO_4478  4-carboxymuconolactone decarboxylase  46.81 
 
 
127 aa  75.9  0.0000000000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3552  4-carboxymuconolactone decarboxylase  36.72 
 
 
134 aa  75.9  0.0000000000002  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_1901  carboxymuconolactone decarboxylase  36.92 
 
 
129 aa  75.9  0.0000000000002  Polaromonas sp. JS666  Bacteria  normal  normal  0.508941 
 
 
-
 
NC_009484  Acry_3004  3-oxoadipate enol-lactonase  43.82 
 
 
390 aa  75.9  0.0000000000002  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4169  carboxymuconolactone decarboxylase  45.74 
 
 
127 aa  75.1  0.0000000000003  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.944589  normal 
 
 
-
 
NC_007492  Pfl01_1275  4-carboxymuconolactone decarboxylase  36.63 
 
 
130 aa  75.1  0.0000000000003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.537713  normal 
 
 
-
 
NC_007778  RPB_0830  carboxymuconolactone decarboxylase  38.68 
 
 
126 aa  75.1  0.0000000000003  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_5750  4-carboxymuconolactone decarboxylase  33.33 
 
 
129 aa  74.7  0.0000000000004  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.0988817 
 
 
-
 
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