41 homologs were found in PanDaTox collection
for query gene Bind_2753 on replicon NC_010581
Organism: Beijerinckia indica subsp. indica ATCC 9039



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010581  Bind_2753  hypothetical protein  100 
 
 		 433 aa  869    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_2929  hypothetical protein  37.91 
 
 		 443 aa  243  3e-63  Dechloromonas aromatica RCB  Bacteria  normal  0.0484025  normal  1 
 
 
-
 
NC_010511  M446_1545  TRAP-type uncharacterized transport system periplasmic component-like protein  34.99 
 
 		 468 aa  228  2e-58  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_5694  TRAP-type uncharacterized transport system periplasmic component-like protein  35.26 
 
 		 477 aa  225  1e-57  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010581  Bind_0899  hypothetical protein  32.86 
 
 		 437 aa  224  3e-57  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.727607  normal  0.541745 
 
 
-
 
NC_011666  Msil_2797  TRAP-type uncharacterized transport system periplasmic component-like protein  35.26 
 
 		 485 aa  220  3.9999999999999997e-56  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_011666  Msil_3025  TRAP transporter solute receptor, TAXI family  31.28 
 
 		 441 aa  187  2e-46  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010510  Mrad2831_5881  TRAP-type uncharacterized transport system periplasmic component-like protein  35.37 
 
 		 440 aa  179  8e-44  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.810377 
 
 
-
 
NC_009485  BBta_0249  hypothetical protein  29.72 
 
 		 448 aa  167  2e-40  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_2259  TRAP-type uncharacterized transport system periplasmic component-like protein  30.02 
 
 		 469 aa  166  1.0000000000000001e-39  Methylobacterium populi BJ001  Bacteria  normal  0.466386  normal  0.36502 
 
 
-
 
NC_010172  Mext_2302  TRAP-type uncharacterized transport system periplasmic component-like protein  30.5 
 
 		 474 aa  164  2.0000000000000002e-39  Methylobacterium extorquens PA1  Bacteria  normal  0.172272  hitchhiker  0.00762339 
 
 
-
 
NC_011757  Mchl_2577  TRAP-type uncharacterized transport system periplasmic component-like protein  30.5 
 
 		 469 aa  164  3e-39  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.301233 
 
 
-
 
NC_007778  RPB_0100  TRAP transporter solute receptor TAXI family protein  28.87 
 
 		 480 aa  157  4e-37  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_0342  TRAP transporter solute receptor, TAXI family  30.79 
 
 		 423 aa  155  1e-36  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0450847  n/a   
 
 
-
 
NC_011757  Mchl_0184  TRAP-type uncharacterized transport system periplasmic component-like protein  30.11 
 
 		 453 aa  155  1e-36  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.864216  normal  0.611675 
 
 
-
 
NC_010505  Mrad2831_5654  TRAP-type uncharacterized transport system periplasmic component-like protein  29.41 
 
 		 471 aa  154  2.9999999999999998e-36  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_0239  TRAP-type uncharacterized transport system periplasmic component-like protein  30.11 
 
 		 453 aa  154  4e-36  Methylobacterium extorquens PA1  Bacteria  normal  0.264256  normal  1 
 
 
-
 
NC_007958  RPD_0702  TRAP transporter solute receptor TAXI family protein  28.18 
 
 		 480 aa  154  4e-36  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.871087  normal  1 
 
 
-
 
NC_011004  Rpal_0409  TRAP transporter solute receptor, TAXI family  28.41 
 
 		 462 aa  152  8e-36  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.309942  n/a   
 
 
-
 
NC_010505  Mrad2831_3542  TRAP-type uncharacterized transport system periplasmic component-like protein  28.4 
 
 		 472 aa  151  2e-35  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.919124 
 
 
-
 
NC_010511  M446_2036  TRAP-type uncharacterized transport system periplasmic component-like protein  28.54 
 
 		 463 aa  150  4e-35  Methylobacterium sp. 4-46  Bacteria  normal  1  hitchhiker  0.00372211 
 
 
-
 
NC_007925  RPC_2525  TRAP transporter solute receptor TAXI family protein  27.21 
 
 		 486 aa  149  7e-35  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.839724  normal  0.154925 
 
 
-
 
NC_011004  Rpal_2087  hypothetical protein  28.57 
 
 		 466 aa  148  2.0000000000000003e-34  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.073016  n/a   
 
 
-
 
NC_011894  Mnod_0519  TRAP-type uncharacterized transport system periplasmic component-like protein  28.97 
 
 		 463 aa  146  8.000000000000001e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_2265  TRAP transporter solute receptor TAXI family protein  30.48 
 
 		 442 aa  146  8.000000000000001e-34  Methylobacterium sp. 4-46  Bacteria  normal  1  decreased coverage  0.00194673 
 
 
-
 
NC_011894  Mnod_0107  TRAP-type uncharacterized transport system periplasmic component-like protein  28.15 
 
 		 453 aa  145  2e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010581  Bind_3430  TRAP transporter solute receptor TAXI family protein  28.93 
 
 		 461 aa  144  3e-33  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.199051 
 
 
-
 
NC_007958  RPD_1959  hypothetical protein  26.79 
 
 		 467 aa  138  2e-31  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_2760  TRAP transporter solute receptor, TAXI family  25.68 
 
 		 433 aa  135  9.999999999999999e-31  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010505  Mrad2831_4219  TRAP-type uncharacterized transport system periplasmic component-like protein  27.38 
 
 		 465 aa  135  1.9999999999999998e-30  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.340628 
 
 
-
 
NC_007778  RPB_3495  hypothetical protein  26.57 
 
 		 465 aa  130  4.0000000000000003e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007964  Nham_0909  hypothetical protein  25.65 
 
 		 491 aa  121  1.9999999999999998e-26  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_1581  TRAP transporter solute receptor TAXI family protein  28 
 
 		 457 aa  120  4.9999999999999996e-26  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.193293 
 
 
-
 
NC_009485  BBta_6537  hypothetical protein  25.62 
 
 		 467 aa  118  1.9999999999999998e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.866176  normal  1 
 
 
-
 
NC_010511  M446_4743  TRAP-type uncharacterized transport system periplasmic component-like protein  28.02 
 
 		 457 aa  115  1.0000000000000001e-24  Methylobacterium sp. 4-46  Bacteria  normal  0.704005  normal  1 
 
 
-
 
NC_011894  Mnod_3511  TRAP-type uncharacterized transport system periplasmic component-like protein  40.31 
 
 		 179 aa  105  2e-21  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011729  PCC7424_4573  TRAP transporter solute receptor, TAXI family  23.71 
 
 		 446 aa  94.7  3e-18  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_011884  Cyan7425_4597  TRAP transporter solute receptor, TAXI family  21.82 
 
 		 454 aa  87  5e-16  Cyanothece sp. PCC 7425  Bacteria  normal  0.244351  normal  1 
 
 
-
 
NC_011894  Mnod_2418  TRAP-type uncharacterized transport system periplasmic component-like protein  29.27 
 
 		 176 aa  81.3  0.00000000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_4331  TRAP transporter solute receptor, TAXI family  21.39 
 
 		 453 aa  69.3  0.0000000001  Cyanothece sp. PCC 7425  Bacteria  normal  0.794472  normal  1 
 
 
-
 
NC_009714  CHAB381_0539  immunogenic protein  27.36 
 
 		 313 aa  45.1  0.002  Campylobacter hominis ATCC BAA-381  Bacteria  normal  1  n/a   
 
 
-
 
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