More than 300 homologs were found in PanDaTox collection
for query gene Bfae_17020 on replicon NC_013172
Organism: Brachybacterium faecium DSM 4810



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013172  Bfae_17020  ABC-type sugar transport system, periplasmic component  100 
 
 
431 aa  861    Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00301962  n/a   
 
 
-
 
NC_013521  Sked_03920  carbohydrate-binding protein  40.42 
 
 
437 aa  308  2.0000000000000002e-82  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_5099  extracellular solute-binding protein family 1  37.5 
 
 
444 aa  295  1e-78  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.291523  normal  0.0224239 
 
 
-
 
NC_013174  Jden_0310  extracellular solute-binding protein family 1  37.88 
 
 
440 aa  286  4e-76  Jonesia denitrificans DSM 20603  Bacteria  normal  0.0877495  normal  0.113221 
 
 
-
 
NC_013172  Bfae_04000  ABC-type sugar transport system, periplasmic component  38.73 
 
 
445 aa  264  3e-69  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0381  extracellular solute-binding protein family 1  36.71 
 
 
445 aa  231  1e-59  Jonesia denitrificans DSM 20603  Bacteria  normal  0.491759  normal 
 
 
-
 
NC_013172  Bfae_04070  ABC-type sugar transport system, periplasmic component  33.58 
 
 
444 aa  190  4e-47  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1927  extracellular solute-binding protein family 1  32.53 
 
 
439 aa  189  1e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3304  extracellular solute-binding protein family 1  31.77 
 
 
441 aa  189  1e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  hitchhiker  0.00753481 
 
 
-
 
NC_012669  Bcav_4059  extracellular solute-binding protein family 1  34.32 
 
 
440 aa  187  3e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0048  extracellular solute-binding protein family 1  28.97 
 
 
434 aa  184  2.0000000000000003e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_06560  ABC-type sugar transport system, periplasmic component  30.2 
 
 
453 aa  179  9e-44  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_4419  extracellular solute-binding protein family 1  29.41 
 
 
456 aa  161  2e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1454  extracellular solute-binding protein family 1  30.2 
 
 
445 aa  160  5e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.71759  normal 
 
 
-
 
NC_013174  Jden_0101  extracellular solute-binding protein family 1  30.56 
 
 
438 aa  158  2e-37  Jonesia denitrificans DSM 20603  Bacteria  normal  0.494877  normal  0.060225 
 
 
-
 
NC_013093  Amir_2574  extracellular solute-binding protein family 1  27.59 
 
 
449 aa  156  5.0000000000000005e-37  Actinosynnema mirum DSM 43827  Bacteria  normal  0.316894  n/a   
 
 
-
 
NC_010816  BLD_1762  MalE-type ABC sugar transport system periplasmic component  28.21 
 
 
438 aa  157  5.0000000000000005e-37  Bifidobacterium longum DJO10A  Bacteria  decreased coverage  0.0000740157  n/a   
 
 
-
 
NC_010816  BLD_1008  MalE-type ABC sugar transport system periplasmic component  29 
 
 
449 aa  154  2e-36  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_0923  MalE-type ABC sugar transport system periplasmic component  29.61 
 
 
450 aa  148  2.0000000000000003e-34  Bifidobacterium longum DJO10A  Bacteria  normal  0.293658  n/a   
 
 
-
 
NC_009664  Krad_4188  extracellular solute-binding protein family 1  30.56 
 
 
454 aa  134  3.9999999999999996e-30  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.643354  normal  0.841697 
 
 
-
 
NC_013721  HMPREF0424_1064  extracellular solute-binding protein  27.48 
 
 
480 aa  129  1.0000000000000001e-28  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.075314 
 
 
-
 
NC_010816  BLD_0921  MalE-type ABC sugar transport system periplasmic component  27.14 
 
 
458 aa  127  3e-28  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_0922  MalE-type ABC sugar transport system periplasmic component  24.72 
 
 
447 aa  115  2.0000000000000002e-24  Bifidobacterium longum DJO10A  Bacteria  normal  0.755265  n/a   
 
 
-
 
NC_013131  Caci_2031  extracellular solute-binding protein family 1  24.57 
 
 
442 aa  94.7  2e-18  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.298737 
 
 
-
 
NC_009972  Haur_3641  extracellular solute-binding protein  25.21 
 
 
444 aa  91.3  3e-17  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_0719  extracellular solute-binding protein family 1  24.46 
 
 
413 aa  90.9  4e-17  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.0236757  n/a   
 
 
-
 
NC_013739  Cwoe_3983  extracellular solute-binding protein family 1  26.15 
 
 
456 aa  87.8  4e-16  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2733  extracellular solute-binding protein family 1  25.63 
 
 
434 aa  84.3  0.000000000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0602915  normal  0.13145 
 
 
-
 
NC_012669  Bcav_1680  extracellular solute-binding protein family 1  26.1 
 
 
430 aa  84  0.000000000000005  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.173253  normal 
 
 
-
 
NC_011371  Rleg2_6524  extracellular solute-binding protein family 1  25 
 
 
424 aa  83.6  0.000000000000007  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.514278  normal  0.451088 
 
 
-
 
NC_013947  Snas_0203  extracellular solute-binding protein family 1  27.35 
 
 
441 aa  82.4  0.00000000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.346278  normal  0.123927 
 
 
-
 
NC_012852  Rleg_6112  extracellular solute-binding protein family 1  24.73 
 
 
424 aa  82.4  0.00000000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.521338  normal 
 
 
-
 
NC_010320  Teth514_2201  extracellular solute-binding protein  24.05 
 
 
420 aa  82  0.00000000000002  Thermoanaerobacter sp. X514  Bacteria  normal  0.455559  n/a   
 
 
-
 
NC_013947  Snas_3121  extracellular solute-binding protein family 1  24.37 
 
 
445 aa  80.1  0.00000000000007  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  hitchhiker  0.00116931 
 
 
-
 
NC_011899  Hore_04270  extracellular solute-binding protein family 1  26 
 
 
418 aa  77.8  0.0000000000003  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0238  extracellular solute-binding protein family 1  22.55 
 
 
423 aa  77.8  0.0000000000004  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_013201  Hmuk_3222  extracellular solute-binding protein family 1  24.06 
 
 
457 aa  77.8  0.0000000000004  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.950328  normal  0.818094 
 
 
-
 
NC_011899  Hore_00780  extracellular solute-binding protein family 1  20.05 
 
 
411 aa  77  0.0000000000006  Halothermothrix orenii H 168  Bacteria  normal  0.0480859  n/a   
 
 
-
 
NC_013525  Tter_0829  extracellular solute-binding protein family 1  21.9 
 
 
504 aa  77  0.0000000000006  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012028  Hlac_2862  extracellular solute-binding protein family 1  23.1 
 
 
467 aa  76.6  0.0000000000009  Halorubrum lacusprofundi ATCC 49239  Archaea  n/a    n/a   
 
 
-
 
NC_013411  GYMC61_2731  extracellular solute-binding protein family 1  24.47 
 
 
454 aa  75.9  0.000000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_7725  ABC-type sugar transport system periplasmic component-like protein  27.56 
 
 
420 aa  74.3  0.000000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3251  extracellular solute-binding protein family 1  24.93 
 
 
427 aa  74.3  0.000000000004  Thermobispora bispora DSM 43833  Bacteria  normal  0.829082  normal 
 
 
-
 
NC_013946  Mrub_2808  extracellular solute-binding protein family 1  24.01 
 
 
430 aa  73.9  0.000000000005  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.512241 
 
 
-
 
NC_013526  Tter_2644  extracellular solute-binding protein family 1  23.48 
 
 
431 aa  72.4  0.00000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1215  extracellular solute-binding protein family 1  21.6 
 
 
446 aa  72  0.00000000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  decreased coverage  0.0000064062  n/a   
 
 
-
 
NC_013521  Sked_03090  ABC-type sugar transport system, periplasmic component  25.68 
 
 
419 aa  71.6  0.00000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.033461  normal 
 
 
-
 
NC_013595  Sros_6192  ABC-type sugar transport system periplasmic component-like protein  23.84 
 
 
431 aa  71.6  0.00000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0222852  normal 
 
 
-
 
NC_010320  Teth514_1099  extracellular solute-binding protein  22.54 
 
 
457 aa  70.9  0.00000000004  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3566  extracellular solute-binding protein family 1  25.5 
 
 
434 aa  70.1  0.00000000006  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0143758 
 
 
-
 
NC_013595  Sros_4988  extracellular solute-binding protein  26.96 
 
 
414 aa  70.5  0.00000000006  Streptosporangium roseum DSM 43021  Bacteria  normal  0.601947  normal 
 
 
-
 
NC_013172  Bfae_29320  ABC-type sugar transport system, periplasmic component  26.62 
 
 
443 aa  70.1  0.00000000007  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_1316  extracellular solute-binding protein  23.34 
 
 
423 aa  70.1  0.00000000008  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013172  Bfae_05090  ABC-type sugar transport system, periplasmic component  29.27 
 
 
430 aa  69.3  0.0000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_3771  extracellular solute-binding protein  23.2 
 
 
421 aa  68.6  0.0000000002  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4916  extracellular solute-binding protein  22.51 
 
 
410 aa  68.9  0.0000000002  Sinorhizobium medicae WSM419  Bacteria  normal  0.06645  normal  0.512511 
 
 
-
 
NC_013595  Sros_3538  Maltose-binding periplasmic protein/domains- like protein  22.97 
 
 
406 aa  68.9  0.0000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.385239  normal 
 
 
-
 
NC_011371  Rleg2_6572  extracellular solute-binding protein family 1  22.25 
 
 
410 aa  68.2  0.0000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00103217  normal  0.480926 
 
 
-
 
NC_013131  Caci_7906  extracellular solute-binding protein family 1  29.8 
 
 
420 aa  68.2  0.0000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.819994  normal 
 
 
-
 
NC_013595  Sros_6584  ABC transporter sugar binding protein  22.63 
 
 
437 aa  67.8  0.0000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_01550  ABC-type sugar transport system, periplasmic component  31.52 
 
 
438 aa  67.4  0.0000000005  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2025  extracellular solute-binding protein family 1  23.16 
 
 
434 aa  67.4  0.0000000005  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000000165485  n/a   
 
 
-
 
NC_011981  Avi_7341  sugar ABC transporter sugar-binding protein  23.48 
 
 
426 aa  67.4  0.0000000005  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0523  extracellular solute-binding protein  22.25 
 
 
416 aa  67.4  0.0000000005  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2315  extracellular solute-binding protein  23.51 
 
 
455 aa  67  0.0000000007  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.271919 
 
 
-
 
NC_012852  Rleg_6156  extracellular solute-binding protein family 1  21.68 
 
 
410 aa  66.2  0.000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.889741  hitchhiker  0.000305646 
 
 
-
 
NC_013131  Caci_5330  extracellular solute-binding protein family 1  22.62 
 
 
438 aa  66.2  0.000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.489769  normal  0.341368 
 
 
-
 
NC_013172  Bfae_06270  ABC-type sugar transport system, periplasmic component  26.23 
 
 
426 aa  66.2  0.000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0842  extracellular solute-binding protein family 1  22.68 
 
 
432 aa  65.9  0.000000001  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.516605 
 
 
-
 
NC_014210  Ndas_2036  extracellular solute-binding protein family 1  23.5 
 
 
439 aa  65.5  0.000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.182591  normal  0.899466 
 
 
-
 
NC_014165  Tbis_1891  extracellular solute-binding protein family 1  23.32 
 
 
447 aa  65.1  0.000000002  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.276259 
 
 
-
 
NC_008699  Noca_4632  extracellular solute-binding protein  26.24 
 
 
419 aa  65.1  0.000000002  Nocardioides sp. JS614  Bacteria  normal  0.448727  n/a   
 
 
-
 
NC_011661  Dtur_0508  extracellular solute-binding protein family 1  22.01 
 
 
421 aa  65.5  0.000000002  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.0000506303  n/a   
 
 
-
 
NC_011368  Rleg2_5331  extracellular solute-binding protein family 1  23.16 
 
 
424 aa  64.7  0.000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4136  extracellular solute-binding protein  24.24 
 
 
424 aa  64.7  0.000000003  Sinorhizobium medicae WSM419  Bacteria  normal  0.518326  normal 
 
 
-
 
NC_013530  Xcel_2152  extracellular solute-binding protein family 1  26.38 
 
 
415 aa  64.7  0.000000003  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.410183  n/a   
 
 
-
 
NC_013174  Jden_0513  extracellular solute-binding protein family 1  22.7 
 
 
447 aa  64.7  0.000000003  Jonesia denitrificans DSM 20603  Bacteria  decreased coverage  0.000000038068  hitchhiker  0.000703825 
 
 
-
 
NC_011988  Avi_5398  ABC transporter substrate binding protein (sugar)  21.54 
 
 
403 aa  64.7  0.000000003  Agrobacterium vitis S4  Bacteria  normal  0.14652  n/a   
 
 
-
 
NC_009767  Rcas_1879  extracellular solute-binding protein  23.93 
 
 
452 aa  64.3  0.000000004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.29051 
 
 
-
 
NC_007604  Synpcc7942_2417  transcriptional regulator, ABC transporter  25 
 
 
421 aa  64.3  0.000000005  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.0335393 
 
 
-
 
NC_013526  Tter_2526  extracellular solute-binding protein family 1  24.12 
 
 
520 aa  64.3  0.000000005  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000430481  n/a   
 
 
-
 
NC_010001  Cphy_3317  extracellular solute-binding protein  25.82 
 
 
492 aa  63.9  0.000000005  Clostridium phytofermentans ISDg  Bacteria  unclonable  0.0000000142443  n/a   
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  28 
 
 
422 aa  63.5  0.000000007  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_3572  extracellular solute-binding protein family 1  26.28 
 
 
427 aa  63.5  0.000000007  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.405751  normal 
 
 
-
 
NC_013174  Jden_1882  extracellular solute-binding protein family 1  24.24 
 
 
446 aa  62.4  0.00000001  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.822809 
 
 
-
 
NC_012858  Rleg_6794  extracellular solute-binding protein family 1  24.75 
 
 
430 aa  63.2  0.00000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1785  extracellular solute-binding protein family 1  25.68 
 
 
424 aa  62.4  0.00000001  Actinosynnema mirum DSM 43827  Bacteria  normal  0.155279  n/a   
 
 
-
 
NC_009523  RoseRS_2896  extracellular solute-binding protein  23.65 
 
 
452 aa  62.8  0.00000001  Roseiflexus sp. RS-1  Bacteria  normal  0.034507  normal 
 
 
-
 
NC_013946  Mrub_2730  extracellular solute-binding protein family 1  19.63 
 
 
399 aa  63.2  0.00000001  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0770  extracellular solute-binding protein family 1  24.05 
 
 
444 aa  62  0.00000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_0476  extracellular solute-binding protein family 1  26.14 
 
 
401 aa  62  0.00000002  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_0753  extracellular solute-binding protein  21.89 
 
 
429 aa  62  0.00000002  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00037903  n/a   
 
 
-
 
NC_012669  Bcav_1655  extracellular solute-binding protein family 1  23.74 
 
 
425 aa  61.6  0.00000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.186521  normal  0.186231 
 
 
-
 
NC_013172  Bfae_29010  ABC-type sugar transport system, periplasmic component  23.46 
 
 
434 aa  61.2  0.00000003  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2209  extracellular solute-binding protein family 1  25.16 
 
 
487 aa  60.8  0.00000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_07450  ABC-type sugar transport system, periplasmic component  24.46 
 
 
464 aa  60.5  0.00000005  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_04610  extracellular solute-binding protein family 1  28.47 
 
 
431 aa  60.5  0.00000005  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7695  ABC-type sugar transport system periplasmic component-like protein  22.57 
 
 
435 aa  60.8  0.00000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.397837  normal  0.53163 
 
 
-
 
NC_013172  Bfae_04140  maltose-binding periplasmic protein  24.93 
 
 
449 aa  60.5  0.00000006  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3779  extracellular solute-binding protein family 1  29.23 
 
 
430 aa  60.5  0.00000006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.292836  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>