More than 300 homologs were found in PanDaTox collection
for query gene Bfae_11600 on replicon NC_013172
Organism: Brachybacterium faecium DSM 4810



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  100 
 
 
225 aa  433  1e-121  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  66.05 
 
 
221 aa  255  4e-67  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  63.11 
 
 
225 aa  254  1.0000000000000001e-66  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  61.75 
 
 
225 aa  246  2e-64  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  58.18 
 
 
224 aa  242  3e-63  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  58.14 
 
 
228 aa  237  9e-62  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  58.53 
 
 
218 aa  233  1.0000000000000001e-60  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  57.34 
 
 
241 aa  233  2.0000000000000002e-60  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  59.53 
 
 
224 aa  233  3e-60  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  59.91 
 
 
218 aa  233  3e-60  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  60.55 
 
 
221 aa  231  6e-60  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  61.93 
 
 
215 aa  229  2e-59  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_009921  Franean1_1652  two component LuxR family transcriptional regulator  62.5 
 
 
217 aa  229  2e-59  Frankia sp. EAN1pec  Bacteria  normal  0.495895  normal  0.106337 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  56.88 
 
 
225 aa  228  4e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  55.96 
 
 
222 aa  228  5e-59  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  56.88 
 
 
221 aa  228  6e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  57.47 
 
 
226 aa  227  1e-58  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  58.04 
 
 
227 aa  226  2e-58  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  58.06 
 
 
215 aa  226  2e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  55.05 
 
 
225 aa  226  3e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  55.25 
 
 
221 aa  223  1e-57  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  56.42 
 
 
220 aa  224  1e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  58.45 
 
 
225 aa  223  2e-57  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  59.45 
 
 
220 aa  223  2e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  56.19 
 
 
228 aa  223  2e-57  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  55.86 
 
 
226 aa  222  4e-57  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  56.42 
 
 
225 aa  221  8e-57  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  56.76 
 
 
227 aa  221  9e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  52.94 
 
 
223 aa  220  9.999999999999999e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  54.79 
 
 
239 aa  220  9.999999999999999e-57  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  57.33 
 
 
229 aa  220  1.9999999999999999e-56  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  55.76 
 
 
219 aa  220  1.9999999999999999e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  58.04 
 
 
225 aa  219  3e-56  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  52.97 
 
 
261 aa  217  1e-55  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  53.74 
 
 
214 aa  217  1e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  56.88 
 
 
222 aa  215  4e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  54.31 
 
 
234 aa  215  5e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  56.31 
 
 
227 aa  214  9.999999999999999e-55  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  55.3 
 
 
222 aa  214  9.999999999999999e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  52.97 
 
 
239 aa  213  1.9999999999999998e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  54.5 
 
 
219 aa  213  1.9999999999999998e-54  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  53.95 
 
 
220 aa  212  2.9999999999999995e-54  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  55.31 
 
 
232 aa  213  2.9999999999999995e-54  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  56.62 
 
 
221 aa  212  3.9999999999999995e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3028  two component transcriptional regulator, LuxR family  54.75 
 
 
225 aa  211  4.9999999999999996e-54  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.211566  decreased coverage  0.0000266978 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  55.05 
 
 
216 aa  211  7e-54  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  51.83 
 
 
218 aa  211  7e-54  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  52.78 
 
 
230 aa  211  7e-54  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.42 
 
 
229 aa  211  7e-54  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  54.88 
 
 
226 aa  211  1e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  52.75 
 
 
218 aa  210  1e-53  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  56.68 
 
 
302 aa  210  1e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  54.3 
 
 
234 aa  209  2e-53  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  55.09 
 
 
220 aa  209  3e-53  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  53.7 
 
 
221 aa  209  3e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  53.21 
 
 
224 aa  209  3e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  55.2 
 
 
230 aa  209  4e-53  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  52.31 
 
 
219 aa  208  5e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  54.88 
 
 
217 aa  208  5e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  53.49 
 
 
247 aa  208  6e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  55.2 
 
 
230 aa  207  8e-53  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  53.15 
 
 
228 aa  207  1e-52  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  54.59 
 
 
224 aa  207  1e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  54.05 
 
 
223 aa  206  2e-52  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  53.67 
 
 
221 aa  205  4e-52  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  53.81 
 
 
226 aa  205  4e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  56.76 
 
 
224 aa  205  4e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  51.54 
 
 
231 aa  205  4e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  50.9 
 
 
226 aa  205  5e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.93 
 
 
222 aa  205  5e-52  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  55.66 
 
 
224 aa  205  5e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  55.05 
 
 
217 aa  205  5e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  54.5 
 
 
226 aa  204  6e-52  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  48.9 
 
 
233 aa  204  7e-52  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  54.75 
 
 
225 aa  204  7e-52  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  52.02 
 
 
241 aa  204  7e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  53.02 
 
 
213 aa  204  9e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  53.36 
 
 
222 aa  204  9e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  52.73 
 
 
223 aa  204  1e-51  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  51.33 
 
 
228 aa  204  1e-51  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  53.85 
 
 
225 aa  203  1e-51  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_014151  Cfla_0857  two component transcriptional regulator, LuxR family  54.84 
 
 
219 aa  204  1e-51  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0762303  normal 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  52.73 
 
 
228 aa  203  1e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  54.63 
 
 
217 aa  204  1e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.49 
 
 
244 aa  203  2e-51  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  53.42 
 
 
219 aa  203  2e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  53.36 
 
 
230 aa  203  2e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  52.05 
 
 
220 aa  202  2e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  48.86 
 
 
233 aa  202  3e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  51.54 
 
 
230 aa  202  4e-51  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013131  Caci_6705  two component transcriptional regulator, LuxR family  48.41 
 
 
258 aa  201  6e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.318103  normal  0.0731204 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  52.99 
 
 
244 aa  201  7e-51  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  53 
 
 
219 aa  201  7e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  48.35 
 
 
250 aa  199  1.9999999999999998e-50  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  52.65 
 
 
225 aa  200  1.9999999999999998e-50  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  51.39 
 
 
215 aa  199  3e-50  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  51.12 
 
 
221 aa  199  3e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.33 
 
 
236 aa  199  3.9999999999999996e-50  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_009921  Franean1_6351  two component LuxR family transcriptional regulator  48.87 
 
 
244 aa  199  3.9999999999999996e-50  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  53 
 
 
220 aa  198  5e-50  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
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