More than 300 homologs were found in PanDaTox collection
for query gene Bfae_00360 on replicon NC_013172
Organism: Brachybacterium faecium DSM 4810



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013172  Bfae_00360  transcriptional regulator with HTH domain and aminotransferase domain  100 
 
 
455 aa  879    Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009425  Ent638_4213  GntR family transcriptional regulator  41.48 
 
 
432 aa  340  4e-92  Enterobacter sp. 638  Bacteria  normal  0.0990086  normal 
 
 
-
 
NC_011094  SeSA_A2672  GntR-family transcriptional regulator  44.07 
 
 
430 aa  335  1e-90  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.562569  normal 
 
 
-
 
NC_007974  Rmet_4117  transcriptional regulator with aminotransferase and DNA binding domains (possibly involved in vitB6 biosynthesis)  45.95 
 
 
431 aa  334  2e-90  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B2581  GntR-family transcriptional regulator  43.85 
 
 
430 aa  330  3e-89  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C2696  GntR family transcriptional regulator  43.62 
 
 
430 aa  330  4e-89  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A2802  GntR family transcriptional regulator  43.62 
 
 
430 aa  330  5.0000000000000004e-89  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A2630  GntR family transcriptional regulator  43.4 
 
 
430 aa  329  8e-89  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.0520726  normal 
 
 
-
 
NC_011071  Smal_2382  transcriptional regulator, GntR family with aminotransferase domain  46.77 
 
 
428 aa  325  1e-87  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.268016  normal 
 
 
-
 
NC_013947  Snas_4186  transcriptional regulator, GntR family with aminotransferase domain-containing protein  43.68 
 
 
436 aa  240  4e-62  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.710263  normal  0.0862967 
 
 
-
 
NC_014151  Cfla_1430  transcriptional regulator, GntR family with aminotransferase domain  39.77 
 
 
446 aa  206  8e-52  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0746057  normal 
 
 
-
 
NC_013131  Caci_1566  transcriptional regulator, GntR family with aminotransferase domain  40.85 
 
 
444 aa  204  3e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.487946 
 
 
-
 
NC_009832  Spro_2563  transcriptional regulator  35.11 
 
 
434 aa  201  1.9999999999999998e-50  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0018  transcriptional regulator, GntR family with aminotransferase domain  38.29 
 
 
442 aa  184  4.0000000000000006e-45  Acidovorax ebreus TPSY  Bacteria  normal  0.316764  n/a   
 
 
-
 
NC_008752  Aave_0017  GntR family transcriptional regulator  36.95 
 
 
442 aa  181  2e-44  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_24220  transcriptional regulator with HTH domain and aminotransferase domain  36.61 
 
 
448 aa  179  7e-44  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_4162  GntR family transcriptional regulator  38.07 
 
 
442 aa  179  1e-43  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_0837  transcriptional regulator, GntR family with aminotransferase domain  35.45 
 
 
462 aa  176  7e-43  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.439147  n/a   
 
 
-
 
NC_013124  Afer_0940  transcriptional regulator, GntR family with aminotransferase domain  36.63 
 
 
462 aa  158  2e-37  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0465159  n/a   
 
 
-
 
NC_010816  BLD_1418  putative transcriptional regulator  33.33 
 
 
532 aa  151  2e-35  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5410  transcriptional regulator, GntR family with aminotransferase domain  30.54 
 
 
441 aa  141  1.9999999999999998e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_0385  transcriptional regulator, GntR family with aminotransferase domain  29.84 
 
 
452 aa  141  3e-32  Dickeya dadantii Ech703  Bacteria  normal  0.577938  n/a   
 
 
-
 
NC_007951  Bxe_A1472  GntR family transcriptional regulator  29.19 
 
 
449 aa  130  6e-29  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.240551 
 
 
-
 
NC_011368  Rleg2_5225  transcriptional regulator, GntR family with aminotransferase domain  32.42 
 
 
441 aa  130  7.000000000000001e-29  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.260155 
 
 
-
 
NC_008254  Meso_0044  GntR family transcriptional regulator  30.96 
 
 
445 aa  122  9.999999999999999e-27  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2819  GntR family transcriptional regulator  30.91 
 
 
467 aa  117  6e-25  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_6053  transcriptional regulator, GntR family with aminotransferase domain  25.22 
 
 
472 aa  105  2e-21  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.137627  normal 
 
 
-
 
NC_003296  RS02394  putative transcription regulator protein  29.3 
 
 
471 aa  103  5e-21  Ralstonia solanacearum GMI1000  Bacteria  normal  0.38113  normal 
 
 
-
 
NC_007406  Nwi_0881  GntR family transcriptional regulator  30.09 
 
 
478 aa  102  1e-20  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.426216  normal 
 
 
-
 
NC_008686  Pden_1434  GntR family transcriptional regulator  34.52 
 
 
480 aa  100  6e-20  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.515471 
 
 
-
 
NC_014210  Ndas_0615  transcriptional regulator, GntR family with aminotransferase domain  34.62 
 
 
491 aa  100  7e-20  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.736452  normal 
 
 
-
 
NC_011898  Ccel_1857  transcriptional regulator, GntR family with aminotransferase domain  22.54 
 
 
468 aa  97.4  5e-19  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1101  GntR family transcriptional regulator  29.7 
 
 
464 aa  96.7  7e-19  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_3767  transcriptional regulator, GntR family/aminotransferase, class I protein  25.94 
 
 
477 aa  95.9  1e-18  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000429089 
 
 
-
 
NC_005945  BAS3600  GntR family transcriptional regulator  25.58 
 
 
477 aa  95.9  1e-18  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_3886  GntR family transcriptional regulator  25.58 
 
 
477 aa  95.9  1e-18  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3499  transcriptional regulator  25.79 
 
 
477 aa  95.5  2e-18  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.0033434  n/a   
 
 
-
 
NC_013037  Dfer_2235  transcriptional regulator, GntR family with aminotransferase domain  26.21 
 
 
473 aa  95.1  2e-18  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.71743 
 
 
-
 
NC_011658  BCAH187_A3799  transcriptional regulator, GntR family/aminotransferase, class I protein  25.58 
 
 
477 aa  95.1  2e-18  Bacillus cereus AH187  Bacteria  hitchhiker  0.00124231  n/a   
 
 
-
 
NC_008781  Pnap_2629  GntR family transcriptional regulator  27.35 
 
 
463 aa  95.5  2e-18  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4272  transcriptional regulator, GntR family with aminotransferase domain  28.73 
 
 
467 aa  94.7  3e-18  Ralstonia pickettii 12J  Bacteria  normal  0.200991  normal  0.884881 
 
 
-
 
NC_012857  Rpic12D_4382  transcriptional regulator, GntR family with aminotransferase domain protein  28.73 
 
 
467 aa  94.7  3e-18  Ralstonia pickettii 12D  Bacteria  normal  normal  0.340395 
 
 
-
 
NC_009049  Rsph17029_0573  GntR family transcriptional regulator  34.92 
 
 
470 aa  94.4  4e-18  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK3511  GntR family transcriptional regulator  25.58 
 
 
477 aa  94.4  4e-18  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_1922  GntR family transcriptional regulator  34.92 
 
 
470 aa  94.4  4e-18  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.664628  n/a   
 
 
-
 
NC_012792  Vapar_5644  transcriptional regulator, GntR family with aminotransferase domain  30.38 
 
 
481 aa  93.2  9e-18  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3799  transcriptional regulator, GntR family with aminotransferase domain  30.18 
 
 
504 aa  92.4  1e-17  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A3856  transcriptional regulator, GntR family/aminotransferase, class I protein  25.49 
 
 
477 aa  92.8  1e-17  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_4138  GntR family transcriptional regulator  23.18 
 
 
470 aa  92  2e-17  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_4954  GntR family transcriptional regulator  27.96 
 
 
466 aa  91.3  3e-17  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0539  transcriptional regulator  26.19 
 
 
462 aa  91.3  4e-17  Pseudomonas putida W619  Bacteria  normal  normal  0.0353345 
 
 
-
 
NC_007760  Adeh_2233  GntR family transcriptional regulator  34.72 
 
 
488 aa  89.7  1e-16  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.420665  n/a   
 
 
-
 
NC_013739  Cwoe_2490  transcriptional regulator, GntR family with aminotransferase domain  35.05 
 
 
471 aa  89.7  1e-16  Conexibacter woesei DSM 14684  Bacteria  normal  0.0316891  normal  0.100941 
 
 
-
 
NC_010184  BcerKBAB4_3526  transcriptional regulator  25.05 
 
 
477 aa  88.6  2e-16  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_3789  GntR family transcriptional regulator  25 
 
 
477 aa  89  2e-16  Bacillus cereus ATCC 10987  Bacteria  normal  0.0162684  n/a   
 
 
-
 
NC_011891  A2cp1_1714  transcriptional regulator, GntR family with aminotransferase domain  33.33 
 
 
488 aa  88.6  2e-16  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0550689  n/a   
 
 
-
 
NC_011772  BCG9842_B1442  transcriptional regulator, GntR family/aminotransferase, class I protein  27.85 
 
 
477 aa  89  2e-16  Bacillus cereus G9842  Bacteria  normal  0.057405  hitchhiker  0.00000201635 
 
 
-
 
NC_013947  Snas_1082  transcriptional regulator, GntR family with aminotransferase domain-containing protein  33.43 
 
 
457 aa  89  2e-16  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.029023  normal 
 
 
-
 
NC_011145  AnaeK_1641  transcriptional regulator, GntR family with aminotransferase domain  33.33 
 
 
488 aa  87.4  5e-16  Anaeromyxobacter sp. K  Bacteria  normal  0.119637  n/a   
 
 
-
 
NC_008463  PA14_10010  putative transcriptional regulator  31.31 
 
 
496 aa  87  6e-16  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.287288  normal 
 
 
-
 
NC_009719  Plav_2133  GntR family transcriptional regulator  27.93 
 
 
476 aa  85.9  0.000000000000001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_3519  transcriptional regulator, GntR family with aminotransferase domain  32.37 
 
 
471 aa  85.9  0.000000000000001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A1716  aminotransferase, classes I and II superfamily  29.63 
 
 
474 aa  85.5  0.000000000000002  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1356  GntR family transcriptional regulator  31.46 
 
 
477 aa  85.5  0.000000000000002  Burkholderia sp. 383  Bacteria  normal  normal  0.130979 
 
 
-
 
NC_009784  VIBHAR_06858  transcriptional regulator  28.12 
 
 
478 aa  85.1  0.000000000000002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007511  Bcep18194_B3074  GntR family transcriptional regulator  29.57 
 
 
470 aa  85.5  0.000000000000002  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_0621  GntR family transcriptional regulator  26.17 
 
 
547 aa  85.5  0.000000000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3668  transcriptional regulator, GntR family with aminotransferase domain protein  31.65 
 
 
472 aa  84.7  0.000000000000003  Pectobacterium wasabiae WPP163  Bacteria  normal  0.271515  n/a   
 
 
-
 
NC_011891  A2cp1_0059  transcriptional regulator, GntR family with aminotransferase domain  33.24 
 
 
487 aa  84.3  0.000000000000003  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.869186  n/a   
 
 
-
 
NC_008391  Bamb_3927  GntR family transcriptional regulator  30.75 
 
 
477 aa  84.7  0.000000000000003  Burkholderia ambifaria AMMD  Bacteria  normal  0.510298  normal 
 
 
-
 
NC_009436  Ent638_0497  GntR family transcriptional regulator  29.45 
 
 
463 aa  84.7  0.000000000000003  Enterobacter sp. 638  Bacteria  normal  normal  0.283703 
 
 
-
 
NC_014213  Mesil_3297  hypothetical protein  28.53 
 
 
493 aa  84.7  0.000000000000003  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0920316 
 
 
-
 
NC_010552  BamMC406_4391  transcriptional regulator  30.75 
 
 
477 aa  84  0.000000000000005  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.046272 
 
 
-
 
NC_013235  Namu_4809  transcriptional regulator, GntR family with aminotransferase domain  31.83 
 
 
508 aa  84  0.000000000000005  Nakamurella multipartita DSM 44233  Bacteria  normal  0.367164  normal 
 
 
-
 
NC_011205  SeD_A1743  aminotransferase  29.63 
 
 
474 aa  84  0.000000000000005  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.455944  normal 
 
 
-
 
NC_011149  SeAg_B1562  aminotransferase, classes I and II superfamily  29.63 
 
 
474 aa  84  0.000000000000005  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_0519  GntR family transcriptional regulator  24.78 
 
 
460 aa  84  0.000000000000005  Pseudomonas putida F1  Bacteria  normal  normal  0.481515 
 
 
-
 
NC_011083  SeHA_C1778  aminotransferase, classes I and II superfamily  29.63 
 
 
474 aa  84  0.000000000000005  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A1713  aminotransferase, classes I and II superfamily  29.63 
 
 
474 aa  84  0.000000000000005  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_0636  GntR family transcriptional regulator  27.14 
 
 
478 aa  84  0.000000000000006  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_5809  transcriptional regulator  32.09 
 
 
477 aa  83.6  0.000000000000006  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.231946  normal 
 
 
-
 
NC_011071  Smal_3796  transcriptional regulator, GntR family with aminotransferase domain  28.92 
 
 
471 aa  84  0.000000000000006  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.975014  normal 
 
 
-
 
NC_008025  Dgeo_1430  GntR family transcriptional regulator  33.54 
 
 
474 aa  83.6  0.000000000000007  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.149047 
 
 
-
 
NC_009436  Ent638_2129  GntR family transcriptional regulator  28.17 
 
 
469 aa  83.6  0.000000000000007  Enterobacter sp. 638  Bacteria  normal  0.98832  normal 
 
 
-
 
NC_013165  Shel_07570  transcriptional regulator with HTH domain and aminotransferase domain  27.66 
 
 
491 aa  83.2  0.000000000000008  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.716498  normal  0.392489 
 
 
-
 
NC_007413  Ava_1933  GntR family transcriptional regulator  27.36 
 
 
490 aa  83.2  0.000000000000008  Anabaena variabilis ATCC 29413  Bacteria  normal  0.100433  normal 
 
 
-
 
NC_013595  Sros_5231  putative transcriptional regulator, GntR family  33.02 
 
 
466 aa  82.8  0.00000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.203083 
 
 
-
 
NC_010002  Daci_3668  transcriptional regulator  28.76 
 
 
509 aa  82.4  0.00000000000001  Delftia acidovorans SPH-1  Bacteria  normal  0.22591  normal  0.0459269 
 
 
-
 
NC_007510  Bcep18194_A4479  GntR family transcriptional regulator  30.74 
 
 
477 aa  82.8  0.00000000000001  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A0345  transcriptional regulator, GntR family  26.62 
 
 
470 aa  82.8  0.00000000000001  Bacillus cereus AH187  Bacteria  normal  0.469578  n/a   
 
 
-
 
NC_008061  Bcen_3874  GntR family transcriptional regulator  32.09 
 
 
477 aa  82.8  0.00000000000001  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4495  GntR family transcriptional regulator  32.09 
 
 
477 aa  82.8  0.00000000000001  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_4240  transcriptional regulator, GntR family with aminotransferase domain  25.24 
 
 
517 aa  82.4  0.00000000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1143  GntR family transcriptional regulator  29.04 
 
 
496 aa  82  0.00000000000002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A4302  GntR family transcriptional regulator  27.66 
 
 
521 aa  82.4  0.00000000000002  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A3002  GntR family transcriptional regulator  26.94 
 
 
444 aa  82.4  0.00000000000002  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  hitchhiker  0.00227723 
 
 
-
 
NC_008262  CPR_1924  GntR family transcriptional regulator  20.9 
 
 
468 aa  82  0.00000000000002  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_2304  regulatory protein GntR, HTH  27.54 
 
 
475 aa  81.6  0.00000000000003  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3373  transcriptional regulator  22.93 
 
 
484 aa  81.3  0.00000000000003  Shewanella woodyi ATCC 51908  Bacteria  normal  0.98747  normal  0.499869 
 
 
-
 
NC_011094  SeSA_A2950  transcriptional regulator, GntR family with aminotransferase domain  26.94 
 
 
444 aa  80.9  0.00000000000004  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.130328  normal  0.0175968 
 
 
-
 
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