More than 300 homologs were found in PanDaTox collection
for query gene Bcen_5556 on replicon NC_008062
Organism: Burkholderia cenocepacia AU 1054



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010512  Bcenmc03_6428  binding-protein-dependent transport systems inner membrane component  99.38 
 
 
324 aa  653    Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008062  Bcen_5556  binding-protein-dependent transport systems inner membrane component  100 
 
 
324 aa  656    Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0488095  n/a   
 
 
-
 
NC_008544  Bcen2424_5921  binding-protein-dependent transport systems inner membrane component  100 
 
 
324 aa  656    Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_5226  binding-protein-dependent transport systems inner membrane component  84.64 
 
 
323 aa  568  1e-161  Burkholderia phytofirmans PsJN  Bacteria  normal  0.226274  normal 
 
 
-
 
NC_007952  Bxe_B1386  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  84.01 
 
 
323 aa  565  1e-160  Burkholderia xenovorans LB400  Bacteria  normal  0.173943  normal  0.101646 
 
 
-
 
NC_007947  Mfla_1858  binding-protein-dependent transport systems inner membrane component  66.77 
 
 
321 aa  444  1.0000000000000001e-124  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0080  binding-protein dependent transport system inner membrane protein  70.33 
 
 
318 aa  436  1e-121  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_3082  binding-protein-dependent transport systems inner membrane component  67.94 
 
 
319 aa  420  1e-116  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_3907  binding-protein-dependent transport systems inner membrane component  62.38 
 
 
357 aa  417  9.999999999999999e-116  Methylobacterium populi BJ001  Bacteria  normal  0.0334046  normal  0.137928 
 
 
-
 
NC_013422  Hneap_0791  binding-protein-dependent transport systems inner membrane component  62.78 
 
 
320 aa  415  9.999999999999999e-116  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_4024  binding-protein-dependent transport systems inner membrane component  64.24 
 
 
353 aa  414  1e-114  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3729  binding-protein-dependent transport systems inner membrane component  63.72 
 
 
353 aa  411  1e-114  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.19574 
 
 
-
 
NC_007520  Tcr_1787  binding-protein dependent transport system inner membrane protein  60.69 
 
 
326 aa  387  1e-106  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_0040  binding-protein-dependent transport systems inner membrane component  38.1 
 
 
259 aa  161  1e-38  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.832577  normal  0.34867 
 
 
-
 
NC_008786  Veis_3788  binding-protein-dependent transport systems inner membrane component  38.5 
 
 
276 aa  156  5.0000000000000005e-37  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.374556  normal 
 
 
-
 
NC_007947  Mfla_2559  binding-protein-dependent transport systems inner membrane component  36.44 
 
 
283 aa  150  3e-35  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_3642  binding-protein-dependent transport systems inner membrane component  37.83 
 
 
275 aa  149  7e-35  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.142025  normal 
 
 
-
 
NC_007492  Pfl01_4930  binding-protein dependent transport system inner membrane protein  34.32 
 
 
267 aa  147  2.0000000000000003e-34  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_0146  binding-protein-dependent transport systems inner membrane component  36.4 
 
 
296 aa  147  3e-34  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.159688 
 
 
-
 
NC_007644  Moth_0466  binding-protein dependent transport system inner membrane protein  40.98 
 
 
262 aa  147  3e-34  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_2858  binding-protein-dependent transport systems inner membrane component  43.41 
 
 
291 aa  145  1e-33  Cupriavidus metallidurans CH34  Bacteria  normal  0.582448  normal 
 
 
-
 
NC_008752  Aave_2968  binding-protein-dependent transport systems inner membrane component  36.32 
 
 
289 aa  145  1e-33  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0761961  normal 
 
 
-
 
NC_007347  Reut_A2719  binding-protein dependent transport system inner membrane protein  42.31 
 
 
284 aa  143  4e-33  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_2276  binding-protein-dependent transport systems inner membrane component  41.76 
 
 
257 aa  140  1.9999999999999998e-32  Methylobacterium sp. 4-46  Bacteria  normal  0.722283  normal  0.0991744 
 
 
-
 
NC_011884  Cyan7425_3255  binding-protein-dependent transport systems inner membrane component  34.8 
 
 
294 aa  138  1e-31  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.106321 
 
 
-
 
NC_007948  Bpro_1046  binding-protein-dependent transport systems inner membrane component  39.57 
 
 
282 aa  138  2e-31  Polaromonas sp. JS666  Bacteria  normal  0.12004  normal  0.278615 
 
 
-
 
NC_011894  Mnod_0326  binding-protein-dependent transport systems inner membrane component  39.56 
 
 
257 aa  136  5e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.369486  n/a   
 
 
-
 
NC_007348  Reut_B4887  binding-protein dependent transport system inner membrane protein  41.46 
 
 
296 aa  135  9.999999999999999e-31  Ralstonia eutropha JMP134  Bacteria  normal  0.0123695  n/a   
 
 
-
 
NC_013223  Dret_1646  binding-protein-dependent transport systems inner membrane component  37 
 
 
259 aa  132  9e-30  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0155  binding-protein-dependent transport systems inner membrane component  37.95 
 
 
292 aa  130  2.0000000000000002e-29  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2644  binding-protein-dependent transport systems inner membrane component  38.12 
 
 
282 aa  129  6e-29  Dickeya dadantii Ech703  Bacteria  normal  0.285231  n/a   
 
 
-
 
NC_011729  PCC7424_0058  binding-protein-dependent transport systems inner membrane component  31.7 
 
 
275 aa  125  1e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009667  Oant_1429  binding-protein-dependent transport systems inner membrane component  41.44 
 
 
257 aa  124  3e-27  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.214609  n/a   
 
 
-
 
NC_011368  Rleg2_5005  binding-protein-dependent transport systems inner membrane component  29.79 
 
 
267 aa  124  3e-27  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007516  Syncc9605_1078  ABC transporter, nitrate-like  30.18 
 
 
275 aa  121  1.9999999999999998e-26  Synechococcus sp. CC9605  Bacteria  normal  0.193306  normal 
 
 
-
 
NC_009485  BBta_6456  ABC transporter permease  41.21 
 
 
258 aa  121  1.9999999999999998e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.405099  normal 
 
 
-
 
NC_008835  BMA10229_2019  taurine ABC transporter, permease protein  34.39 
 
 
285 aa  117  1.9999999999999998e-25  Burkholderia mallei NCTC 10229  Bacteria  normal  0.484134  n/a   
 
 
-
 
NC_009075  BURPS668_A2220  taurine ABC transporter, permease protein  34.39 
 
 
283 aa  118  1.9999999999999998e-25  Burkholderia pseudomallei 668  Bacteria  normal  0.215273  n/a   
 
 
-
 
NC_009079  BMA10247_A0697  taurine ABC transporter, permease protein  34.39 
 
 
283 aa  117  1.9999999999999998e-25  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA1580  taurine ABC transporter, permease protein  33.77 
 
 
253 aa  117  3e-25  Burkholderia mallei ATCC 23344  Bacteria  normal  0.477521  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0620  permease component of taurine ABC transporter  33.77 
 
 
253 aa  117  3e-25  Burkholderia pseudomallei 1710b  Bacteria  decreased coverage  0.00192231  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2133  taurine ABC transporter, permease protein  34.39 
 
 
283 aa  117  3e-25  Burkholderia pseudomallei 1106a  Bacteria  normal  0.186654  n/a   
 
 
-
 
NC_007650  BTH_II0802  taurine ABC transporter, permease protein  32.89 
 
 
283 aa  114  2.0000000000000002e-24  Burkholderia thailandensis E264  Bacteria  normal  0.207449  n/a   
 
 
-
 
NC_009077  Mjls_0094  binding-protein-dependent transport systems inner membrane component  33.92 
 
 
286 aa  111  1.0000000000000001e-23  Mycobacterium sp. JLS  Bacteria  normal  normal  0.062918 
 
 
-
 
NC_008146  Mmcs_0104  binding-protein-dependent transport systems inner membrane component  33.92 
 
 
286 aa  111  2.0000000000000002e-23  Mycobacterium sp. MCS  Bacteria  normal  0.424876  n/a   
 
 
-
 
NC_008705  Mkms_0113  binding-protein-dependent transport systems inner membrane component  33.92 
 
 
286 aa  111  2.0000000000000002e-23  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0961261 
 
 
-
 
NC_007778  RPB_1488  binding-protein dependent transport system inner membrane protein  30.38 
 
 
280 aa  110  4.0000000000000004e-23  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.106569  normal  0.790334 
 
 
-
 
NC_010465  YPK_0260  taurine transporter subunit  32.3 
 
 
284 aa  107  2e-22  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3065  binding-protein-dependent transport systems inner membrane component  31.08 
 
 
280 aa  107  2e-22  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.228654 
 
 
-
 
NC_009708  YpsIP31758_3936  taurine transporter subunit  32.3 
 
 
284 aa  107  2e-22  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3693  taurine transporter subunit  32.3 
 
 
284 aa  107  2e-22  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0246  binding-protein-dependent transport systems inner membrane component  30 
 
 
279 aa  106  5e-22  Pseudomonas putida F1  Bacteria  normal  0.0570948  normal  0.0921514 
 
 
-
 
NC_010501  PputW619_4981  binding-protein-dependent transport systems inner membrane component  29.26 
 
 
279 aa  106  6e-22  Pseudomonas putida W619  Bacteria  normal  normal  0.588836 
 
 
-
 
NC_002947  PP_0231  binding-protein-dependent transport systems inner membrane component  30 
 
 
279 aa  105  8e-22  Pseudomonas putida KT2440  Bacteria  normal  0.33405  hitchhiker  0.000710194 
 
 
-
 
NC_012792  Vapar_5517  binding-protein-dependent transport systems inner membrane component  29.25 
 
 
256 aa  105  8e-22  Variovorax paradoxus S110  Bacteria  normal  0.16627  n/a   
 
 
-
 
NC_009832  Spro_4564  taurine transporter subunit  32.74 
 
 
279 aa  105  9e-22  Serratia proteamaculans 568  Bacteria  normal  normal  0.746145 
 
 
-
 
NC_008709  Ping_0049  ABC taurine transporter, binding protein inner membrane component  28.87 
 
 
330 aa  105  9e-22  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.0656508 
 
 
-
 
NC_008752  Aave_0047  binding-protein-dependent transport systems inner membrane component  31.42 
 
 
306 aa  105  1e-21  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4060  binding-protein dependent transport system inner membrane protein  27.71 
 
 
256 aa  104  2e-21  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0735  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  31.03 
 
 
273 aa  104  2e-21  Burkholderia xenovorans LB400  Bacteria  normal  0.714635  normal 
 
 
-
 
NC_004311  BRA1188  taurine ABC transporter, permease protein  29.33 
 
 
250 aa  102  9e-21  Brucella suis 1330  Bacteria  normal  0.0612406  n/a   
 
 
-
 
NC_007492  Pfl01_0254  binding-protein dependent transport system inner membrane protein  30.13 
 
 
279 aa  102  1e-20  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.57663 
 
 
-
 
NC_008060  Bcen_2269  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
321 aa  102  1e-20  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2884  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
269 aa  101  1e-20  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_2894  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
321 aa  102  1e-20  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.438311 
 
 
-
 
NC_011832  Mpal_1076  binding-protein-dependent transport systems inner membrane component  31.42 
 
 
269 aa  101  2e-20  Methanosphaerula palustris E1-9c  Archaea  normal  0.406887  normal  0.454808 
 
 
-
 
NC_007510  Bcep18194_A6225  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  31.11 
 
 
320 aa  101  2e-20  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_014150  Bmur_0403  binding-protein-dependent transport systems inner membrane component  27.88 
 
 
256 aa  101  2e-20  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_0761  binding-protein-dependent transport systems inner membrane component  29.79 
 
 
412 aa  101  2e-20  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0255  binding-protein-dependent transport systems inner membrane component  28.82 
 
 
279 aa  101  2e-20  Pseudomonas putida GB-1  Bacteria  normal  0.796344  normal 
 
 
-
 
NC_010084  Bmul_0421  binding-protein-dependent transport systems inner membrane component  31.11 
 
 
321 aa  100  3e-20  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.905374 
 
 
-
 
NC_007953  Bxe_C0085  taurine ABC transporter inner membrane protein  32 
 
 
283 aa  100  3e-20  Burkholderia xenovorans LB400  Bacteria  normal  0.664827  normal  0.135193 
 
 
-
 
NC_008786  Veis_1108  binding-protein-dependent transport systems inner membrane component  31.14 
 
 
255 aa  100  4e-20  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.135552 
 
 
-
 
NC_010725  Mpop_1211  binding-protein-dependent transport systems inner membrane component  27.98 
 
 
273 aa  99.8  5e-20  Methylobacterium populi BJ001  Bacteria  normal  0.132759  normal  0.452833 
 
 
-
 
NC_009636  Smed_1127  binding-protein-dependent transport systems inner membrane component  28.07 
 
 
267 aa  100  5e-20  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_0355  putative ABC aliphatic sulfonates transporter, permease subunit  32.5 
 
 
264 aa  99.4  7e-20  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_0423  binding-protein-dependent transport systems inner membrane component  32.5 
 
 
264 aa  99.4  7e-20  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5321  taurine ABC transporter, permease protein  28.69 
 
 
285 aa  99.4  8e-20  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_5087  binding-protein-dependent transport systems inner membrane component  29.6 
 
 
259 aa  99  9e-20  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4641  binding-protein-dependent transport systems inner membrane component  28.05 
 
 
277 aa  99  9e-20  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750363  n/a   
 
 
-
 
NC_009832  Spro_1736  binding-protein-dependent transport systems inner membrane component  31.93 
 
 
264 aa  98.6  1e-19  Serratia proteamaculans 568  Bacteria  normal  0.440066  normal  0.144233 
 
 
-
 
NC_012917  PC1_1402  binding-protein-dependent transport systems inner membrane component  32.31 
 
 
257 aa  99  1e-19  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_0840  taurine transporter subunit  29 
 
 
275 aa  98.6  1e-19  Enterobacter sp. 638  Bacteria  normal  normal  0.276647 
 
 
-
 
NC_007333  Tfu_1503  taurine ABC transporter, permease protein  33.48 
 
 
288 aa  98.2  2e-19  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_011887  Mnod_7932  binding-protein-dependent transport systems inner membrane component  27.31 
 
 
283 aa  98.2  2e-19  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A4207  ABC taurine transporter, inner membrane subunit  31.42 
 
 
289 aa  98.2  2e-19  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1261  binding-protein-dependent transport systems inner membrane component  26.75 
 
 
273 aa  97.8  2e-19  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.306936 
 
 
-
 
NC_013421  Pecwa_1800  binding-protein-dependent transport systems inner membrane component  32.75 
 
 
257 aa  97.8  2e-19  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_1422  binding-protein-dependent transport systems inner membrane component  26.75 
 
 
273 aa  97.8  2e-19  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0509  binding-protein-dependent transport systems inner membrane component  30.97 
 
 
289 aa  97.4  2e-19  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.085274 
 
 
-
 
NC_009436  Ent638_1453  alkanesulfonate transporter permease subunit  31.28 
 
 
263 aa  97.4  3e-19  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_4051  binding-protein-dependent transport systems inner membrane component  25.93 
 
 
273 aa  97.4  3e-19  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.395379 
 
 
-
 
NC_012560  Avin_21990  ABC transporter, inner membrane permease component  28.57 
 
 
273 aa  97.1  4e-19  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4844  binding-protein-dependent transport systems inner membrane component  27.35 
 
 
288 aa  96.7  4e-19  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6082  binding-protein-dependent transport systems inner membrane component  30.09 
 
 
296 aa  96.3  6e-19  Burkholderia phymatum STM815  Bacteria  normal  normal  0.201741 
 
 
-
 
NC_010511  M446_0464  binding-protein-dependent transport systems inner membrane component  28.08 
 
 
288 aa  96.3  6e-19  Methylobacterium sp. 4-46  Bacteria  normal  0.349721  hitchhiker  0.00645779 
 
 
-
 
NC_009668  Oant_3505  binding-protein-dependent transport systems inner membrane component  26.55 
 
 
275 aa  95.5  1e-18  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.197989  n/a   
 
 
-
 
NC_009620  Smed_4861  binding-protein-dependent transport systems inner membrane component  27.43 
 
 
275 aa  95.1  1e-18  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0877464 
 
 
-
 
NC_011769  DvMF_0521  binding-protein-dependent transport systems inner membrane component  28.44 
 
 
292 aa  95.5  1e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.367955 
 
 
-
 
NC_009635  Maeo_0992  binding-protein-dependent transport systems inner membrane component  29.44 
 
 
254 aa  95.1  1e-18  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
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