23 homologs were found in PanDaTox collection
for query gene Bcen_4852 on replicon NC_008061
Organism: Burkholderia cenocepacia AU 1054



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008061  Bcen_4852  type IV secretory pathway, VirB3-like  100 
 
 
112 aa  224  3e-58  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_3314  type IV secretory pathway, VirB3 family protein  99.06 
 
 
106 aa  210  3.9999999999999995e-54  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_4201  type IV secretory pathway VirB3 family protein  92.45 
 
 
106 aa  196  9e-50  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2656  putative type IV secretion system protein VirB3/TraD  74.04 
 
 
106 aa  158  2e-38  Burkholderia xenovorans LB400  Bacteria  normal  0.556613  normal 
 
 
-
 
NC_007953  Bxe_C0449  putative type IV secretion system protein VirB3/TraD  72.38 
 
 
110 aa  158  3e-38  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6505  type IV secretory pathway VirB3 family protein  69.37 
 
 
114 aa  157  6e-38  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1755  putative type IV secretion system protein VirB3/TraD  73.08 
 
 
106 aa  157  7e-38  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.958773 
 
 
-
 
NC_010681  Bphyt_0162  type IV secretory pathway VirB3 family protein  72.38 
 
 
110 aa  155  2e-37  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0067  type IV secretion system protein VirB3  46.08 
 
 
116 aa  91.3  4e-18  Brucella suis 1330  Bacteria  decreased coverage  0.00447561  n/a   
 
 
-
 
NC_009504  BOV_A0061  type IV secretion system protein VirB3  46.08 
 
 
128 aa  91.3  4e-18  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_010509  Mrad2831_6324  type IV secretory pathway VirB3 family protein  40.78 
 
 
113 aa  81.3  0.000000000000005  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    normal 
 
 
-
 
NC_010524  Lcho_0871  type IV secretory pathway VirB3 family protein  39.18 
 
 
110 aa  62.4  0.000000002  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010657  SbBS512_0037  triC protein  36.26 
 
 
915 aa  61.2  0.000000005  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_008790  CJJ81176_pTet0028  cmgB3/4  34.18 
 
 
922 aa  54.7  0.0000004  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_011092  SeSA_B0108  TriC protein  33.33 
 
 
916 aa  53.5  0.0000009  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_012040  Cla_a009  secretion/conjugal transfer ATPase VirB3/4  30.48 
 
 
924 aa  52.8  0.000001  Campylobacter lari RM2100  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_2442  type IV secretory pathway VirB3 family protein  34.48 
 
 
102 aa  51.2  0.000005  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.79385 
 
 
-
 
NC_009475  BBta_p0256  Type IV secretory pathway AvhB3 protein  27.72 
 
 
112 aa  44.7  0.0005  Bradyrhizobium sp. BTAi1  Bacteria  n/a    normal  0.990445 
 
 
-
 
NC_012912  Dd1591_1487  CagE TrbE VirB component of type IV transporter system  29.89 
 
 
915 aa  44.7  0.0005  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_1136  type IV secretory pathway VirB3 family protein  34 
 
 
116 aa  43.9  0.0008  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010627  Bphy_7535  type IV secretory pathway VirB3 family protein  29.76 
 
 
145 aa  42.4  0.002  Burkholderia phymatum STM815  Bacteria  normal  0.362734  normal  0.0511266 
 
 
-
 
NC_008242  Meso_4347  type IV secretory pathway, VirB3-like  26.73 
 
 
112 aa  41.2  0.005  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009432  Rsph17025_4377  type IV secretory pathway, VirB3 family protein  33.66 
 
 
109 aa  40.8  0.007  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
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