More than 300 homologs were found in PanDaTox collection
for query gene Bcen2424_5659 on replicon NC_008543
Organism: Burkholderia cenocepacia HI2424



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008543  Bcen2424_5659  binding-protein-dependent transport systems inner membrane component  100 
 
 
313 aa  622  1e-177  Burkholderia cenocepacia HI2424  Bacteria  normal  0.308138  normal  0.32687 
 
 
-
 
NC_008061  Bcen_5200  binding-protein-dependent transport systems inner membrane component  99.36 
 
 
313 aa  619  1e-176  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_4933  binding-protein-dependent transport systems inner membrane component  94.59 
 
 
314 aa  586  1e-166  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.103484 
 
 
-
 
NC_010515  Bcenmc03_4576  binding-protein-dependent transport systems inner membrane component  98.09 
 
 
314 aa  587  1e-166  Burkholderia cenocepacia MC0-3  Bacteria  normal  hitchhiker  0.00748515 
 
 
-
 
NC_010552  BamMC406_5488  binding-protein-dependent transport systems inner membrane component  93.42 
 
 
319 aa  580  1.0000000000000001e-165  Burkholderia ambifaria MC40-6  Bacteria  normal  0.80176  hitchhiker  0.000205378 
 
 
-
 
NC_010086  Bmul_3195  binding-protein-dependent transport systems inner membrane component  93.29 
 
 
312 aa  545  1e-154  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.142654 
 
 
-
 
NC_010622  Bphy_2350  binding-protein-dependent transport systems inner membrane component  82.41 
 
 
317 aa  516  1.0000000000000001e-145  Burkholderia phymatum STM815  Bacteria  normal  normal  0.143445 
 
 
-
 
NC_010676  Bphyt_4587  binding-protein-dependent transport systems inner membrane component  83.16 
 
 
325 aa  494  1e-139  Burkholderia phytofirmans PsJN  Bacteria  normal  0.351015  normal 
 
 
-
 
NC_010557  BamMC406_6025  binding-protein-dependent transport systems inner membrane component  68.69 
 
 
305 aa  414  1e-114  Burkholderia ambifaria MC40-6  Bacteria  normal  0.584937  normal 
 
 
-
 
NC_008392  Bamb_6325  binding-protein-dependent transport systems inner membrane component  75 
 
 
305 aa  413  1e-114  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_4879  binding-protein-dependent transport systems inner membrane component  73.01 
 
 
305 aa  409  1e-113  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.825826  n/a   
 
 
-
 
NC_008543  Bcen2424_3286  binding-protein-dependent transport systems inner membrane component  73.01 
 
 
305 aa  409  1e-113  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_2010  ABC transporter substrate binding inner membrane protein  58.22 
 
 
318 aa  367  1e-100  Psychromonas ingrahamii 37  Bacteria  normal  0.360583  normal 
 
 
-
 
NC_009654  Mmwyl1_2009  binding-protein-dependent transport systems inner membrane component  60.56 
 
 
291 aa  355  5e-97  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_5738  ABC transporter membrane spanning protein (sugar)  57.19 
 
 
302 aa  347  2e-94  Agrobacterium vitis S4  Bacteria  normal  0.0678785  n/a   
 
 
-
 
NC_009952  Dshi_1247  binding-protein-dependent transport systems inner membrane component  61.51 
 
 
308 aa  336  1.9999999999999998e-91  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.732084 
 
 
-
 
NC_007435  BURPS1710b_A1183  ABC transporter, permease protein  55.29 
 
 
307 aa  317  2e-85  Burkholderia pseudomallei 1710b  Bacteria  normal  0.101432  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2817  putative carbohydrate ABC transporter, permease protein  55.29 
 
 
307 aa  317  2e-85  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008043  TM1040_3484  binding-protein-dependent transport systems inner membrane component  60.15 
 
 
275 aa  310  2e-83  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3837  binding-protein-dependent transport systems inner membrane component  50.29 
 
 
350 aa  300  2e-80  Jannaschia sp. CCS1  Bacteria  normal  0.344745  normal 
 
 
-
 
NC_011369  Rleg2_2326  binding-protein-dependent transport systems inner membrane component  52.6 
 
 
294 aa  299  5e-80  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.180469  normal 
 
 
-
 
NC_012850  Rleg_2651  binding-protein-dependent transport systems inner membrane component  52.94 
 
 
294 aa  298  7e-80  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.493427  normal 
 
 
-
 
NC_011899  Hore_20510  binding-protein-dependent transport systems inner membrane component  41.96 
 
 
290 aa  221  9.999999999999999e-57  Halothermothrix orenii H 168  Bacteria  normal  0.0790749  n/a   
 
 
-
 
NC_009718  Fnod_0627  binding-protein-dependent transport systems inner membrane component  40.75 
 
 
294 aa  219  6e-56  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.0000000558297  n/a   
 
 
-
 
NC_012669  Bcav_0941  binding-protein-dependent transport systems inner membrane component  39.16 
 
 
313 aa  199  3.9999999999999996e-50  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.737632 
 
 
-
 
NC_014212  Mesil_2392  binding-protein-dependent transport systems inner membrane component  37.86 
 
 
318 aa  199  6e-50  Meiothermus silvanus DSM 9946  Bacteria  normal  0.488692  normal 
 
 
-
 
NC_011368  Rleg2_4663  binding-protein-dependent transport systems inner membrane component  36.01 
 
 
299 aa  191  2e-47  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.456499 
 
 
-
 
NC_012848  Rleg_4750  binding-protein-dependent transport systems inner membrane component  36.01 
 
 
299 aa  189  4e-47  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.62916  normal  0.701692 
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  39.24 
 
 
319 aa  188  9e-47  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  35.37 
 
 
306 aa  182  5.0000000000000004e-45  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  36.08 
 
 
307 aa  176  7e-43  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  36.08 
 
 
307 aa  176  7e-43  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_012034  Athe_0615  binding-protein-dependent transport systems inner membrane component  32.97 
 
 
296 aa  174  1.9999999999999998e-42  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  34.78 
 
 
306 aa  173  2.9999999999999996e-42  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3982  binding-protein-dependent transport systems inner membrane component  37.93 
 
 
316 aa  171  2e-41  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  35.11 
 
 
317 aa  170  3e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_1134  binding-protein-dependent transport systems inner membrane component  32.75 
 
 
300 aa  166  2.9999999999999998e-40  Clostridium cellulolyticum H10  Bacteria  normal  0.454536  n/a   
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  33.76 
 
 
318 aa  164  1.0000000000000001e-39  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_014158  Tpau_1000  binding-protein-dependent transport systems inner membrane component  35.03 
 
 
306 aa  164  1.0000000000000001e-39  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.0937011  n/a   
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  33.75 
 
 
320 aa  164  2.0000000000000002e-39  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  33.65 
 
 
318 aa  164  2.0000000000000002e-39  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_011898  Ccel_1026  binding-protein-dependent transport systems inner membrane component  30.85 
 
 
300 aa  164  2.0000000000000002e-39  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0038089  n/a   
 
 
-
 
NC_008010  Dgeo_2695  binding-protein-dependent transport systems inner membrane component  38.69 
 
 
309 aa  163  3e-39  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.179346  n/a   
 
 
-
 
NC_007413  Ava_0563  binding-protein dependent transport system inner membrane protein  36.55 
 
 
294 aa  160  2e-38  Anabaena variabilis ATCC 29413  Bacteria  normal  0.22835  normal  0.0558608 
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  34.34 
 
 
305 aa  160  2e-38  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_4319  binding-protein-dependent transport systems inner membrane component  35.38 
 
 
312 aa  159  8e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.778687  hitchhiker  0.00185272 
 
 
-
 
NC_010524  Lcho_3242  binding-protein-dependent transport systems inner membrane component  32.52 
 
 
317 aa  157  1e-37  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_1699  binding-protein-dependent transport systems inner membrane component  33.7 
 
 
315 aa  156  4e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.258357  normal 
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  34.43 
 
 
307 aa  155  6e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_009664  Krad_3468  binding-protein-dependent transport systems inner membrane component  31.46 
 
 
321 aa  155  9e-37  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  32.44 
 
 
309 aa  155  1e-36  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  32.54 
 
 
309 aa  154  2e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
309 aa  154  2e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009636  Smed_2314  binding-protein-dependent transport systems inner membrane component  34.15 
 
 
310 aa  154  2e-36  Sinorhizobium medicae WSM419  Bacteria  normal  0.498676  normal  0.350334 
 
 
-
 
NC_008541  Arth_2946  binding-protein-dependent transport systems inner membrane component  35.09 
 
 
316 aa  153  2.9999999999999998e-36  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  32.86 
 
 
288 aa  153  2.9999999999999998e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_012848  Rleg_4872  binding-protein-dependent transport systems inner membrane component  33.87 
 
 
310 aa  151  1e-35  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.181942  normal  0.51159 
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
306 aa  150  2e-35  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  30.14 
 
 
316 aa  150  2e-35  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3986  putative ABC transporter (permease protein)  34.87 
 
 
313 aa  150  2e-35  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_11550  carbohydrate ABC transporter membrane protein  34.59 
 
 
354 aa  150  3e-35  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal  0.0144146 
 
 
-
 
NC_013739  Cwoe_4882  binding-protein-dependent transport systems inner membrane component  35.19 
 
 
313 aa  149  5e-35  Conexibacter woesei DSM 14684  Bacteria  normal  0.115668  normal 
 
 
-
 
NC_011886  Achl_3074  binding-protein-dependent transport systems inner membrane component  30.48 
 
 
314 aa  149  5e-35  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_014165  Tbis_3250  binding-protein-dependent transporter inner membrane component  33.94 
 
 
310 aa  149  6e-35  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_12850  sn-glycerol-3-phosphate transport integral membrane protein ABC transporter ugpA  33.55 
 
 
303 aa  149  6e-35  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00000000170243  normal 
 
 
-
 
NC_014158  Tpau_3529  binding-protein-dependent transport systems inner membrane component  31.43 
 
 
311 aa  149  9e-35  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2949  binding-protein-dependent transport systems inner membrane component  35.08 
 
 
302 aa  149  9e-35  Sinorhizobium medicae WSM419  Bacteria  normal  0.261022  normal 
 
 
-
 
NC_012669  Bcav_0146  binding-protein-dependent transport systems inner membrane component  32.03 
 
 
292 aa  148  1.0000000000000001e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0896196  normal 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  34.05 
 
 
316 aa  148  1.0000000000000001e-34  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  29.14 
 
 
299 aa  147  2.0000000000000003e-34  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2587  binding-protein-dependent transport systems inner membrane component  32.18 
 
 
314 aa  147  2.0000000000000003e-34  Jannaschia sp. CCS1  Bacteria  decreased coverage  0.000137508  normal 
 
 
-
 
NC_013525  Tter_1290  binding-protein-dependent transport systems inner membrane component  34.07 
 
 
297 aa  147  2.0000000000000003e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  31.88 
 
 
321 aa  147  3e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_1307  binding-protein-dependent transport systems inner membrane component  32.32 
 
 
297 aa  147  3e-34  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_0945  binding-protein-dependent transport systems inner membrane component  38.26 
 
 
309 aa  147  3e-34  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_2895  binding-protein-dependent transport systems inner membrane component  32.54 
 
 
316 aa  145  8.000000000000001e-34  Roseiflexus sp. RS-1  Bacteria  normal  0.0497455  normal 
 
 
-
 
NC_011884  Cyan7425_0944  binding-protein-dependent transport systems inner membrane component  35.38 
 
 
290 aa  145  9e-34  Cyanothece sp. PCC 7425  Bacteria  normal  0.120711  normal  0.307929 
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
292 aa  145  9e-34  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_013202  Hmuk_0943  binding-protein-dependent transport systems inner membrane component  32.52 
 
 
312 aa  145  1e-33  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.301949 
 
 
-
 
NC_010003  Pmob_1923  binding-protein-dependent transport systems inner membrane component  32.24 
 
 
307 aa  145  1e-33  Petrotoga mobilis SJ95  Bacteria  normal  0.372981  n/a   
 
 
-
 
NC_010816  BLD_1304  MalF-type ABC sugar transport systems permease component  31.85 
 
 
334 aa  144  1e-33  Bifidobacterium longum DJO10A  Bacteria  decreased coverage  0.00913134  n/a   
 
 
-
 
NC_012669  Bcav_1529  binding-protein-dependent transport systems inner membrane component  31.49 
 
 
318 aa  145  1e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.165529  normal  0.149292 
 
 
-
 
NC_010483  TRQ2_0115  binding-protein-dependent transport systems inner membrane component  29.89 
 
 
300 aa  144  2e-33  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2718  binding-protein-dependent transport systems inner membrane component  32.54 
 
 
330 aa  144  2e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.21265 
 
 
-
 
NC_009486  Tpet_0117  binding-protein-dependent transport systems inner membrane component  29.89 
 
 
300 aa  144  2e-33  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  30.14 
 
 
313 aa  143  3e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_2071  binding-protein-dependent transport systems inner membrane component  32.28 
 
 
345 aa  143  3e-33  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.0000672298  normal 
 
 
-
 
NC_010002  Daci_5305  binding-protein-dependent transport systems inner membrane component  37.55 
 
 
298 aa  144  3e-33  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.688973 
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  30.34 
 
 
294 aa  144  3e-33  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_013172  Bfae_28370  carbohydrate ABC transporter membrane protein  31.14 
 
 
287 aa  143  4e-33  Brachybacterium faecium DSM 4810  Bacteria  normal  0.096742  n/a   
 
 
-
 
NC_013235  Namu_0185  binding-protein-dependent transport systems inner membrane component  31.49 
 
 
315 aa  142  6e-33  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2573  binding-protein-dependent transport systems inner membrane component  31.03 
 
 
309 aa  142  7e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  29.49 
 
 
321 aa  142  7e-33  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_0526  ABC-type sugar transport systems permease components-like  32.63 
 
 
293 aa  142  8e-33  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_1807  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
295 aa  142  8e-33  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_1867  binding-protein-dependent transport systems inner membrane component  32.24 
 
 
312 aa  141  9.999999999999999e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013171  Apre_0062  binding-protein-dependent transport systems inner membrane component  29.79 
 
 
285 aa  141  9.999999999999999e-33  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  29.39 
 
 
317 aa  141  9.999999999999999e-33  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_009523  RoseRS_4568  binding-protein-dependent transport systems inner membrane component  31.38 
 
 
352 aa  142  9.999999999999999e-33  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_1219  binding-protein-dependent transport systems inner membrane component  31.68 
 
 
297 aa  140  1.9999999999999998e-32  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
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