More than 300 homologs were found in PanDaTox collection
for query gene Bcav_3990 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  100 
 
 
317 aa  626  1e-178  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  45.55 
 
 
316 aa  249  5e-65  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3573  binding-protein-dependent transport systems inner membrane component  42.77 
 
 
353 aa  234  1.0000000000000001e-60  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.500594  normal 
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  41.5 
 
 
309 aa  228  1e-58  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  43.23 
 
 
317 aa  225  7e-58  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  40.88 
 
 
305 aa  224  2e-57  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  45.74 
 
 
316 aa  224  2e-57  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  42.91 
 
 
291 aa  224  2e-57  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  43.27 
 
 
317 aa  222  6e-57  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  40.27 
 
 
299 aa  222  8e-57  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  45.09 
 
 
287 aa  220  1.9999999999999999e-56  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  37.42 
 
 
321 aa  219  5e-56  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  40.44 
 
 
320 aa  219  5e-56  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_21160  carbohydrate ABC transporter membrane protein  44.73 
 
 
314 aa  218  1e-55  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.103465  normal  0.100515 
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  40.83 
 
 
288 aa  217  2e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  38.66 
 
 
309 aa  216  4e-55  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  38.08 
 
 
318 aa  216  5e-55  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  37.07 
 
 
300 aa  215  7e-55  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009523  RoseRS_2819  binding-protein-dependent transport systems inner membrane component  39.2 
 
 
315 aa  214  9.999999999999999e-55  Roseiflexus sp. RS-1  Bacteria  normal  0.0308401  normal 
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  42.76 
 
 
321 aa  214  9.999999999999999e-55  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  40.41 
 
 
313 aa  214  1.9999999999999998e-54  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  39.03 
 
 
321 aa  213  3.9999999999999995e-54  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3147  binding-protein-dependent transport systems inner membrane component  41.19 
 
 
319 aa  211  1e-53  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00382098  n/a   
 
 
-
 
NC_013205  Aaci_0914  binding-protein-dependent transport systems inner membrane component  42.48 
 
 
310 aa  211  1e-53  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  40.8 
 
 
307 aa  211  1e-53  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_009767  Rcas_2545  binding-protein-dependent transport systems inner membrane component  40.07 
 
 
316 aa  211  1e-53  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.637107  normal  0.115222 
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  43.68 
 
 
299 aa  211  1e-53  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  40.96 
 
 
307 aa  209  6e-53  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  40.67 
 
 
309 aa  209  6e-53  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  40.96 
 
 
307 aa  209  6e-53  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_013235  Namu_3848  binding-protein-dependent transport systems inner membrane component  40.82 
 
 
320 aa  208  1e-52  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0230008  normal  0.429544 
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  38.87 
 
 
318 aa  207  1e-52  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  39.62 
 
 
283 aa  207  2e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0513  binding-protein-dependent transport systems inner membrane component  42.37 
 
 
314 aa  206  3e-52  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3792  binding-protein-dependent transport systems inner membrane component  42.03 
 
 
285 aa  206  3e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.168129  normal 
 
 
-
 
NC_010577  XfasM23_1549  binding-protein-dependent transport systems inner membrane component  41.79 
 
 
293 aa  206  6e-52  Xylella fastidiosa M23  Bacteria  normal  0.563461  n/a   
 
 
-
 
NC_010571  Oter_1749  binding-protein-dependent transport systems inner membrane component  41.2 
 
 
307 aa  204  1e-51  Opitutus terrae PB90-1  Bacteria  normal  0.45981  normal 
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  38.44 
 
 
318 aa  204  1e-51  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  42.42 
 
 
305 aa  204  2e-51  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_010513  Xfasm12_1606  ABC transporter sugar permease  41.79 
 
 
293 aa  204  2e-51  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2532  binding-protein-dependent transport systems inner membrane component  40.38 
 
 
417 aa  203  3e-51  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.636087 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  37.05 
 
 
306 aa  202  4e-51  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_014212  Mesil_2055  binding-protein-dependent transport systems inner membrane component  40.4 
 
 
415 aa  201  1.9999999999999998e-50  Meiothermus silvanus DSM 9946  Bacteria  normal  0.33288  normal  0.443347 
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  35.84 
 
 
308 aa  200  1.9999999999999998e-50  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2919  binding-protein-dependent transport systems inner membrane component  42.97 
 
 
310 aa  200  3e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3328  binding-protein-dependent transport systems inner membrane component  39.14 
 
 
314 aa  200  3e-50  Arthrobacter sp. FB24  Bacteria  normal  0.0166533  n/a   
 
 
-
 
NC_009616  Tmel_1015  binding-protein-dependent transport systems inner membrane component  39.15 
 
 
292 aa  200  3e-50  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_1668  binding-protein-dependent transport systems inner membrane component  35.76 
 
 
310 aa  200  3e-50  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  39.58 
 
 
317 aa  199  3.9999999999999996e-50  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  39.16 
 
 
313 aa  199  5e-50  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  36.63 
 
 
314 aa  199  7e-50  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  34.29 
 
 
296 aa  198  7.999999999999999e-50  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1151  binding-protein-dependent transport systems inner membrane component  39.81 
 
 
314 aa  198  7.999999999999999e-50  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.59424  n/a   
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  40.86 
 
 
294 aa  198  1.0000000000000001e-49  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_011886  Achl_0498  binding-protein-dependent transport systems inner membrane component  38.54 
 
 
317 aa  197  2.0000000000000003e-49  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000449996 
 
 
-
 
NC_013521  Sked_03080  permease component of ABC-type sugar transporter  41.46 
 
 
322 aa  197  2.0000000000000003e-49  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal 
 
 
-
 
NC_004311  BRA1182  sugar ABC transporter, permease protein, putative  37.23 
 
 
319 aa  197  3e-49  Brucella suis 1330  Bacteria  normal  0.547049  n/a   
 
 
-
 
NC_013172  Bfae_29410  carbohydrate ABC transporter membrane protein  38.44 
 
 
322 aa  196  4.0000000000000005e-49  Brachybacterium faecium DSM 4810  Bacteria  normal  0.899558  n/a   
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  39.35 
 
 
311 aa  196  4.0000000000000005e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_010717  PXO_00881  ABC transporter sugar permease  39.93 
 
 
294 aa  196  4.0000000000000005e-49  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0244413  n/a   
 
 
-
 
NC_009504  BOV_A1085  putative sugar ABC transporter, permease protein  37.23 
 
 
319 aa  196  6e-49  Brucella ovis ATCC 25840  Bacteria  normal  0.589946  n/a   
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  37.79 
 
 
305 aa  195  7e-49  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_1297  binding-protein-dependent transport systems inner membrane component  41.94 
 
 
279 aa  195  7e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.983189  normal 
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  37.1 
 
 
316 aa  195  8.000000000000001e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3002  binding-protein-dependent transport systems inner membrane component  40.99 
 
 
320 aa  194  1e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_2587  binding-protein-dependent transport systems inner membrane component  37.06 
 
 
314 aa  194  2e-48  Jannaschia sp. CCS1  Bacteria  decreased coverage  0.000137508  normal 
 
 
-
 
NC_011071  Smal_2682  binding-protein-dependent transport systems inner membrane component  40.43 
 
 
293 aa  194  2e-48  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.990678  normal 
 
 
-
 
NC_009616  Tmel_1616  binding-protein-dependent transport systems inner membrane component  43.81 
 
 
429 aa  194  2e-48  Thermosipho melanesiensis BI429  Bacteria  normal  0.225919  n/a   
 
 
-
 
NC_011886  Achl_3130  binding-protein-dependent transport systems inner membrane component  38.82 
 
 
314 aa  193  3e-48  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.00699527 
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  34.19 
 
 
315 aa  193  4e-48  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_1752  binding-protein-dependent transport systems inner membrane component  37.13 
 
 
314 aa  192  7e-48  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000089983 
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  38.27 
 
 
292 aa  192  7e-48  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  37.07 
 
 
294 aa  190  2e-47  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  38.71 
 
 
300 aa  191  2e-47  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  33.56 
 
 
308 aa  191  2e-47  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_012669  Bcav_2817  binding-protein-dependent transport systems inner membrane component  38.64 
 
 
310 aa  190  2e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.822068  normal 
 
 
-
 
NC_012669  Bcav_1523  binding-protein-dependent transport systems inner membrane component  42.09 
 
 
321 aa  191  2e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_4872  binding-protein-dependent transport systems inner membrane component  37.16 
 
 
310 aa  190  2.9999999999999997e-47  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.181942  normal  0.51159 
 
 
-
 
NC_013526  Tter_2615  binding-protein-dependent transport systems inner membrane component  41.2 
 
 
307 aa  189  4e-47  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000296099  n/a   
 
 
-
 
NC_010483  TRQ2_0339  binding-protein-dependent transport systems inner membrane component  44.25 
 
 
420 aa  189  4e-47  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_3807  binding-protein-dependent transport systems inner membrane component  42.97 
 
 
316 aa  187  1e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.922708  normal  0.915782 
 
 
-
 
NC_013526  Tter_2506  binding-protein-dependent transport systems inner membrane component  40.88 
 
 
306 aa  188  1e-46  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000185658  n/a   
 
 
-
 
NC_009486  Tpet_0321  binding-protein-dependent transport systems inner membrane component  43.36 
 
 
420 aa  187  2e-46  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0792  binding-protein-dependent transport systems inner membrane component  38.78 
 
 
320 aa  187  2e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  hitchhiker  0.00615148 
 
 
-
 
NC_012669  Bcav_3898  binding-protein-dependent transport systems inner membrane component  36.89 
 
 
324 aa  187  2e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_15550  binding-protein-dependent transport systems inner membrane component  39.11 
 
 
294 aa  186  5e-46  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_0718  binding-protein-dependent transport systems inner membrane component  43.85 
 
 
319 aa  186  6e-46  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.491906  n/a   
 
 
-
 
NC_013526  Tter_2496  binding-protein-dependent transport systems inner membrane component  34.95 
 
 
311 aa  185  7e-46  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0563  binding-protein dependent transport system inner membrane protein  40.48 
 
 
294 aa  185  7e-46  Anabaena variabilis ATCC 29413  Bacteria  normal  0.22835  normal  0.0558608 
 
 
-
 
NC_014210  Ndas_0559  binding-protein-dependent transport systems inner membrane component  37.29 
 
 
305 aa  185  7e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3074  sugar ABC transporter permease protein  40 
 
 
307 aa  185  9e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.146884 
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  38.23 
 
 
300 aa  184  1.0000000000000001e-45  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0176  binding-protein dependent transport system inner membrane protein  35.94 
 
 
314 aa  185  1.0000000000000001e-45  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2535  binding-protein-dependent transport systems inner membrane component  38.57 
 
 
314 aa  184  1.0000000000000001e-45  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  38.89 
 
 
306 aa  184  1.0000000000000001e-45  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_0229  binding-protein-dependent transport systems inner membrane component  39.02 
 
 
312 aa  185  1.0000000000000001e-45  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.772545  normal  0.492978 
 
 
-
 
NC_013745  Htur_4489  binding-protein-dependent transport systems inner membrane component  36.23 
 
 
308 aa  184  1.0000000000000001e-45  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.283214  n/a   
 
 
-
 
NC_012850  Rleg_3429  binding-protein-dependent transport systems inner membrane component  36.07 
 
 
307 aa  184  2.0000000000000003e-45  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2143  binding-protein-dependent transport systems inner membrane component  36.33 
 
 
318 aa  184  2.0000000000000003e-45  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_0527  binding-protein-dependent transport systems inner membrane component  37.96 
 
 
296 aa  184  2.0000000000000003e-45  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000283647  n/a   
 
 
-
 
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