More than 300 homologs were found in PanDaTox collection
for query gene Bcav_3804 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012669  Bcav_3804  two component transcriptional regulator, LuxR family  100 
 
 
216 aa  405  1e-112  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.185264  normal 
 
 
-
 
NC_010717  PXO_04459  two-component system regulatory protein  56.74 
 
 
213 aa  220  2e-56  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1099  two component transcriptional regulator, LuxR family  56.54 
 
 
213 aa  218  5e-56  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  50.91 
 
 
222 aa  194  7e-49  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  50.68 
 
 
223 aa  192  2e-48  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0556432 
 
 
-
 
NC_008322  Shewmr7_1222  two component LuxR family transcriptional regulator  47.91 
 
 
225 aa  192  4e-48  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1152  two component LuxR family transcriptional regulator  47.91 
 
 
225 aa  191  1e-47  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_3055  response regulator receiver  46.73 
 
 
219 aa  188  7e-47  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1151  two component LuxR family transcriptional regulator  47.44 
 
 
225 aa  187  1e-46  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3070  two component transcriptional regulator, LuxR family  45.12 
 
 
216 aa  185  4e-46  Shewanella baltica OS223  Bacteria  decreased coverage  0.000689776  unclonable  2.83062e-12 
 
 
-
 
NC_009052  Sbal_1241  two component LuxR family transcriptional regulator  46.05 
 
 
216 aa  185  4e-46  Shewanella baltica OS155  Bacteria  decreased coverage  3.99601e-05  n/a   
 
 
-
 
NC_009997  Sbal195_1319  two component LuxR family transcriptional regulator  45.16 
 
 
216 aa  185  5e-46  Shewanella baltica OS195  Bacteria  normal  0.0542522  decreased coverage  0.000972679 
 
 
-
 
NC_009665  Shew185_1285  two component LuxR family transcriptional regulator  46.05 
 
 
216 aa  184  8e-46  Shewanella baltica OS185  Bacteria  decreased coverage  0.000337392  n/a   
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  50 
 
 
219 aa  184  1e-45  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  46.67 
 
 
219 aa  182  2e-45  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  51.16 
 
 
220 aa  183  2e-45  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  47.64 
 
 
216 aa  179  3e-44  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_013757  Gobs_4064  two component transcriptional regulator, LuxR family  52.83 
 
 
217 aa  178  5e-44  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  48.84 
 
 
221 aa  176  3e-43  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_014210  Ndas_4366  two component transcriptional regulator, LuxR family  49.07 
 
 
225 aa  174  9e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  49.77 
 
 
225 aa  174  1e-42  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  49.3 
 
 
217 aa  173  2e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_0214  two component LuxR family transcriptional regulator  40.74 
 
 
220 aa  173  2e-42  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  44.5 
 
 
220 aa  172  3e-42  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2171  two component LuxR family transcriptional regulator  45.58 
 
 
218 aa  171  9e-42  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0762379  n/a   
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  47.06 
 
 
225 aa  171  9e-42  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  44.02 
 
 
218 aa  171  1e-41  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  39.07 
 
 
216 aa  170  1e-41  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  50.89 
 
 
229 aa  169  2e-41  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  48.1 
 
 
217 aa  170  2e-41  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.482316 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  48.84 
 
 
221 aa  168  5e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  49.55 
 
 
230 aa  167  1e-40  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_011884  Cyan7425_3249  two component transcriptional regulator, LuxR family  44.93 
 
 
211 aa  167  1e-40  Cyanothece sp. PCC 7425  Bacteria  normal  0.414819  normal  0.558116 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  49.54 
 
 
225 aa  166  2e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  40.83 
 
 
224 aa  165  4e-40  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  47.51 
 
 
222 aa  166  4e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  50.46 
 
 
222 aa  165  4e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  46.95 
 
 
235 aa  165  4e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_013757  Gobs_1030  two component transcriptional regulator, LuxR family  48.36 
 
 
212 aa  165  5e-40  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  45.58 
 
 
224 aa  165  5e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_012669  Bcav_2710  two component transcriptional regulator, LuxR family  49.77 
 
 
230 aa  165  5e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.248821  normal  0.606697 
 
 
-
 
NC_013093  Amir_4433  two component transcriptional regulator, LuxR family  47.22 
 
 
215 aa  164  7e-40  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  47.56 
 
 
226 aa  164  8e-40  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  46.51 
 
 
224 aa  164  9e-40  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  42.66 
 
 
216 aa  163  1e-39  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  47 
 
 
224 aa  162  2e-39  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  49.54 
 
 
220 aa  163  2e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  48.15 
 
 
220 aa  163  2e-39  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  48.18 
 
 
226 aa  163  2e-39  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  47.44 
 
 
225 aa  162  3e-39  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  36.15 
 
 
216 aa  162  3e-39  Clostridium cellulolyticum H10  Bacteria  hitchhiker  5.48978e-06  n/a   
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  44.6 
 
 
211 aa  162  4e-39  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  48.23 
 
 
227 aa  162  4e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  46.79 
 
 
215 aa  162  4e-39  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  45.7 
 
 
230 aa  162  5e-39  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.74 
 
 
226 aa  161  5e-39  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  47.73 
 
 
221 aa  161  6e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  45.66 
 
 
220 aa  161  6e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  48.65 
 
 
230 aa  161  7e-39  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1815  two component LuxR family transcriptional regulator  42.92 
 
 
213 aa  161  8e-39  Burkholderia xenovorans LB400  Bacteria  normal  0.922696  normal  0.34679 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  44.91 
 
 
218 aa  160  1e-38  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  45.37 
 
 
222 aa  160  1e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  47.53 
 
 
215 aa  160  1e-38  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_009921  Franean1_0533  two component LuxR family transcriptional regulator  47.42 
 
 
219 aa  160  1e-38  Frankia sp. EAN1pec  Bacteria  normal  0.405575  normal 
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  45.16 
 
 
209 aa  160  1e-38  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_007412  Ava_C0116  two component LuxR family transcriptional regulator  41.12 
 
 
209 aa  160  1e-38  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  37.26 
 
 
208 aa  159  2e-38  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  43.46 
 
 
250 aa  159  2e-38  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  46.4 
 
 
225 aa  160  2e-38  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  44.95 
 
 
225 aa  159  2e-38  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000789071 
 
 
-
 
NC_009921  Franean1_2449  two component LuxR family transcriptional regulator  43.81 
 
 
211 aa  159  3e-38  Frankia sp. EAN1pec  Bacteria  normal  normal  0.265588 
 
 
-
 
NC_013595  Sros_4744  response regulator receiver protein  45.41 
 
 
209 aa  159  4e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  0.620464  normal  0.690137 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  45.12 
 
 
218 aa  159  4e-38  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013131  Caci_5202  two component transcriptional regulator, LuxR family  45.33 
 
 
225 aa  158  5e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.677169  normal  0.920773 
 
 
-
 
NC_013441  Gbro_3475  response regulator receiver  45.79 
 
 
228 aa  158  5e-38  Gordonia bronchialis DSM 43247  Bacteria  normal  0.849127  n/a   
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  47.25 
 
 
218 aa  158  5e-38  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013510  Tcur_2233  two component transcriptional regulator, LuxR family  47.62 
 
 
232 aa  158  5e-38  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00197033  n/a   
 
 
-
 
NC_013595  Sros_0277  response regulator receiver protein  44.86 
 
 
214 aa  158  6e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  45.37 
 
 
216 aa  158  7e-38  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  47.69 
 
 
225 aa  158  7e-38  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  38.97 
 
 
222 aa  158  7e-38  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  41.94 
 
 
215 aa  158  7e-38  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  47.51 
 
 
225 aa  158  7e-38  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  43.36 
 
 
234 aa  157  8e-38  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.336237 
 
 
-
 
NC_013947  Snas_3040  two component transcriptional regulator, LuxR family  44.24 
 
 
224 aa  157  8e-38  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0154763  normal 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  49.08 
 
 
220 aa  157  9e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  44.98 
 
 
242 aa  157  9e-38  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  1.13212e-10 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  43.42 
 
 
234 aa  157  1e-37  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.24 
 
 
229 aa  157  1e-37  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.3 
 
 
236 aa  157  1e-37  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  41.94 
 
 
215 aa  157  1e-37  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_0508  response regulator receiver protein  48.6 
 
 
212 aa  157  1e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  41.94 
 
 
215 aa  157  1e-37  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  41.94 
 
 
215 aa  157  1e-37  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  41.94 
 
 
215 aa  157  1e-37  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_014165  Tbis_0228  LuxR family two component transcriptional regulator  47.69 
 
 
206 aa  157  1e-37  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  41.94 
 
 
215 aa  157  1e-37  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  45.41 
 
 
221 aa  157  1e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  44.86 
 
 
218 aa  157  2e-37  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  41.47 
 
 
215 aa  156  2e-37  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
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