More than 300 homologs were found in PanDaTox collection
for query gene Bcav_1731 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  100 
 
 
224 aa  444  1.0000000000000001e-124  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  62.79 
 
 
217 aa  250  1e-65  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  58.41 
 
 
222 aa  241  5e-63  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  57.94 
 
 
224 aa  241  7e-63  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013131  Caci_3748  two component transcriptional regulator, LuxR family  59.35 
 
 
236 aa  239  4e-62  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  54.88 
 
 
225 aa  234  6e-61  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  62.84 
 
 
224 aa  233  1.0000000000000001e-60  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  58.41 
 
 
221 aa  233  2.0000000000000002e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  58.88 
 
 
222 aa  232  4.0000000000000004e-60  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  57.48 
 
 
221 aa  231  9e-60  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  58.33 
 
 
215 aa  229  2e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  58.41 
 
 
221 aa  227  9e-59  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  56.48 
 
 
222 aa  226  2e-58  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  56.31 
 
 
232 aa  224  7e-58  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  55.71 
 
 
223 aa  221  4.9999999999999996e-57  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000386408  hitchhiker  0.000570848 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  55.61 
 
 
219 aa  221  4.9999999999999996e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  54.79 
 
 
223 aa  220  9.999999999999999e-57  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  55.4 
 
 
247 aa  219  1.9999999999999999e-56  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  52.31 
 
 
228 aa  219  3e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  55.81 
 
 
218 aa  218  3.9999999999999997e-56  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_009921  Franean1_6511  two component LuxR family transcriptional regulator  57.67 
 
 
215 aa  218  6e-56  Frankia sp. EAN1pec  Bacteria  normal  normal  0.100644 
 
 
-
 
NC_013093  Amir_4511  two component transcriptional regulator, LuxR family  54.42 
 
 
226 aa  218  7.999999999999999e-56  Actinosynnema mirum DSM 43827  Bacteria  normal  0.11054  n/a   
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  51.6 
 
 
261 aa  217  8.999999999999998e-56  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  56.42 
 
 
226 aa  217  1e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  54.25 
 
 
221 aa  217  1e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  53.02 
 
 
225 aa  217  1e-55  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  52.51 
 
 
226 aa  216  2.9999999999999998e-55  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_007777  Francci3_0303  two component LuxR family transcriptional regulator  58.88 
 
 
214 aa  215  4e-55  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  56.42 
 
 
222 aa  214  7e-55  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.811978 
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  56.36 
 
 
224 aa  213  1.9999999999999998e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  56.11 
 
 
230 aa  212  2.9999999999999995e-54  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  53.49 
 
 
220 aa  211  5.999999999999999e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  55.45 
 
 
226 aa  211  7.999999999999999e-54  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  52.78 
 
 
241 aa  211  9e-54  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  53.99 
 
 
239 aa  210  1e-53  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  53.3 
 
 
234 aa  211  1e-53  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  52.36 
 
 
219 aa  209  3e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  53.74 
 
 
244 aa  209  4e-53  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  50 
 
 
228 aa  208  5e-53  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  55.35 
 
 
217 aa  208  5e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  50 
 
 
218 aa  207  1e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_009921  Franean1_3727  two component LuxR family transcriptional regulator  54.79 
 
 
226 aa  206  2e-52  Frankia sp. EAN1pec  Bacteria  normal  normal  0.554715 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  50.91 
 
 
228 aa  206  2e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  53.92 
 
 
217 aa  206  2e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  50.88 
 
 
229 aa  205  4e-52  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  53.49 
 
 
226 aa  205  5e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  51.6 
 
 
226 aa  204  7e-52  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  52.05 
 
 
227 aa  203  2e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  54.21 
 
 
219 aa  203  2e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  51.8 
 
 
225 aa  202  3e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  51.85 
 
 
220 aa  202  3e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  48.42 
 
 
223 aa  201  5e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013947  Snas_5265  two component transcriptional regulator, LuxR family  52.8 
 
 
218 aa  201  7e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  50.23 
 
 
239 aa  201  8e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  53.02 
 
 
230 aa  201  9e-51  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  53 
 
 
230 aa  201  9e-51  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  56.28 
 
 
302 aa  200  9.999999999999999e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  51.54 
 
 
227 aa  199  1.9999999999999998e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  51.4 
 
 
224 aa  200  1.9999999999999998e-50  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  50.69 
 
 
219 aa  199  1.9999999999999998e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  50 
 
 
224 aa  199  3e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  49.77 
 
 
221 aa  199  3e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  51.4 
 
 
219 aa  199  3e-50  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  50.94 
 
 
225 aa  199  3e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  52.78 
 
 
220 aa  199  3.9999999999999996e-50  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  48.13 
 
 
233 aa  199  3.9999999999999996e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  53 
 
 
225 aa  198  6e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  51.39 
 
 
220 aa  198  6e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  48.13 
 
 
221 aa  198  6e-50  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  49.76 
 
 
225 aa  198  7e-50  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  50.68 
 
 
223 aa  197  7e-50  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  51.87 
 
 
225 aa  198  7e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.61 
 
 
225 aa  197  9e-50  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  52.8 
 
 
220 aa  197  1.0000000000000001e-49  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  50.94 
 
 
220 aa  196  2.0000000000000003e-49  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  44.86 
 
 
248 aa  196  2.0000000000000003e-49  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  51.61 
 
 
215 aa  196  3e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013947  Snas_1509  two component transcriptional regulator, LuxR family  51.14 
 
 
221 aa  196  3e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.198395  normal  0.0597777 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  49.56 
 
 
231 aa  195  5.000000000000001e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  49.12 
 
 
228 aa  194  7e-49  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0404  two component transcriptional regulator, LuxR family  48.84 
 
 
218 aa  194  1e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0987348  normal 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  51.16 
 
 
218 aa  193  2e-48  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.18 
 
 
226 aa  192  3e-48  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  50.46 
 
 
214 aa  192  3e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013131  Caci_6705  two component transcriptional regulator, LuxR family  45.34 
 
 
258 aa  192  3e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.318103  normal  0.0731204 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  48.87 
 
 
225 aa  192  4e-48  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  48.87 
 
 
241 aa  192  4e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013235  Namu_0651  two component transcriptional regulator, LuxR family  48.66 
 
 
241 aa  191  5e-48  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  49.11 
 
 
225 aa  191  6e-48  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  51.89 
 
 
226 aa  191  6e-48  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013521  Sked_19740  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.15 
 
 
216 aa  191  6e-48  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.682926  normal 
 
 
-
 
NC_013739  Cwoe_0676  two component transcriptional regulator, LuxR family  48.13 
 
 
215 aa  191  8e-48  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  51.14 
 
 
220 aa  190  1e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  50.69 
 
 
215 aa  190  2e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  48.6 
 
 
230 aa  189  2e-47  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  49.1 
 
 
234 aa  189  2e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  49.52 
 
 
211 aa  189  4e-47  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  50.69 
 
 
224 aa  189  4e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  50.23 
 
 
222 aa  188  5.999999999999999e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  48.85 
 
 
224 aa  188  7e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
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