More than 300 homologs were found in PanDaTox collection
for query gene Bcav_0717 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012669  Bcav_0717  two component transcriptional regulator, LuxR family  100 
 
 
209 aa  396  9.999999999999999e-111  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.854815  normal  0.189113 
 
 
-
 
NC_013595  Sros_0074  response regulator receiver protein  62.38 
 
 
207 aa  238  4e-62  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2579  two component transcriptional regulator, LuxR family  60.29 
 
 
213 aa  233  2.0000000000000002e-60  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0500394 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  58.57 
 
 
222 aa  221  4.9999999999999996e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0615  two component transcriptional regulator, LuxR family  60.66 
 
 
216 aa  207  1e-52  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  57.21 
 
 
210 aa  207  1e-52  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_012669  Bcav_3541  two component transcriptional regulator, LuxR family  56.04 
 
 
211 aa  206  2e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.485125  normal  0.513005 
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  53.62 
 
 
212 aa  203  1e-51  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_4922  two component transcriptional regulator, LuxR family  55.56 
 
 
206 aa  202  2e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0302523  normal 
 
 
-
 
NC_013595  Sros_0827  response regulator receiver protein  53.62 
 
 
217 aa  199  3e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_1051  two component transcriptional regulator, LuxR family  50.24 
 
 
211 aa  193  1e-48  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0337978 
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  52.17 
 
 
209 aa  193  2e-48  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_1030  two component transcriptional regulator, LuxR family  57.62 
 
 
212 aa  192  2e-48  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0277  response regulator receiver protein  53.62 
 
 
214 aa  190  1e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  51.21 
 
 
207 aa  183  1.0000000000000001e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.966789 
 
 
-
 
NC_013093  Amir_0513  two component transcriptional regulator, LuxR family  57 
 
 
209 aa  179  2e-44  Actinosynnema mirum DSM 43827  Bacteria  normal  0.52986  n/a   
 
 
-
 
NC_013595  Sros_4744  response regulator receiver protein  51.21 
 
 
209 aa  178  4.999999999999999e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.620464  normal  0.690137 
 
 
-
 
NC_013530  Xcel_0606  two component transcriptional regulator, LuxR family  51.69 
 
 
212 aa  177  1e-43  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2683  two component transcriptional regulator, LuxR family  50 
 
 
209 aa  174  6e-43  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7346  two component transcriptional regulator, LuxR family  52.88 
 
 
211 aa  174  8e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0451998 
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  43.96 
 
 
207 aa  172  1.9999999999999998e-42  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6980  two component transcriptional regulator, LuxR family  48.8 
 
 
213 aa  172  2.9999999999999996e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.999676 
 
 
-
 
NC_013595  Sros_1936  response regulator receiver protein  51.2 
 
 
205 aa  171  5e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_4606  two component transcriptional regulator, LuxR family  47.12 
 
 
207 aa  170  2e-41  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.296562 
 
 
-
 
NC_013595  Sros_0928  response regulator receiver protein  48.56 
 
 
207 aa  169  2e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0707495  normal 
 
 
-
 
NC_013441  Gbro_2881  response regulator receiver  46.7 
 
 
220 aa  165  5e-40  Gordonia bronchialis DSM 43247  Bacteria  decreased coverage  0.00126066  n/a   
 
 
-
 
NC_013521  Sked_29940  two component transcriptional regulator, LuxR family  48.08 
 
 
234 aa  164  1.0000000000000001e-39  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.683883 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  45.45 
 
 
228 aa  163  2.0000000000000002e-39  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3811  two component transcriptional regulator, LuxR family  48.33 
 
 
206 aa  162  5.0000000000000005e-39  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  hitchhiker  0.00252848 
 
 
-
 
NC_011886  Achl_0642  two component transcriptional regulator, LuxR family  46.11 
 
 
208 aa  158  5e-38  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  44.55 
 
 
214 aa  158  7e-38  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  42.25 
 
 
218 aa  157  1e-37  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_008726  Mvan_5474  two component LuxR family transcriptional regulator  44.29 
 
 
212 aa  156  2e-37  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.344108  normal  0.73382 
 
 
-
 
NC_012803  Mlut_18530  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.17 
 
 
209 aa  156  2e-37  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_4528  response regulator receiver  44.81 
 
 
213 aa  155  5.0000000000000005e-37  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  43.06 
 
 
213 aa  154  1e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal 
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  40.09 
 
 
236 aa  154  1e-36  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_009921  Franean1_4062  two component LuxR family transcriptional regulator  43.5 
 
 
216 aa  154  1e-36  Frankia sp. EAN1pec  Bacteria  normal  0.0448793  normal  0.300284 
 
 
-
 
NC_009921  Franean1_6933  two component LuxR family transcriptional regulator  43.5 
 
 
244 aa  153  2e-36  Frankia sp. EAN1pec  Bacteria  normal  normal  0.322421 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  44.19 
 
 
218 aa  152  2.9999999999999998e-36  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  44.86 
 
 
225 aa  152  4e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  48.11 
 
 
215 aa  152  4e-36  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0919  two component LuxR family transcriptional regulator  35.85 
 
 
214 aa  151  5e-36  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_1936  regulatory protein LuxR  44.08 
 
 
218 aa  152  5e-36  Gordonia bronchialis DSM 43247  Bacteria  normal  0.548655  n/a   
 
 
-
 
NC_010571  Oter_2926  two component LuxR family transcriptional regulator  42.79 
 
 
223 aa  151  7e-36  Opitutus terrae PB90-1  Bacteria  normal  0.380263  normal 
 
 
-
 
NC_011886  Achl_3380  two component transcriptional regulator, LuxR family  47.62 
 
 
222 aa  151  7e-36  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009719  Plav_1134  two component LuxR family transcriptional regulator  40 
 
 
213 aa  151  7e-36  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_4227  two component LuxR family transcriptional regulator  44.02 
 
 
213 aa  151  8e-36  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.624898 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  41.71 
 
 
217 aa  150  1e-35  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_013595  Sros_0508  response regulator receiver protein  44.76 
 
 
212 aa  150  1e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  38.14 
 
 
215 aa  150  1e-35  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  43.61 
 
 
228 aa  150  1e-35  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_5018  two component transcriptional regulator, LuxR family  45.69 
 
 
209 aa  150  1e-35  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  39.62 
 
 
224 aa  149  2e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013172  Bfae_00310  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.41 
 
 
213 aa  150  2e-35  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  38.14 
 
 
215 aa  150  2e-35  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  42.93 
 
 
217 aa  149  2e-35  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4064  two component transcriptional regulator, LuxR family  44.88 
 
 
217 aa  150  2e-35  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1102  LuxR family DNA-binding response regulator  34.91 
 
 
214 aa  149  3e-35  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0485  two component LuxR family transcriptional regulator  45.83 
 
 
208 aa  149  3e-35  Arthrobacter sp. FB24  Bacteria  normal  0.0855535  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  43.44 
 
 
227 aa  149  3e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013093  Amir_4433  two component transcriptional regulator, LuxR family  45.02 
 
 
215 aa  149  3e-35  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_3475  response regulator receiver  44.08 
 
 
228 aa  148  6e-35  Gordonia bronchialis DSM 43247  Bacteria  normal  0.849127  n/a   
 
 
-
 
NC_012853  Rleg_5633  two component transcriptional regulator, LuxR family  39.51 
 
 
203 aa  148  7e-35  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.603295  normal 
 
 
-
 
NC_009620  Smed_4344  two component LuxR family transcriptional regulator  39.11 
 
 
219 aa  148  7e-35  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.218307 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  38.14 
 
 
215 aa  147  8e-35  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  38.6 
 
 
215 aa  147  8e-35  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  39.61 
 
 
213 aa  147  8e-35  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_5522  two component LuxR family transcriptional regulator  46.15 
 
 
219 aa  147  8e-35  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_2293  LuxR family DNA-binding response regulator  37.44 
 
 
211 aa  147  1.0000000000000001e-34  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  45.45 
 
 
235 aa  147  1.0000000000000001e-34  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_012669  Bcav_2482  two component transcriptional regulator, LuxR family  49.76 
 
 
208 aa  147  1.0000000000000001e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0211915  normal  0.642006 
 
 
-
 
NC_013124  Afer_1981  two component transcriptional regulator, LuxR family  48.33 
 
 
222 aa  146  2.0000000000000003e-34  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_19700  two component transcriptional regulator, LuxR family  35.75 
 
 
209 aa  146  2.0000000000000003e-34  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  38.14 
 
 
215 aa  147  2.0000000000000003e-34  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  38.14 
 
 
215 aa  146  2.0000000000000003e-34  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  38.14 
 
 
215 aa  146  2.0000000000000003e-34  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  38.14 
 
 
215 aa  146  2.0000000000000003e-34  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  38.14 
 
 
215 aa  146  2.0000000000000003e-34  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5322  two component LuxR family transcriptional regulator  43.94 
 
 
220 aa  146  2.0000000000000003e-34  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.929677 
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  41.71 
 
 
221 aa  147  2.0000000000000003e-34  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  38.14 
 
 
215 aa  146  2.0000000000000003e-34  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  42.27 
 
 
226 aa  145  3e-34  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013169  Ksed_04030  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.51 
 
 
223 aa  146  3e-34  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.253855  normal  0.0592312 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  42.99 
 
 
225 aa  146  3e-34  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  39.17 
 
 
221 aa  146  3e-34  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  37.91 
 
 
222 aa  146  3e-34  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0228  LuxR family two component transcriptional regulator  43.48 
 
 
206 aa  145  3e-34  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1446  response regulator receiver protein  44.23 
 
 
209 aa  146  3e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0167897  normal  0.0778626 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  47.22 
 
 
221 aa  145  4.0000000000000006e-34  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_008699  Noca_2635  response regulator receiver  43.2 
 
 
207 aa  145  6e-34  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  38.43 
 
 
250 aa  144  8.000000000000001e-34  Frankia sp. EAN1pec  Bacteria  normal  normal  0.631776 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  45.83 
 
 
220 aa  144  8.000000000000001e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_008541  Arth_4147  two component LuxR family transcriptional regulator  47.12 
 
 
218 aa  144  9e-34  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2943  two component LuxR family transcriptional regulator  43 
 
 
215 aa  144  9e-34  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  40.19 
 
 
219 aa  144  1e-33  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  41.43 
 
 
219 aa  144  1e-33  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_1902  two component LuxR family transcriptional regulator  34.62 
 
 
207 aa  144  1e-33  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00000041006  n/a   
 
 
-
 
NC_009632  SaurJH1_1936  response regulator receiver  34.62 
 
 
207 aa  144  1e-33  Staphylococcus aureus subsp. aureus JH1  Bacteria  unclonable  0.000000150819  n/a   
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  33.65 
 
 
213 aa  144  1e-33  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
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