More than 300 homologs were found in PanDaTox collection
for query gene Bcav_0588 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012669  Bcav_0588  two component transcriptional regulator, LuxR family  100 
 
 
204 aa  391  1e-108  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_009921  Franean1_0528  two component LuxR family transcriptional regulator  59 
 
 
201 aa  206  2e-52  Frankia sp. EAN1pec  Bacteria  normal  0.653057  normal 
 
 
-
 
NC_012669  Bcav_1588  two component transcriptional regulator, LuxR family  56 
 
 
201 aa  198  3.9999999999999996e-50  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.117504  normal 
 
 
-
 
NC_013521  Sked_03860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  54.41 
 
 
204 aa  197  1.0000000000000001e-49  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0649288  normal  0.281143 
 
 
-
 
NC_013235  Namu_3006  two component transcriptional regulator, LuxR family  52.45 
 
 
204 aa  193  1e-48  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000248543  hitchhiker  0.000146029 
 
 
-
 
NC_014210  Ndas_1808  two component transcriptional regulator, LuxR family  54.27 
 
 
201 aa  186  2e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.207018 
 
 
-
 
NC_013510  Tcur_1624  two component transcriptional regulator, LuxR family  55 
 
 
201 aa  185  4e-46  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0305603  n/a   
 
 
-
 
NC_013595  Sros_6441  response regulator receiver protein  51.5 
 
 
227 aa  185  4e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.176234  normal  0.0893652 
 
 
-
 
NC_013757  Gobs_4836  two component transcriptional regulator, LuxR family  56 
 
 
201 aa  183  1.0000000000000001e-45  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.16538  n/a   
 
 
-
 
NC_014158  Tpau_3534  two component transcriptional regulator, LuxR family  50.24 
 
 
206 aa  177  7e-44  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_5200  two component transcriptional regulator, LuxR family  49.5 
 
 
223 aa  176  2e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0156716  normal  0.415255 
 
 
-
 
NC_013739  Cwoe_4753  two component transcriptional regulator, LuxR family  50.5 
 
 
201 aa  175  4e-43  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.226774 
 
 
-
 
NC_013739  Cwoe_5628  two component transcriptional regulator, LuxR family  51.98 
 
 
200 aa  174  9.999999999999999e-43  Conexibacter woesei DSM 14684  Bacteria  normal  0.946433  normal  0.876589 
 
 
-
 
NC_013521  Sked_06600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51 
 
 
200 aa  173  1.9999999999999998e-42  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.680692  normal 
 
 
-
 
NC_013595  Sros_8146  response regulator receiver protein  50.75 
 
 
202 aa  172  2.9999999999999996e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.524184 
 
 
-
 
NC_012803  Mlut_16250  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.25 
 
 
224 aa  172  2.9999999999999996e-42  Micrococcus luteus NCTC 2665  Bacteria  normal  0.216822  n/a   
 
 
-
 
NC_013159  Svir_11510  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  48.53 
 
 
203 aa  170  2e-41  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.575058  normal 
 
 
-
 
NC_007333  Tfu_0288  LuxR response regulator receiver  46.5 
 
 
201 aa  169  3e-41  Thermobifida fusca YX  Bacteria  normal  0.0935286  n/a   
 
 
-
 
NC_014165  Tbis_1720  LuxR family two component transcriptional regulator  50.5 
 
 
201 aa  169  4e-41  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0907  LuxR family two component transcriptional regulator  48.76 
 
 
197 aa  168  5e-41  Thermobispora bispora DSM 43833  Bacteria  normal  0.365102  normal 
 
 
-
 
NC_013947  Snas_0503  two component transcriptional regulator, LuxR family  49.5 
 
 
202 aa  166  2.9999999999999998e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.900292 
 
 
-
 
NC_008578  Acel_0195  two component LuxR family transcriptional regulator  53.5 
 
 
205 aa  166  2.9999999999999998e-40  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.116105 
 
 
-
 
NC_013595  Sros_1680  response regulator receiver protein  47.5 
 
 
197 aa  165  5e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.516841 
 
 
-
 
NC_013595  Sros_0091  response regulator receiver protein  48.26 
 
 
204 aa  165  5e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  0.520551  normal 
 
 
-
 
NC_013595  Sros_4055  response regulator receiver protein  47.5 
 
 
201 aa  163  2.0000000000000002e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0367887 
 
 
-
 
NC_013172  Bfae_06340  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.76 
 
 
211 aa  162  3e-39  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0286  two component transcriptional regulator, LuxR family  49 
 
 
203 aa  162  3e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.784033  normal  0.130384 
 
 
-
 
NC_013093  Amir_1937  two component transcriptional regulator, LuxR family  49.5 
 
 
201 aa  161  7e-39  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1079  two component transcriptional regulator, LuxR family  43.94 
 
 
200 aa  159  4e-38  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.782019  normal  0.0499592 
 
 
-
 
NC_013131  Caci_1897  two component transcriptional regulator, LuxR family  45.5 
 
 
200 aa  157  1e-37  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.299419  normal 
 
 
-
 
NC_009674  Bcer98_3871  two component LuxR family transcriptional regulator  39.5 
 
 
200 aa  156  2e-37  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00685623  n/a   
 
 
-
 
NC_011725  BCB4264_A5475  DNA-binding response regulator  40 
 
 
200 aa  154  6e-37  Bacillus cereus B4264  Bacteria  normal  0.132453  n/a   
 
 
-
 
NC_011658  BCAH187_A5531  DNA-binding response regulator  39.5 
 
 
200 aa  154  9e-37  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5200  DNA-binding response regulator  39.5 
 
 
200 aa  153  1e-36  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5597  DNA-binding response regulator  39.5 
 
 
200 aa  153  1e-36  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4334  response regulator receiver protein  50.5 
 
 
200 aa  154  1e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.574495  normal  0.636855 
 
 
-
 
NC_003909  BCE_5482  DNA-binding response regulator  39 
 
 
200 aa  153  2e-36  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2068  two component transcriptional regulator, LuxR family  44.5 
 
 
212 aa  153  2e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.385073  normal  0.894995 
 
 
-
 
NC_005957  BT9727_5034  DNA-binding response regulator  39.5 
 
 
200 aa  152  2.9999999999999998e-36  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.617082  n/a   
 
 
-
 
NC_011773  BCAH820_5444  DNA-binding response regulator  39.5 
 
 
200 aa  152  2.9999999999999998e-36  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_010184  BcerKBAB4_5150  two component LuxR family transcriptional regulator  38.5 
 
 
200 aa  152  2.9999999999999998e-36  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2770  two component transcriptional regulator, LuxR family  42.5 
 
 
201 aa  151  5e-36  Thermomonospora curvata DSM 43183  Bacteria  normal  0.282039  n/a   
 
 
-
 
NC_011772  BCG9842_B5477  DNA-binding response regulator  39 
 
 
200 aa  151  5.9999999999999996e-36  Bacillus cereus G9842  Bacteria  hitchhiker  0.00156963  hitchhiker  0.00000000000102018 
 
 
-
 
NC_013510  Tcur_2957  two component transcriptional regulator, LuxR family  47.5 
 
 
201 aa  151  5.9999999999999996e-36  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00144362  n/a   
 
 
-
 
NC_013595  Sros_4598  response regulator receiver protein  46.5 
 
 
201 aa  151  5.9999999999999996e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.053163 
 
 
-
 
NC_006274  BCZK5050  DNA-binding response regulator  39 
 
 
200 aa  151  8e-36  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_1264  two component LuxR family transcriptional regulator  47 
 
 
200 aa  150  1e-35  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.86401 
 
 
-
 
NC_013205  Aaci_0655  two component transcriptional regulator, LuxR family  43.5 
 
 
200 aa  150  1e-35  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_3654  two component transcriptional regulator, LuxR family  47.26 
 
 
201 aa  150  2e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0345388 
 
 
-
 
NC_013757  Gobs_1641  two component transcriptional regulator, LuxR family  46.5 
 
 
201 aa  149  3e-35  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0763  two component transcriptional regulator, LuxR family  46 
 
 
208 aa  148  7e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.313515 
 
 
-
 
NC_011071  Smal_0258  two component transcriptional regulator, LuxR family  43.5 
 
 
200 aa  147  8e-35  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0118  two component transcriptional regulator, LuxR family  42 
 
 
205 aa  147  9e-35  Jonesia denitrificans DSM 20603  Bacteria  normal  0.137239  normal  0.184056 
 
 
-
 
NC_008025  Dgeo_0183  two component LuxR family transcriptional regulator  46 
 
 
200 aa  142  3e-33  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.541303  normal  0.654013 
 
 
-
 
NC_013169  Ksed_00990  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  42.71 
 
 
201 aa  142  3e-33  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.666199  normal 
 
 
-
 
NC_013131  Caci_0691  two component transcriptional regulator, LuxR family  44.21 
 
 
190 aa  137  7.999999999999999e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4572  two component transcriptional regulator, LuxR family  44 
 
 
200 aa  136  2e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.318618  normal  0.115695 
 
 
-
 
NC_014210  Ndas_0782  two component transcriptional regulator, LuxR family  41.12 
 
 
220 aa  135  5e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_1908  two component transcriptional regulator, LuxR family  39.5 
 
 
201 aa  131  9e-30  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.264232 
 
 
-
 
NC_013159  Svir_02200  two component transcriptional regulator, LuxR family  42 
 
 
208 aa  129  3e-29  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_3820  two component LuxR family transcriptional regulator  37.56 
 
 
205 aa  129  3e-29  Saccharophagus degradans 2-40  Bacteria  normal  0.113202  normal 
 
 
-
 
NC_011138  MADE_03365  DNA-binding response regulator, LuxR family protein  34.67 
 
 
205 aa  127  8.000000000000001e-29  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  34.42 
 
 
224 aa  127  9.000000000000001e-29  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_010506  Swoo_4591  two component LuxR family transcriptional regulator  35.5 
 
 
198 aa  127  1.0000000000000001e-28  Shewanella woodyi ATCC 51908  Bacteria  normal  unclonable  0.00000001788 
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  39.25 
 
 
226 aa  126  3e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  33.95 
 
 
224 aa  125  3e-28  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  36.02 
 
 
222 aa  125  3e-28  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.764026 
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  34.1 
 
 
220 aa  125  4.0000000000000003e-28  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3506  two component LuxR family transcriptional regulator  36.5 
 
 
198 aa  125  4.0000000000000003e-28  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  35.47 
 
 
219 aa  125  5e-28  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_002936  DET0663  LuxR family DNA-binding response regulator  33.49 
 
 
224 aa  123  2e-27  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0697  LuxR family DNA-binding response regulator  33.49 
 
 
224 aa  123  2e-27  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  39.22 
 
 
215 aa  123  2e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  37.21 
 
 
250 aa  122  3e-27  Frankia sp. EAN1pec  Bacteria  normal  normal  0.631776 
 
 
-
 
NC_008347  Mmar10_2543  two component LuxR family transcriptional regulator  40 
 
 
202 aa  122  3e-27  Maricaulis maris MCS10  Bacteria  normal  0.446643  normal 
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  34.62 
 
 
216 aa  122  4e-27  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7316  response regulator receiver protein  40 
 
 
201 aa  120  1.9999999999999998e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  34.76 
 
 
216 aa  120  1.9999999999999998e-26  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  32.51 
 
 
216 aa  119  3e-26  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_1383  two component LuxR family transcriptional regulator  28.79 
 
 
200 aa  118  4.9999999999999996e-26  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00000320378  n/a   
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  33.96 
 
 
220 aa  118  4.9999999999999996e-26  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_009632  SaurJH1_1410  response regulator receiver  28.79 
 
 
200 aa  118  4.9999999999999996e-26  Staphylococcus aureus subsp. aureus JH1  Bacteria  hitchhiker  0.000440417  n/a   
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  30.92 
 
 
213 aa  118  6e-26  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  34.5 
 
 
217 aa  118  7e-26  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  35.38 
 
 
225 aa  117  7.999999999999999e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
NC_008532  STER_1290  DNA-binding response regulator  35 
 
 
200 aa  117  9e-26  Streptococcus thermophilus LMD-9  Bacteria  normal  0.29796  n/a   
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  35.98 
 
 
238 aa  117  9.999999999999999e-26  Frankia sp. CcI3  Bacteria  normal  normal  0.135118 
 
 
-
 
NC_013947  Snas_3639  two component transcriptional regulator, LuxR family  37.04 
 
 
215 aa  117  9.999999999999999e-26  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.274763  normal 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  38.89 
 
 
220 aa  117  1.9999999999999998e-25  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  35.12 
 
 
241 aa  115  3e-25  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.858367 
 
 
-
 
NC_013235  Namu_0544  two component transcriptional regulator, LuxR family  36.57 
 
 
215 aa  116  3e-25  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  34.5 
 
 
216 aa  115  3.9999999999999997e-25  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2668  two component LuxR family transcriptional regulator  37.44 
 
 
213 aa  115  3.9999999999999997e-25  Pseudomonas mendocina ymp  Bacteria  normal  0.18046  normal 
 
 
-
 
NC_013595  Sros_8800  response regulator receiver protein  37.8 
 
 
215 aa  115  3.9999999999999997e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  0.752334  normal 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  36.41 
 
 
213 aa  115  6e-25  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1355  two component LuxR family transcriptional regulator  34.58 
 
 
230 aa  115  6e-25  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_2443  two component LuxR family transcriptional regulator  37.62 
 
 
215 aa  114  6.9999999999999995e-25  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  34.11 
 
 
223 aa  114  6.9999999999999995e-25  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0556432 
 
 
-
 
NC_009523  RoseRS_4275  two component LuxR family transcriptional regulator  33.8 
 
 
226 aa  114  6.9999999999999995e-25  Roseiflexus sp. RS-1  Bacteria  normal  0.798613  normal  0.287125 
 
 
-
 
NC_008345  Sfri_0357  two component transcriptional regulator, LuxR family protein  35.78 
 
 
202 aa  114  8.999999999999998e-25  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
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