More than 300 homologs were found in PanDaTox collection
for query gene Bcav_0335 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  100 
 
 
220 aa  417  1e-116  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_3222  two component transcriptional regulator, LuxR family  69.91 
 
 
218 aa  254  5e-67  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000001545 
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  60.38 
 
 
213 aa  234  1.0000000000000001e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_17000  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  65.02 
 
 
233 aa  233  1.0000000000000001e-60  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.523967 
 
 
-
 
NC_013093  Amir_2225  two component transcriptional regulator, LuxR family  65.4 
 
 
209 aa  233  3e-60  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2233  two component transcriptional regulator, LuxR family  65.09 
 
 
232 aa  230  1e-59  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00197033  n/a   
 
 
-
 
NC_014158  Tpau_1874  two component transcriptional regulator, LuxR family  61.86 
 
 
213 aa  228  4e-59  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.635222  n/a   
 
 
-
 
NC_007333  Tfu_1403  LuxR response regulator receiver  59.72 
 
 
214 aa  224  7e-58  Thermobifida fusca YX  Bacteria  normal  0.676683  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  56.62 
 
 
226 aa  215  5e-55  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  59.09 
 
 
229 aa  213  9.999999999999999e-55  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  56.42 
 
 
230 aa  212  2.9999999999999995e-54  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  55.91 
 
 
226 aa  211  5.999999999999999e-54  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  56.36 
 
 
226 aa  211  7e-54  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  56.82 
 
 
226 aa  211  7.999999999999999e-54  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  55.86 
 
 
227 aa  209  2e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  55.96 
 
 
222 aa  208  4e-53  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  57.87 
 
 
220 aa  207  1e-52  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  56.44 
 
 
230 aa  206  2e-52  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  54.84 
 
 
230 aa  206  2e-52  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  55.71 
 
 
222 aa  204  6e-52  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  57.99 
 
 
241 aa  204  6e-52  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.23 
 
 
229 aa  204  1e-51  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  52.23 
 
 
224 aa  202  2e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  57.73 
 
 
225 aa  203  2e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  52.51 
 
 
225 aa  202  3e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  52.53 
 
 
223 aa  202  4e-51  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  50.67 
 
 
224 aa  201  6e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  56.42 
 
 
220 aa  201  8e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  56.25 
 
 
230 aa  201  9e-51  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  52.75 
 
 
239 aa  200  9.999999999999999e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  53.6 
 
 
225 aa  200  9.999999999999999e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013595  Sros_3669  response regulator receiver protein  57.21 
 
 
213 aa  199  1.9999999999999998e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  55.25 
 
 
217 aa  200  1.9999999999999998e-50  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  52.65 
 
 
234 aa  199  3.9999999999999996e-50  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  49.17 
 
 
250 aa  198  5e-50  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  55 
 
 
226 aa  197  9e-50  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  54.79 
 
 
219 aa  197  1.0000000000000001e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  51.83 
 
 
230 aa  197  1.0000000000000001e-49  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  54.75 
 
 
226 aa  196  2.0000000000000003e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013947  Snas_4836  two component transcriptional regulator, LuxR family  58.8 
 
 
210 aa  196  2.0000000000000003e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  53.42 
 
 
225 aa  196  2.0000000000000003e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  54.17 
 
 
215 aa  196  3e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  53.46 
 
 
220 aa  196  3e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  53.67 
 
 
218 aa  195  4.0000000000000005e-49  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  50.69 
 
 
221 aa  195  4.0000000000000005e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  55.5 
 
 
215 aa  195  5.000000000000001e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  51.39 
 
 
218 aa  195  5.000000000000001e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.83 
 
 
222 aa  195  5.000000000000001e-49  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.811978 
 
 
-
 
NC_013131  Caci_6094  two component transcriptional regulator, LuxR family  53.95 
 
 
235 aa  195  6e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.634688  normal  0.121163 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  52.49 
 
 
241 aa  194  8.000000000000001e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  53.46 
 
 
215 aa  194  8.000000000000001e-49  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_007777  Francci3_0303  two component LuxR family transcriptional regulator  54.79 
 
 
214 aa  192  2e-48  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  53.92 
 
 
214 aa  192  3e-48  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  50.45 
 
 
221 aa  192  3e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  53.48 
 
 
244 aa  192  3e-48  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_013131  Caci_6529  two component transcriptional regulator, LuxR family  52.23 
 
 
224 aa  192  4e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.270807  normal  0.114568 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  55.25 
 
 
221 aa  192  4e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  54.38 
 
 
217 aa  192  4e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  56.31 
 
 
220 aa  192  4e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  51.16 
 
 
221 aa  192  5e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.16 
 
 
222 aa  191  7e-48  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  50.9 
 
 
222 aa  191  8e-48  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  50.68 
 
 
239 aa  191  8e-48  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  53.42 
 
 
223 aa  190  1e-47  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  54.42 
 
 
225 aa  191  1e-47  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013235  Namu_0651  two component transcriptional regulator, LuxR family  51.35 
 
 
241 aa  191  1e-47  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  51.14 
 
 
224 aa  190  1e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  56.16 
 
 
222 aa  190  1e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  52.53 
 
 
220 aa  190  2e-47  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1125  two component transcriptional regulator, LuxR family  54.02 
 
 
229 aa  189  2e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.306134 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  50.69 
 
 
220 aa  189  2e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  49.58 
 
 
239 aa  189  2.9999999999999997e-47  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  51.38 
 
 
223 aa  189  2.9999999999999997e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  52.29 
 
 
247 aa  188  4e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  52.51 
 
 
221 aa  188  5.999999999999999e-47  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  50.22 
 
 
234 aa  188  5.999999999999999e-47  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  47.19 
 
 
234 aa  187  1e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  51.58 
 
 
225 aa  186  2e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_009921  Franean1_6511  two component LuxR family transcriptional regulator  52.29 
 
 
215 aa  186  2e-46  Frankia sp. EAN1pec  Bacteria  normal  normal  0.100644 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  49.78 
 
 
219 aa  186  2e-46  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  52.51 
 
 
221 aa  186  2e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  49.77 
 
 
223 aa  186  3e-46  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000386408  hitchhiker  0.000570848 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  54.38 
 
 
224 aa  186  3e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013595  Sros_3998  response regulator receiver protein  53.46 
 
 
233 aa  185  4e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.363745  normal  0.263649 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  52.63 
 
 
227 aa  185  4e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  47.51 
 
 
225 aa  185  5e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  53.15 
 
 
215 aa  185  5e-46  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  51.85 
 
 
226 aa  185  5e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  47.25 
 
 
223 aa  185  5e-46  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  51.35 
 
 
225 aa  184  6e-46  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_014151  Cfla_0857  two component transcriptional regulator, LuxR family  52.49 
 
 
219 aa  185  6e-46  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0762303  normal 
 
 
-
 
NC_013530  Xcel_0239  two component transcriptional regulator, LuxR family  49.32 
 
 
230 aa  184  7e-46  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  50 
 
 
224 aa  184  8e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  50.69 
 
 
225 aa  184  8e-46  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  51.15 
 
 
217 aa  184  9e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  52.19 
 
 
249 aa  183  1.0000000000000001e-45  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  47.75 
 
 
261 aa  184  1.0000000000000001e-45  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  48.86 
 
 
227 aa  184  1.0000000000000001e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  50 
 
 
228 aa  184  1.0000000000000001e-45  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  49.32 
 
 
225 aa  184  1.0000000000000001e-45  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000789071 
 
 
-
 
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