56 homologs were found in PanDaTox collection
for query gene Bcav_0058 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012669  Bcav_0058  extracellular solute-binding protein, family 1  100 
 
 
551 aa  1112    Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.182513 
 
 
-
 
NC_013521  Sked_02830  ABC-type sugar transport system, periplasmic component  59.12 
 
 
537 aa  626  1e-178  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.161796  normal 
 
 
-
 
NC_008527  LACR_0763  ABC-type sugar transport system, periplasmic component  30.99 
 
 
520 aa  189  8e-47  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.34388  n/a   
 
 
-
 
NC_008541  Arth_0426  extracellular solute-binding protein  28.77 
 
 
536 aa  166  1.0000000000000001e-39  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_17890  ABC-type sugar transport system, periplasmic component  27.44 
 
 
527 aa  163  7e-39  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0395  extracellular solute-binding protein  32.95 
 
 
559 aa  121  3e-26  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1016  extracellular solute-binding protein family 1  25.6 
 
 
585 aa  86.7  0.000000000000001  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3114  extracellular solute-binding protein family 1  32.21 
 
 
510 aa  84.7  0.000000000000004  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013515  Smon_0123  extracellular solute-binding protein family 1  24.23 
 
 
505 aa  84.7  0.000000000000004  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_012034  Athe_2330  extracellular solute-binding protein family 1  21.96 
 
 
533 aa  79.7  0.0000000000001  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_2193  extracellular solute-binding protein  23.08 
 
 
557 aa  79.7  0.0000000000001  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_33170  carbohydrate-binding protein  29.87 
 
 
551 aa  78.6  0.0000000000003  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0165973  normal 
 
 
-
 
NC_014165  Tbis_1561  sugar ABC transporter periplasmic component-like protein  23.83 
 
 
553 aa  78.2  0.0000000000004  Thermobispora bispora DSM 43833  Bacteria  normal  0.129044  normal 
 
 
-
 
NC_013172  Bfae_29210  ABC-type sugar transport system, periplasmic component  28.8 
 
 
503 aa  70.9  0.00000000005  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0487  extracellular solute-binding protein  25.38 
 
 
558 aa  69.7  0.0000000001  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3316  extracellular solute-binding protein  32.96 
 
 
509 aa  69.7  0.0000000001  Arthrobacter sp. FB24  Bacteria  normal  0.578802  n/a   
 
 
-
 
NC_013093  Amir_1979  extracellular solute-binding protein family 1  23.95 
 
 
542 aa  68.6  0.0000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2032  extracellular solute-binding protein family 1  31.52 
 
 
531 aa  68.6  0.0000000003  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0931  extracellular solute-binding protein  25 
 
 
544 aa  68.2  0.0000000004  Clostridium phytofermentans ISDg  Bacteria  normal  0.0552135  n/a   
 
 
-
 
NC_013946  Mrub_0279  extracellular solute-binding protein family 1  34.88 
 
 
510 aa  66.2  0.000000001  Meiothermus ruber DSM 1279  Bacteria  normal  0.795384  normal 
 
 
-
 
NC_014151  Cfla_2806  extracellular solute-binding protein family 1  22.54 
 
 
556 aa  66.6  0.000000001  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.636428  normal  0.0208064 
 
 
-
 
NC_012669  Bcav_3323  extracellular solute-binding protein family 1  25.09 
 
 
552 aa  65.5  0.000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.175879  normal  0.023879 
 
 
-
 
NC_012034  Athe_2378  extracellular solute-binding protein family 1  23.49 
 
 
486 aa  65.1  0.000000003  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2784  extracellular solute-binding protein family 1  25.07 
 
 
573 aa  64.7  0.000000005  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1101  extracellular solute-binding protein family 1  28.03 
 
 
567 aa  63.2  0.00000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_0775  extracellular solute-binding protein  23.45 
 
 
523 aa  61.6  0.00000004  Clostridium phytofermentans ISDg  Bacteria  normal  0.062981  n/a   
 
 
-
 
NC_013530  Xcel_0369  extracellular solute-binding protein family 1  24.4 
 
 
556 aa  60.8  0.00000006  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2998  extracellular solute-binding protein family 1  24.24 
 
 
552 aa  59.7  0.0000001  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.58673  normal  0.432395 
 
 
-
 
NC_013172  Bfae_13000  ABC-type sugar transport system, periplasmic component  29.41 
 
 
239 aa  60.1  0.0000001  Brachybacterium faecium DSM 4810  Bacteria  normal  0.156871  n/a   
 
 
-
 
NC_011898  Ccel_0150  extracellular solute-binding protein family 1  23.23 
 
 
567 aa  59.3  0.0000002  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1870  extracellular solute-binding protein family 1  25 
 
 
492 aa  57  0.0000009  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.440802  normal  0.959587 
 
 
-
 
NC_013172  Bfae_01630  ABC-type sugar transport system, periplasmic component  22.72 
 
 
557 aa  56.2  0.000002  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_12990  ABC-type sugar transport system, periplasmic component  28.51 
 
 
511 aa  55.1  0.000003  Brachybacterium faecium DSM 4810  Bacteria  normal  0.232436  n/a   
 
 
-
 
NC_013411  GYMC61_2709  extracellular solute-binding protein family 1  26.42 
 
 
549 aa  53.1  0.00001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008527  LACR_1580  ABC-type sugar transport system, periplasmic component  24.53 
 
 
544 aa  52.8  0.00002  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0663  ABC-type sugar transport system periplasmic component-like protein  23.63 
 
 
556 aa  52.8  0.00002  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00000120034  n/a   
 
 
-
 
NC_013174  Jden_2399  extracellular solute-binding protein family 1  27.83 
 
 
553 aa  52.4  0.00002  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000923736  normal 
 
 
-
 
NC_011898  Ccel_0145  extracellular solute-binding protein family 1  24.55 
 
 
530 aa  52  0.00003  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2662  hypothetical protein  23.05 
 
 
557 aa  51.6  0.00003  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3712  extracellular solute-binding protein family 1  28.9 
 
 
421 aa  51.6  0.00004  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.411366 
 
 
-
 
NC_012034  Athe_2091  extracellular solute-binding protein family 1  25.68 
 
 
522 aa  50.4  0.00008  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00542537  n/a   
 
 
-
 
NC_012669  Bcav_3388  extracellular solute-binding protein family 1  29.31 
 
 
547 aa  49.7  0.0001  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_0341  extracellular solute-binding protein  25 
 
 
537 aa  49.3  0.0002  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2094  extracellular solute-binding protein family 1  28.91 
 
 
441 aa  49.3  0.0002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000152964 
 
 
-
 
NC_010001  Cphy_2733  extracellular solute-binding protein  30.07 
 
 
533 aa  49.3  0.0002  Clostridium phytofermentans ISDg  Bacteria  unclonable  0.000000105202  n/a   
 
 
-
 
NC_013131  Caci_3821  extracellular solute-binding protein family 1  23.77 
 
 
553 aa  49.3  0.0002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.302994  normal  0.0761262 
 
 
-
 
NC_008541  Arth_0482  extracellular solute-binding protein  30.16 
 
 
443 aa  48.9  0.0002  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00268905  n/a   
 
 
-
 
NC_009338  Mflv_3775  extracellular solute-binding protein  32.46 
 
 
441 aa  48.1  0.0004  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.577316  normal  0.394592 
 
 
-
 
NC_013526  Tter_1990  extracellular solute-binding protein family 1  26.32 
 
 
366 aa  48.1  0.0004  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_2624  extracellular solute-binding protein  33.18 
 
 
444 aa  48.1  0.0004  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_20480  ABC-type sugar transport system, periplasmic component  23.06 
 
 
559 aa  46.2  0.002  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.497394  normal  0.432529 
 
 
-
 
NC_012880  Dd703_0698  extracellular solute-binding protein family 1  24.23 
 
 
428 aa  45.1  0.003  Dickeya dadantii Ech703  Bacteria  normal  0.0317884  n/a   
 
 
-
 
NC_013172  Bfae_01480  ABC-type sugar transport system, periplasmic component  28.26 
 
 
435 aa  45.4  0.003  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_2654  sugar ABC transporter substrate-binding protein  25.97 
 
 
586 aa  43.9  0.007  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1252  extracellular solute-binding protein family 1  25.34 
 
 
571 aa  43.5  0.009  Clostridium cellulolyticum H10  Bacteria  normal  0.670255  n/a   
 
 
-
 
NC_014165  Tbis_1105  extracellular solute-binding protein family 1  25.91 
 
 
443 aa  43.5  0.01  Thermobispora bispora DSM 43833  Bacteria  normal  0.698754  normal  0.0706181 
 
 
-
 
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