14 homologs were found in PanDaTox collection
for query gene Bamb_6050 on replicon NC_008392
Organism: Burkholderia ambifaria AMMD



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008392  Bamb_6050  acyl carrier protein  100 
 
 
82 aa  167  4e-41  Burkholderia ambifaria AMMD  Bacteria  decreased coverage  0.00630342  normal 
 
 
-
 
NC_010557  BamMC406_5820  acyl carrier protein  97.56 
 
 
82 aa  165  2e-40  Burkholderia ambifaria MC40-6  Bacteria  normal  0.185115  normal 
 
 
-
 
NC_009078  BURPS1106A_A1580  phosphopantetheine attachment site, putative  63.16 
 
 
79 aa  104  3e-22  Burkholderia pseudomallei 1106a  Bacteria  normal  0.861905  n/a   
 
 
-
 
NC_009075  BURPS668_A1660  phosphopantetheine attachment site, putative  63.16 
 
 
79 aa  105  3e-22  Burkholderia pseudomallei 668  Bacteria  normal  0.0832602  n/a   
 
 
-
 
NC_007650  BTH_II1225  phosphopantetheine-containing protein  63.16 
 
 
81 aa  81.6  4e-15  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1573  thioesterase  35.48 
 
 
561 aa  42.4  0.002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_1976  amino acid adenylation  32.84 
 
 
1373 aa  41.6  0.004  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A2463  bacitracin synthetase 1  32.73 
 
 
4960 aa  40.8  0.006  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011738  PCC7424_5756  amino acid adenylation domain protein  35 
 
 
2581 aa  40.8  0.006  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.314171 
 
 
-
 
NC_011772  BCG9842_B2873  bacitracin synthetase 1  32.73 
 
 
4960 aa  40.8  0.007  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_008820  P9303_10861  hypothetical protein  31.34 
 
 
2199 aa  40.4  0.008  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_010625  Bphy_7003  acetoacetyl-CoA synthase  34.43 
 
 
1056 aa  40.4  0.009  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2592  amino acid adenylation domain protein  31.03 
 
 
2454 aa  40.4  0.009  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_0845  amino acid adenylation domain-containing protein  27.78 
 
 
1119 aa  40  0.01  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.0731661  normal 
 
 
-
 
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