More than 300 homologs were found in PanDaTox collection
for query gene Bamb_5330 on replicon NC_008391
Organism: Burkholderia ambifaria AMMD



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008391  Bamb_5330  two component LuxR family transcriptional regulator  100 
 
 
215 aa  420  1e-117  Burkholderia ambifaria AMMD  Bacteria  normal  0.858277  normal 
 
 
-
 
NC_010552  BamMC406_3499  two component LuxR family transcriptional regulator  99.01 
 
 
203 aa  394  1e-109  Burkholderia ambifaria MC40-6  Bacteria  normal  hitchhiker  0.00551314 
 
 
-
 
NC_010515  Bcenmc03_3925  two component LuxR family transcriptional regulator  88.37 
 
 
215 aa  370  1e-101  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_3595  two component LuxR family transcriptional regulator  87.91 
 
 
215 aa  369  1e-101  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B2520  two component LuxR family transcriptional regulator  88.26 
 
 
214 aa  365  1e-100  Burkholderia sp. 383  Bacteria  normal  0.943169  normal  0.310419 
 
 
-
 
NC_010676  Bphyt_5584  two component transcriptional regulator, LuxR family  68.22 
 
 
215 aa  298  5e-80  Burkholderia phytofirmans PsJN  Bacteria  normal  0.282667  normal 
 
 
-
 
NC_010676  Bphyt_6314  two component transcriptional regulator, LuxR family  66.36 
 
 
216 aa  293  1e-78  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1850  two component LuxR family transcriptional regulator  67.79 
 
 
216 aa  292  3e-78  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1652  two component LuxR family transcriptional regulator  65.89 
 
 
215 aa  288  4e-77  Burkholderia sp. 383  Bacteria  normal  0.187578  normal  0.308689 
 
 
-
 
NC_010552  BamMC406_4248  two component LuxR family transcriptional regulator  65.89 
 
 
215 aa  288  6e-77  Burkholderia ambifaria MC40-6  Bacteria  normal  0.206342  normal 
 
 
-
 
NC_008391  Bamb_3774  two component LuxR family transcriptional regulator  65.89 
 
 
215 aa  288  6e-77  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.329832 
 
 
-
 
NC_010622  Bphy_1137  two component LuxR family transcriptional regulator  66.83 
 
 
214 aa  287  7e-77  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_5989  two component LuxR family transcriptional regulator  65.89 
 
 
215 aa  287  9e-77  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_4365  two component LuxR family transcriptional regulator  65.89 
 
 
215 aa  287  9e-77  Burkholderia cenocepacia HI2424  Bacteria  normal  0.902614  normal 
 
 
-
 
NC_010086  Bmul_4256  two component LuxR family transcriptional regulator  65.42 
 
 
215 aa  286  2e-76  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.282152  normal 
 
 
-
 
NC_008061  Bcen_4002  two component LuxR family transcriptional regulator  65.89 
 
 
215 aa  286  2e-76  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0703  LuxR family DNA-binding response regulator  64.95 
 
 
215 aa  285  5e-76  Burkholderia mallei ATCC 23344  Bacteria  normal  0.533722  n/a   
 
 
-
 
NC_008835  BMA10229_0760  LuxR family DNA-binding response regulator  64.95 
 
 
215 aa  285  5e-76  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1154  LuxR family DNA-binding response regulator  64.95 
 
 
215 aa  285  5e-76  Burkholderia pseudomallei 1106a  Bacteria  normal  0.324728  n/a   
 
 
-
 
NC_009079  BMA10247_A1725  LuxR family DNA-binding response regulator  64.95 
 
 
215 aa  285  5e-76  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1228  LuxR family DNA-binding response regulator  64.49 
 
 
215 aa  284  9e-76  Burkholderia pseudomallei 668  Bacteria  normal  0.0904383  n/a   
 
 
-
 
NC_007650  BTH_II1570  LuxR family DNA-binding response regulator  64.49 
 
 
215 aa  283  1.0000000000000001e-75  Burkholderia thailandensis E264  Bacteria  normal  0.17909  n/a   
 
 
-
 
NC_007650  BTH_II1247  LuxR family DNA-binding response regulator  65.38 
 
 
215 aa  283  2.0000000000000002e-75  Burkholderia thailandensis E264  Bacteria  normal  0.32702  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1551  LuxR family DNA-binding response regulator  65.38 
 
 
215 aa  282  3.0000000000000004e-75  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0127  LuxR family DNA-binding response regulator  65.38 
 
 
215 aa  282  3.0000000000000004e-75  Burkholderia pseudomallei 1710b  Bacteria  normal  0.914848  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2427  LuxR family DNA-binding response regulator  64.95 
 
 
282 aa  282  3.0000000000000004e-75  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1634  LuxR family DNA-binding response regulator  65.38 
 
 
215 aa  282  3.0000000000000004e-75  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_5813  two component LuxR family transcriptional regulator  67.31 
 
 
215 aa  281  5.000000000000001e-75  Burkholderia phymatum STM815  Bacteria  normal  normal  0.118405 
 
 
-
 
NC_010087  Bmul_5903  two component LuxR family transcriptional regulator  61.54 
 
 
215 aa  275  3e-73  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.68975  normal  0.398777 
 
 
-
 
NC_010557  BamMC406_6196  two component LuxR family transcriptional regulator  60.58 
 
 
215 aa  272  3e-72  Burkholderia ambifaria MC40-6  Bacteria  normal  0.280791  normal  0.522243 
 
 
-
 
NC_010625  Bphy_7047  two component LuxR family transcriptional regulator  62.02 
 
 
215 aa  266  2e-70  Burkholderia phymatum STM815  Bacteria  normal  normal  0.976007 
 
 
-
 
NC_007347  Reut_A1216  two component LuxR family transcriptional regulator  60.58 
 
 
215 aa  248  4e-65  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  60.78 
 
 
214 aa  236  2e-61  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_012857  Rpic12D_4559  two component transcriptional regulator, LuxR family  59.13 
 
 
215 aa  226  3e-58  Ralstonia pickettii 12D  Bacteria  normal  0.0669727  normal  0.0839611 
 
 
-
 
NC_010678  Rpic_4426  two component transcriptional regulator, LuxR family  59.13 
 
 
215 aa  226  3e-58  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc0192  response regulator transcription regulator protein  58.17 
 
 
215 aa  221  8e-57  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.028731 
 
 
-
 
NC_008781  Pnap_0790  two component LuxR family transcriptional regulator  48.54 
 
 
214 aa  207  8e-53  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.870503  normal  0.997505 
 
 
-
 
NC_010524  Lcho_0901  two component LuxR family transcriptional regulator  52.17 
 
 
235 aa  206  1e-52  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007298  Daro_1400  two component LuxR family transcriptional regulator  47.34 
 
 
216 aa  200  9.999999999999999e-51  Dechloromonas aromatica RCB  Bacteria  normal  0.973321  normal  0.0605156 
 
 
-
 
NC_006349  BMAA0615  LuxR family DNA-binding response regulator  54.37 
 
 
212 aa  199  1.9999999999999998e-50  Burkholderia mallei ATCC 23344  Bacteria  normal  0.26011  n/a   
 
 
-
 
NC_007948  Bpro_4296  two component LuxR family transcriptional regulator  51.44 
 
 
214 aa  198  5e-50  Polaromonas sp. JS666  Bacteria  normal  0.891496  normal 
 
 
-
 
NC_008835  BMA10229_0853  LuxR family DNA-binding response regulator  53.88 
 
 
212 aa  198  6e-50  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2347  GerE family regulatory protein  54.37 
 
 
212 aa  198  6e-50  Burkholderia pseudomallei 1710b  Bacteria  normal  0.925531  n/a   
 
 
-
 
NC_009079  BMA10247_A1818  LuxR family DNA-binding response regulator  53.88 
 
 
212 aa  198  6e-50  Burkholderia mallei NCTC 10247  Bacteria  normal  0.204731  n/a   
 
 
-
 
NC_009075  BURPS668_A1132  LuxR family DNA-binding response regulator  54.37 
 
 
212 aa  198  6e-50  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1047  LuxR family DNA-binding response regulator  54.37 
 
 
212 aa  198  6e-50  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_1167  two component LuxR family transcriptional regulator  50 
 
 
213 aa  194  9e-49  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_1572  two component LuxR family transcriptional regulator  47.37 
 
 
218 aa  182  3e-45  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.972408 
 
 
-
 
NC_010627  Bphy_7764  two component LuxR family transcriptional regulator  44.98 
 
 
210 aa  182  4.0000000000000006e-45  Burkholderia phymatum STM815  Bacteria  normal  0.527093  normal 
 
 
-
 
NC_008825  Mpe_A0581  two component LuxR family transcriptional regulator  44.93 
 
 
210 aa  181  7e-45  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc0292  response regulator transcription regulator protein  45.67 
 
 
210 aa  181  8.000000000000001e-45  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_008785  BMASAVP1_A2955  LuxR family DNA-binding response regulator  45.89 
 
 
218 aa  180  1e-44  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0231  LuxR family DNA-binding response regulator  45.89 
 
 
218 aa  180  1e-44  Burkholderia pseudomallei 668  Bacteria  normal  0.214964  n/a   
 
 
-
 
NC_007434  BURPS1710b_0425  LuxR family DNA-binding response regulator  45.89 
 
 
218 aa  180  1e-44  Burkholderia pseudomallei 1710b  Bacteria  normal  0.0536791  n/a   
 
 
-
 
NC_009080  BMA10247_3391  LuxR family DNA-binding response regulator  45.89 
 
 
218 aa  180  1e-44  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2133  LuxR family DNA-binding response regulator  45.89 
 
 
218 aa  180  1e-44  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0209  LuxR family DNA-binding response regulator  46.38 
 
 
218 aa  180  1e-44  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0243  LuxR family DNA-binding response regulator  45.89 
 
 
218 aa  180  1e-44  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6558  two component LuxR family transcriptional regulator  44.5 
 
 
210 aa  181  1e-44  Burkholderia phymatum STM815  Bacteria  normal  normal  0.458284 
 
 
-
 
NC_007404  Tbd_1588  two component LuxR family transcriptional regulator  44.17 
 
 
215 aa  180  2e-44  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.731747  normal  0.987016 
 
 
-
 
NC_007973  Rmet_0090  two component LuxR family transcriptional regulator  44.71 
 
 
210 aa  180  2e-44  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_0153  two component transcriptional regulator, LuxR family  45.67 
 
 
210 aa  180  2e-44  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA3290  LuxR family DNA-binding response regulator  45.89 
 
 
455 aa  178  4.999999999999999e-44  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0121  two component LuxR family transcriptional regulator  44.71 
 
 
210 aa  178  4.999999999999999e-44  Ralstonia eutropha JMP134  Bacteria  normal  0.830531  n/a   
 
 
-
 
NC_010682  Rpic_0145  two component transcriptional regulator, LuxR family  45.19 
 
 
210 aa  178  4.999999999999999e-44  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_2966  two component LuxR family transcriptional regulator  44.93 
 
 
218 aa  178  5.999999999999999e-44  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.288922 
 
 
-
 
NC_008390  Bamb_3100  two component LuxR family transcriptional regulator  45.37 
 
 
218 aa  177  1e-43  Burkholderia ambifaria AMMD  Bacteria  normal  0.650822  n/a   
 
 
-
 
NC_007517  Gmet_2158  two component LuxR family transcriptional regulator  43.2 
 
 
210 aa  176  3e-43  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.0301144 
 
 
-
 
NC_008752  Aave_4382  two component LuxR family transcriptional regulator  43.27 
 
 
209 aa  175  4e-43  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6235  two component transcriptional regulator, LuxR family  43.13 
 
 
210 aa  174  7e-43  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.612124 
 
 
-
 
NC_010681  Bphyt_0374  two component transcriptional regulator, LuxR family  46.38 
 
 
218 aa  174  7e-43  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II1634  LuxR family DNA-binding response regulator  51.92 
 
 
214 aa  174  8e-43  Burkholderia thailandensis E264  Bacteria  normal  0.414245  n/a   
 
 
-
 
NC_007347  Reut_A1146  response regulator receiver  60.53 
 
 
209 aa  174  9e-43  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A1235  two component LuxR family transcriptional regulator  44.23 
 
 
211 aa  174  9.999999999999999e-43  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1987  two component LuxR family transcriptional regulator  42.03 
 
 
215 aa  173  1.9999999999999998e-42  Methylobacillus flagellatus KT  Bacteria  normal  0.0949899  normal 
 
 
-
 
NC_010524  Lcho_1402  two component LuxR family transcriptional regulator  44.93 
 
 
211 aa  172  5e-42  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007947  Mfla_0945  two component LuxR family transcriptional regulator  39.42 
 
 
210 aa  171  6.999999999999999e-42  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1089  two component LuxR family transcriptional regulator  39.42 
 
 
210 aa  171  6.999999999999999e-42  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_3052  two component LuxR family transcriptional regulator  43.96 
 
 
218 aa  171  6.999999999999999e-42  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.317078  normal 
 
 
-
 
NC_010622  Bphy_0097  two component LuxR family transcriptional regulator  44.44 
 
 
218 aa  171  7.999999999999999e-42  Burkholderia phymatum STM815  Bacteria  normal  0.605108  normal 
 
 
-
 
NC_007510  Bcep18194_A6403  two component LuxR family transcriptional regulator  43.48 
 
 
271 aa  171  1e-41  Burkholderia sp. 383  Bacteria  normal  normal  0.285313 
 
 
-
 
NC_007948  Bpro_0881  two component LuxR family transcriptional regulator  39.42 
 
 
210 aa  170  1e-41  Polaromonas sp. JS666  Bacteria  normal  0.464883  normal  0.594453 
 
 
-
 
NC_007951  Bxe_A1460  two component LuxR family transcriptional regulator  42.31 
 
 
210 aa  169  2e-41  Burkholderia xenovorans LB400  Bacteria  normal  0.39219  normal  0.352919 
 
 
-
 
NC_007951  Bxe_A4347  two component LuxR family transcriptional regulator  44.44 
 
 
218 aa  170  2e-41  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.705126 
 
 
-
 
NC_008752  Aave_3862  two component LuxR family transcriptional regulator  40.38 
 
 
210 aa  169  2e-41  Acidovorax citrulli AAC00-1  Bacteria  normal  0.734244  normal 
 
 
-
 
NC_010508  Bcenmc03_3074  two component LuxR family transcriptional regulator  43 
 
 
218 aa  169  3e-41  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_2600  response regulator  40.09 
 
 
214 aa  169  3e-41  Shewanella baltica OS185  Bacteria  hitchhiker  0.000388579  n/a   
 
 
-
 
NC_011992  Dtpsy_2832  two component transcriptional regulator, LuxR family  40.87 
 
 
210 aa  169  3e-41  Acidovorax ebreus TPSY  Bacteria  normal  0.988429  n/a   
 
 
-
 
NC_011663  Sbal223_1782  response regulator  40.09 
 
 
214 aa  169  3e-41  Shewanella baltica OS223  Bacteria  normal  0.0381154  hitchhiker  0.0000000750596 
 
 
-
 
NC_010681  Bphyt_2656  two component transcriptional regulator, LuxR family  41.83 
 
 
210 aa  169  3e-41  Burkholderia phytofirmans PsJN  Bacteria  normal  0.756738  normal  0.520546 
 
 
-
 
NC_009997  Sbal195_2677  response regulator  40.09 
 
 
214 aa  169  3e-41  Shewanella baltica OS195  Bacteria  normal  0.0738952  normal  0.957867 
 
 
-
 
NC_008542  Bcen2424_3055  two component LuxR family transcriptional regulator  43 
 
 
218 aa  169  3e-41  Burkholderia cenocepacia HI2424  Bacteria  normal  0.327843  n/a   
 
 
-
 
NC_008782  Ajs_3509  two component LuxR family transcriptional regulator  40.87 
 
 
239 aa  169  3e-41  Acidovorax sp. JS42  Bacteria  normal  0.325902  normal 
 
 
-
 
NC_008060  Bcen_2441  two component LuxR family transcriptional regulator  43 
 
 
218 aa  169  3e-41  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2562  response regulator  40.09 
 
 
214 aa  169  3e-41  Shewanella baltica OS155  Bacteria  normal  0.0171044  n/a   
 
 
-
 
NC_008786  Veis_0032  two component LuxR family transcriptional regulator  41.83 
 
 
210 aa  168  5e-41  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.245451  normal 
 
 
-
 
NC_007614  Nmul_A1336  two component LuxR family transcriptional regulator  40.58 
 
 
208 aa  168  5e-41  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_1608  response regulator  40.09 
 
 
214 aa  168  5e-41  Shewanella sp. ANA-3  Bacteria  unclonable  0.00000000660452  normal  0.150334 
 
 
-
 
NC_012791  Vapar_4108  two component transcriptional regulator, LuxR family  40.38 
 
 
210 aa  168  5e-41  Variovorax paradoxus S110  Bacteria  normal  0.755468  n/a   
 
 
-
 
NC_008321  Shewmr4_1547  response regulator  40.09 
 
 
214 aa  168  5e-41  Shewanella sp. MR-4  Bacteria  hitchhiker  0.0000288339  normal 
 
 
-
 
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