7 homologs were found in PanDaTox collection
for query gene Bamb_3589 on replicon NC_008391
Organism: Burkholderia ambifaria AMMD



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008391  Bamb_3589  hypothetical protein  100 
 
 
943 aa  1883  Burkholderia ambifaria AMMD  Bacteria  decreased coverage  0.00513024  normal  0.358288 
 
 
-
 
NC_009720  Xaut_3567  hypothetical protein  24.2 
 
 
1798 aa  63.5  2e-08  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.621176 
 
 
-
 
NC_007951  Bxe_A1531  hypothetical protein  29.63 
 
 
459 aa  58.9  4e-07  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.219204 
 
 
-
 
NC_007952  Bxe_B2193  hypothetical protein  29.32 
 
 
469 aa  56.6  2e-06  Burkholderia xenovorans LB400  Bacteria  normal  0.907078  normal 
 
 
-
 
NC_009636  Smed_0885  hypothetical protein  23.39 
 
 
788 aa  53.1  2e-05  Sinorhizobium medicae WSM419  Bacteria  normal  0.854858  normal 
 
 
-
 
NC_012560  Avin_49360  hypothetical protein  30.23 
 
 
901 aa  47  0.002  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1373  YD repeat-containing protein  23.55 
 
 
1917 aa  45.1  0.006  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
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