More than 300 homologs were found in PanDaTox collection
for query gene BamMC406_6196 on replicon NC_010557
Organism: Burkholderia ambifaria MC40-6



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010557  BamMC406_6196  two component LuxR family transcriptional regulator  100 
 
 		 215 aa  441  1e-123  Burkholderia ambifaria MC40-6  Bacteria  normal  0.280791  normal  0.522243 
 
 
-
 
NC_010087  Bmul_5903  two component LuxR family transcriptional regulator  93.95 
 
 		 215 aa  416  9.999999999999999e-116  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.68975  normal  0.398777 
 
 
-
 
NC_010086  Bmul_4256  two component LuxR family transcriptional regulator  82.33 
 
 		 215 aa  374  1e-103  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.282152  normal  1 
 
 
-
 
NC_010552  BamMC406_4248  two component LuxR family transcriptional regulator  82.33 
 
 		 215 aa  374  1e-103  Burkholderia ambifaria MC40-6  Bacteria  normal  0.206342  normal  1 
 
 
-
 
NC_008391  Bamb_3774  two component LuxR family transcriptional regulator  82.33 
 
 		 215 aa  374  1e-103  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.329832 
 
 
-
 
NC_007511  Bcep18194_B1652  two component LuxR family transcriptional regulator  81.86 
 
 		 215 aa  372  1e-102  Burkholderia sp. 383  Bacteria  normal  0.187578  normal  0.308689 
 
 
-
 
NC_010515  Bcenmc03_5989  two component LuxR family transcriptional regulator  81.4 
 
 		 215 aa  368  1e-101  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008543  Bcen2424_4365  two component LuxR family transcriptional regulator  81.4 
 
 		 215 aa  368  1e-101  Burkholderia cenocepacia HI2424  Bacteria  normal  0.902614  normal  1 
 
 
-
 
NC_009079  BMA10247_A1725  LuxR family DNA-binding response regulator  80.37 
 
 		 215 aa  365  1e-100  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_006349  BMAA0703  LuxR family DNA-binding response regulator  80.37 
 
 		 215 aa  365  1e-100  Burkholderia mallei ATCC 23344  Bacteria  normal  0.533722  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2427  LuxR family DNA-binding response regulator  80.37 
 
 		 282 aa  363  1e-100  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1154  LuxR family DNA-binding response regulator  80.37 
 
 		 215 aa  365  1e-100  Burkholderia pseudomallei 1106a  Bacteria  normal  0.324728  n/a   
 
 
-
 
NC_008835  BMA10229_0760  LuxR family DNA-binding response regulator  80.37 
 
 		 215 aa  365  1e-100  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_008061  Bcen_4002  two component LuxR family transcriptional regulator  80.93 
 
 		 215 aa  366  1e-100  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A1228  LuxR family DNA-binding response regulator  79.91 
 
 		 215 aa  363  1e-100  Burkholderia pseudomallei 668  Bacteria  normal  0.0904383  n/a   
 
 
-
 
NC_010676  Bphyt_6314  two component transcriptional regulator, LuxR family  81.31 
 
 		 216 aa  363  1e-99  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007650  BTH_II1570  LuxR family DNA-binding response regulator  79.44 
 
 		 215 aa  362  2e-99  Burkholderia thailandensis E264  Bacteria  normal  0.17909  n/a   
 
 
-
 
NC_007650  BTH_II1247  LuxR family DNA-binding response regulator  80.47 
 
 		 215 aa  359  1e-98  Burkholderia thailandensis E264  Bacteria  normal  0.32702  n/a   
 
 
-
 
NC_009075  BURPS668_A1634  LuxR family DNA-binding response regulator  79.07 
 
 		 215 aa  355  2.9999999999999997e-97  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1551  LuxR family DNA-binding response regulator  79.07 
 
 		 215 aa  355  2.9999999999999997e-97  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0127  LuxR family DNA-binding response regulator  79.07 
 
 		 215 aa  355  2.9999999999999997e-97  Burkholderia pseudomallei 1710b  Bacteria  normal  0.914848  n/a   
 
 
-
 
NC_007951  Bxe_A1850  two component LuxR family transcriptional regulator  79.34 
 
 		 216 aa  353  1e-96  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010676  Bphyt_5584  two component transcriptional regulator, LuxR family  77.67 
 
 		 215 aa  352  4e-96  Burkholderia phytofirmans PsJN  Bacteria  normal  0.282667  normal  1 
 
 
-
 
NC_010622  Bphy_1137  two component LuxR family transcriptional regulator  75.81 
 
 		 214 aa  346  1e-94  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010625  Bphy_5813  two component LuxR family transcriptional regulator  77.14 
 
 		 215 aa  345  2e-94  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.118405 
 
 
-
 
NC_010625  Bphy_7047  two component LuxR family transcriptional regulator  70.62 
 
 		 215 aa  325  4.0000000000000003e-88  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.976007 
 
 
-
 
NC_007347  Reut_A1216  two component LuxR family transcriptional regulator  62.33 
 
 		 215 aa  285  4e-76  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  62.33 
 
 		 214 aa  273  2.0000000000000002e-72  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_008391  Bamb_5330  two component LuxR family transcriptional regulator  60.58 
 
 		 215 aa  272  3e-72  Burkholderia ambifaria AMMD  Bacteria  normal  0.858277  normal  1 
 
 
-
 
NC_007511  Bcep18194_B2520  two component LuxR family transcriptional regulator  59.43 
 
 		 214 aa  264  7e-70  Burkholderia sp. 383  Bacteria  normal  0.943169  normal  0.310419 
 
 
-
 
NC_008543  Bcen2424_3595  two component LuxR family transcriptional regulator  59.62 
 
 		 215 aa  263  1e-69  Burkholderia cenocepacia HI2424  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010515  Bcenmc03_3925  two component LuxR family transcriptional regulator  59.62 
 
 		 215 aa  263  2e-69  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003295  RSc0192  response regulator transcription regulator protein  59.53 
 
 		 215 aa  254  8e-67  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.028731 
 
 
-
 
NC_012857  Rpic12D_4559  two component transcriptional regulator, LuxR family  59.53 
 
 		 215 aa  252  3e-66  Ralstonia pickettii 12D  Bacteria  normal  0.0669727  normal  0.0839611 
 
 
-
 
NC_010552  BamMC406_3499  two component LuxR family transcriptional regulator  60.2 
 
 		 203 aa  252  3e-66  Burkholderia ambifaria MC40-6  Bacteria  normal  1  hitchhiker  0.00551314 
 
 
-
 
NC_010678  Rpic_4426  two component transcriptional regulator, LuxR family  59.53 
 
 		 215 aa  252  3e-66  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_1400  two component LuxR family transcriptional regulator  50.94 
 
 		 216 aa  228  4e-59  Dechloromonas aromatica RCB  Bacteria  normal  0.973321  normal  0.0605156 
 
 
-
 
NC_008781  Pnap_0790  two component LuxR family transcriptional regulator  51.94 
 
 		 214 aa  221  6e-57  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.870503  normal  0.997505 
 
 
-
 
NC_010524  Lcho_0901  two component LuxR family transcriptional regulator  51.17 
 
 		 235 aa  218  5e-56  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_007435  BURPS1710b_A2347  GerE family regulatory protein  53.33 
 
 		 212 aa  214  5.9999999999999996e-55  Burkholderia pseudomallei 1710b  Bacteria  normal  0.925531  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1047  LuxR family DNA-binding response regulator  53.33 
 
 		 212 aa  214  5.9999999999999996e-55  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_007948  Bpro_4296  two component LuxR family transcriptional regulator  54.76 
 
 		 214 aa  214  5.9999999999999996e-55  Polaromonas sp. JS666  Bacteria  normal  0.891496  normal  1 
 
 
-
 
NC_006349  BMAA0615  LuxR family DNA-binding response regulator  53.33 
 
 		 212 aa  214  7e-55  Burkholderia mallei ATCC 23344  Bacteria  normal  0.26011  n/a   
 
 
-
 
NC_009075  BURPS668_A1132  LuxR family DNA-binding response regulator  53.33 
 
 		 212 aa  214  8e-55  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_0853  LuxR family DNA-binding response regulator  52.86 
 
 		 212 aa  213  1.9999999999999998e-54  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_009079  BMA10247_A1818  LuxR family DNA-binding response regulator  52.86 
 
 		 212 aa  213  1.9999999999999998e-54  Burkholderia mallei NCTC 10247  Bacteria  normal  0.204731  n/a   
 
 
-
 
NC_007948  Bpro_1167  two component LuxR family transcriptional regulator  52.86 
 
 		 213 aa  205  4e-52  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007973  Rmet_0090  two component LuxR family transcriptional regulator  49.05 
 
 		 210 aa  201  7e-51  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007347  Reut_A0121  two component LuxR family transcriptional regulator  49.05 
 
 		 210 aa  200  9.999999999999999e-51  Ralstonia eutropha JMP134  Bacteria  normal  0.830531  n/a   
 
 
-
 
NC_003295  RSc0292  response regulator transcription regulator protein  49.52 
 
 		 210 aa  198  6e-50  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_1572  two component LuxR family transcriptional regulator  46.76 
 
 		 218 aa  198  6e-50  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.972408 
 
 
-
 
NC_012856  Rpic12D_0153  two component transcriptional regulator, LuxR family  49.52 
 
 		 210 aa  196  3e-49  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010682  Rpic_0145  two component transcriptional regulator, LuxR family  49.52 
 
 		 210 aa  195  3e-49  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008781  Pnap_0922  two component LuxR family transcriptional regulator  43.81 
 
 		 210 aa  195  4.0000000000000005e-49  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.114328  normal  1 
 
 
-
 
NC_007650  BTH_II1634  LuxR family DNA-binding response regulator  51.89 
 
 		 214 aa  195  5.000000000000001e-49  Burkholderia thailandensis E264  Bacteria  normal  0.414245  n/a   
 
 
-
 
NC_007948  Bpro_0881  two component LuxR family transcriptional regulator  43.81 
 
 		 210 aa  194  7e-49  Polaromonas sp. JS666  Bacteria  normal  0.464883  normal  0.594453 
 
 
-
 
NC_010627  Bphy_7764  two component LuxR family transcriptional regulator  45.93 
 
 		 210 aa  191  7e-48  Burkholderia phymatum STM815  Bacteria  normal  0.527093  normal  1 
 
 
-
 
NC_012791  Vapar_4108  two component transcriptional regulator, LuxR family  43.81 
 
 		 210 aa  189  2e-47  Variovorax paradoxus S110  Bacteria  normal  0.755468  n/a   
 
 
-
 
NC_007347  Reut_A1146  response regulator receiver  61.39 
 
 		 209 aa  189  2e-47  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_008782  Ajs_3509  two component LuxR family transcriptional regulator  43.81 
 
 		 239 aa  189  2.9999999999999997e-47  Acidovorax sp. JS42  Bacteria  normal  0.325902  normal  1 
 
 
-
 
NC_011992  Dtpsy_2832  two component transcriptional regulator, LuxR family  43.81 
 
 		 210 aa  189  2.9999999999999997e-47  Acidovorax ebreus TPSY  Bacteria  normal  0.988429  n/a   
 
 
-
 
NC_008752  Aave_3862  two component LuxR family transcriptional regulator  42.86 
 
 		 210 aa  188  7e-47  Acidovorax citrulli AAC00-1  Bacteria  normal  0.734244  normal  1 
 
 
-
 
NC_010524  Lcho_1402  two component LuxR family transcriptional regulator  46.41 
 
 		 211 aa  187  1e-46  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_007947  Mfla_0945  two component LuxR family transcriptional regulator  41.63 
 
 		 210 aa  187  1e-46  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007947  Mfla_1089  two component LuxR family transcriptional regulator  41.63 
 
 		 210 aa  187  1e-46  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010625  Bphy_6558  two component LuxR family transcriptional regulator  44.02 
 
 		 210 aa  187  1e-46  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.458284 
 
 
-
 
NC_007404  Tbd_1588  two component LuxR family transcriptional regulator  42.31 
 
 		 215 aa  186  3e-46  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.731747  normal  0.987016 
 
 
-
 
NC_007517  Gmet_2158  two component LuxR family transcriptional regulator  42.11 
 
 		 210 aa  184  6e-46  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  0.0301144 
 
 
-
 
NC_007614  Nmul_A1336  two component LuxR family transcriptional regulator  43.96 
 
 		 208 aa  184  1.0000000000000001e-45  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_1809  two component LuxR family transcriptional regulator  41.9 
 
 		 210 aa  182  2.0000000000000003e-45  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A0581  two component LuxR family transcriptional regulator  42.31 
 
 		 210 aa  182  3e-45  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008786  Veis_0032  two component LuxR family transcriptional regulator  42.38 
 
 		 210 aa  182  4.0000000000000006e-45  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.245451  normal  1 
 
 
-
 
NC_007951  Bxe_A1460  two component LuxR family transcriptional regulator  42.38 
 
 		 210 aa  181  8.000000000000001e-45  Burkholderia xenovorans LB400  Bacteria  normal  0.39219  normal  0.352919 
 
 
-
 
NC_007614  Nmul_A1235  two component LuxR family transcriptional regulator  40.95 
 
 		 211 aa  181  1e-44  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_010676  Bphyt_6235  two component transcriptional regulator, LuxR family  42.79 
 
 		 210 aa  180  1e-44  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  0.612124 
 
 
-
 
NC_010681  Bphyt_2656  two component transcriptional regulator, LuxR family  41.43 
 
 		 210 aa  179  2.9999999999999997e-44  Burkholderia phytofirmans PsJN  Bacteria  normal  0.756738  normal  0.520546 
 
 
-
 
NC_010622  Bphy_1508  two component LuxR family transcriptional regulator  42.06 
 
 		 236 aa  178  4.999999999999999e-44  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010551  BamMC406_2966  two component LuxR family transcriptional regulator  41.15 
 
 		 218 aa  177  1e-43  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  0.288922 
 
 
-
 
NC_008390  Bamb_3100  two component LuxR family transcriptional regulator  41.55 
 
 		 218 aa  177  1e-43  Burkholderia ambifaria AMMD  Bacteria  normal  0.650822  n/a   
 
 
-
 
NC_009656  PSPA7_0745  putative two-component response regulator  43.6 
 
 		 210 aa  176  2e-43  Pseudomonas aeruginosa PA7  Bacteria  normal  0.536324  n/a   
 
 
-
 
NC_007947  Mfla_1987  two component LuxR family transcriptional regulator  42.72 
 
 		 215 aa  176  2e-43  Methylobacillus flagellatus KT  Bacteria  normal  0.0949899  normal  1 
 
 
-
 
NC_008463  PA14_07840  putative two-component response regulator  43.13 
 
 		 210 aa  176  2e-43  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.0171986 
 
 
-
 
NC_010524  Lcho_1595  two component LuxR family transcriptional regulator  40.67 
 
 		 209 aa  175  5e-43  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00167261 
 
 
-
 
NC_008836  BMA10229_A2133  LuxR family DNA-binding response regulator  39.23 
 
 		 218 aa  174  6e-43  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_009074  BURPS668_0231  LuxR family DNA-binding response regulator  39.23 
 
 		 218 aa  174  6e-43  Burkholderia pseudomallei 668  Bacteria  normal  0.214964  n/a   
 
 
-
 
NC_007434  BURPS1710b_0425  LuxR family DNA-binding response regulator  39.23 
 
 		 218 aa  174  6e-43  Burkholderia pseudomallei 1710b  Bacteria  normal  0.0536791  n/a   
 
 
-
 
NC_007651  BTH_I0209  LuxR family DNA-binding response regulator  40.19 
 
 		 218 aa  174  6e-43  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_009080  BMA10247_3391  LuxR family DNA-binding response regulator  39.23 
 
 		 218 aa  174  6e-43  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2955  LuxR family DNA-binding response regulator  39.23 
 
 		 218 aa  174  6e-43  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009076  BURPS1106A_0243  LuxR family DNA-binding response regulator  39.23 
 
 		 218 aa  174  6e-43  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_010622  Bphy_0097  two component LuxR family transcriptional regulator  42.11 
 
 		 218 aa  174  9e-43  Burkholderia phymatum STM815  Bacteria  normal  0.605108  normal  1 
 
 
-
 
NC_007760  Adeh_1762  two component LuxR family transcriptional regulator  44.23 
 
 		 210 aa  174  9.999999999999999e-43  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_2172  two component transcriptional regulator, LuxR family  44.23 
 
 		 210 aa  174  9.999999999999999e-43  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_006348  BMA3290  LuxR family DNA-binding response regulator  39.23 
 
 		 455 aa  173  1.9999999999999998e-42  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A3494  two component LuxR family transcriptional regulator  40.18 
 
 		 226 aa  173  1.9999999999999998e-42  Methylibium petroleiphilum PM1  Bacteria  normal  0.514045  normal  1 
 
 
-
 
NC_007404  Tbd_1290  two component LuxR family transcriptional regulator  45.67 
 
 		 209 aa  173  1.9999999999999998e-42  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.542915  normal  1 
 
 
-
 
NC_011145  AnaeK_2078  two component transcriptional regulator, LuxR family  43.75 
 
 		 210 aa  172  2.9999999999999996e-42  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_007510  Bcep18194_A6403  two component LuxR family transcriptional regulator  39.23 
 
 		 271 aa  172  5e-42  Burkholderia sp. 383  Bacteria  normal  1  normal  0.285313 
 
 
-
 
NC_007951  Bxe_A4347  two component LuxR family transcriptional regulator  40.67 
 
 		 218 aa  171  5.999999999999999e-42  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.705126 
 
 
-
 
NC_008752  Aave_4382  two component LuxR family transcriptional regulator  39.71 
 
 		 209 aa  171  5.999999999999999e-42  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  1 
 
 
-
 
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