185 homologs were found in PanDaTox collection
for query gene BamMC406_1039 on replicon NC_010551
Organism: Burkholderia ambifaria MC40-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010551  BamMC406_1039  HAD family hydrolase  100 
 
 
250 aa  496  1e-139  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.234705 
 
 
-
 
NC_008390  Bamb_1035  HAD family hydrolase  100 
 
 
250 aa  496  1e-139  Burkholderia ambifaria AMMD  Bacteria  normal  0.28485  n/a   
 
 
-
 
NC_010084  Bmul_2148  HAD family hydrolase  93.6 
 
 
250 aa  466  9.999999999999999e-131  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.524754  normal  0.803634 
 
 
-
 
NC_008060  Bcen_0678  HAD family hydrolase  93.12 
 
 
250 aa  459  9.999999999999999e-129  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1157  HAD family hydrolase  93.12 
 
 
250 aa  459  9.999999999999999e-129  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_1133  HAD family hydrolase  93.52 
 
 
250 aa  460  9.999999999999999e-129  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.697962  normal 
 
 
-
 
NC_007510  Bcep18194_A4269  HAD family hydrolase  92.4 
 
 
250 aa  440  9.999999999999999e-123  Burkholderia sp. 383  Bacteria  normal  0.582596  normal 
 
 
-
 
NC_007434  BURPS1710b_2873  trehalose-phosphatase  79.18 
 
 
269 aa  397  9.999999999999999e-111  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_2755  trehalose-phosphatase  79.59 
 
 
250 aa  399  9.999999999999999e-111  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_2815  trehalose-phosphatase  79.59 
 
 
269 aa  400  9.999999999999999e-111  Burkholderia pseudomallei 1106a  Bacteria  normal  0.622128  n/a   
 
 
-
 
NC_006348  BMA0565  trehalose-phosphatase  78.63 
 
 
250 aa  393  1e-108  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1752  trehalose-phosphatase  78.78 
 
 
269 aa  394  1e-108  Burkholderia thailandensis E264  Bacteria  normal  0.502389  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2443  trehalose-phosphatase  79.01 
 
 
269 aa  393  1e-108  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2838  trehalose-phosphatase  78.6 
 
 
269 aa  392  1e-108  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1766  trehalose-phosphatase  78.6 
 
 
269 aa  392  1e-108  Burkholderia mallei NCTC 10247  Bacteria  normal  0.869594  n/a   
 
 
-
 
NC_010622  Bphy_0858  HAD family hydrolase  73.47 
 
 
249 aa  364  1e-100  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1241  trehalose-phosphatase  77.87 
 
 
269 aa  365  1e-100  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.660532 
 
 
-
 
NC_010681  Bphyt_2881  HAD-superfamily hydrolase, subfamily IIB  77.02 
 
 
249 aa  365  1e-100  Burkholderia phytofirmans PsJN  Bacteria  normal  0.941751  normal  0.303485 
 
 
-
 
NC_011094  SeSA_A2084  trehalose-6-phosphate phosphatase  51.29 
 
 
267 aa  222  4.9999999999999996e-57  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  decreased coverage  0.00000038729 
 
 
-
 
NC_011149  SeAg_B1192  trehalose-6-phosphate phosphatase  51.29 
 
 
267 aa  222  4.9999999999999996e-57  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0385868  n/a   
 
 
-
 
NC_011205  SeD_A1315  trehalose-6-phosphate phosphatase  51.29 
 
 
267 aa  221  6e-57  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  6.89318e-19 
 
 
-
 
NC_011080  SNSL254_A2090  trehalose-6-phosphate phosphatase  51.29 
 
 
267 aa  221  6e-57  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.591439  hitchhiker  4.88107e-23 
 
 
-
 
NC_011083  SeHA_C2145  trehalose-6-phosphate phosphatase  50.86 
 
 
267 aa  220  1.9999999999999999e-56  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  hitchhiker  1.55592e-22 
 
 
-
 
NC_010678  Rpic_4231  HAD-superfamily hydrolase, subfamily IIB  48.79 
 
 
266 aa  217  1e-55  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4341  trehalose-phosphatase  48.79 
 
 
266 aa  217  1e-55  Ralstonia pickettii 12D  Bacteria  normal  0.793303  normal  0.173439 
 
 
-
 
NC_012791  Vapar_0987  trehalose-phosphatase  54.08 
 
 
258 aa  213  1.9999999999999998e-54  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_42400  trehalose-phosphatase  47.95 
 
 
253 aa  213  2.9999999999999995e-54  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2473  trehalose-6-phosphate phosphatase  46.47 
 
 
268 aa  213  2.9999999999999995e-54  Enterobacter sp. 638  Bacteria  normal  0.020525  normal 
 
 
-
 
NC_003296  RSp1104  trehalose-phosphatase protein  49.16 
 
 
262 aa  209  3e-53  Ralstonia solanacearum GMI1000  Bacteria  normal  0.387228  normal  0.386003 
 
 
-
 
NC_011353  ECH74115_2634  trehalose-6-phosphate phosphatase  50.23 
 
 
266 aa  209  5e-53  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.130078  hitchhiker  0.0000000000001334 
 
 
-
 
CP001509  ECD_01866  trehalose-6-phosphate phosphatase, biosynthetic  50.23 
 
 
266 aa  208  7e-53  Escherichia coli BL21(DE3)  Bacteria  normal  0.298594  n/a   
 
 
-
 
CP001637  EcDH1_1745  HAD-superfamily hydrolase, subfamily IIB  50.23 
 
 
266 aa  208  7e-53  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1737  trehalose-6-phosphate phosphatase  50.23 
 
 
266 aa  208  7e-53  Escherichia coli ATCC 8739  Bacteria  normal  0.758934  normal 
 
 
-
 
NC_010498  EcSMS35_1288  trehalose-6-phosphate phosphatase  50.23 
 
 
266 aa  208  7e-53  Escherichia coli SMS-3-5  Bacteria  normal  0.0241592  hitchhiker  0.000000179042 
 
 
-
 
NC_012892  B21_01855  hypothetical protein  50.23 
 
 
266 aa  208  7e-53  Escherichia coli BL21  Bacteria  normal  0.361585  n/a   
 
 
-
 
NC_009800  EcHS_A1994  trehalose-6-phosphate phosphatase  50.23 
 
 
266 aa  208  7e-53  Escherichia coli HS  Bacteria  hitchhiker  0.000553553  n/a   
 
 
-
 
NC_009801  EcE24377A_2129  trehalose-6-phosphate phosphatase  50.23 
 
 
266 aa  208  7e-53  Escherichia coli E24377A  Bacteria  hitchhiker  0.000674264  n/a   
 
 
-
 
NC_010658  SbBS512_E1022  trehalose-6-phosphate phosphatase  50.23 
 
 
265 aa  203  2e-51  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_3915  HAD family hydrolase  49.15 
 
 
260 aa  196  2.0000000000000003e-49  Polaromonas sp. JS666  Bacteria  normal  normal  0.240157 
 
 
-
 
NC_010002  Daci_5869  HAD family hydrolase  47.76 
 
 
272 aa  189  2.9999999999999997e-47  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.967435 
 
 
-
 
NC_007493  RSP_0949  putative trehalose-6-phosphate phosphatase  49.58 
 
 
260 aa  187  1e-46  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_0526  HAD family hydrolase  47.74 
 
 
259 aa  187  1e-46  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.301013 
 
 
-
 
NC_007347  Reut_A0414  trehalose-phosphatase  48.95 
 
 
265 aa  186  2e-46  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_2609  HAD family hydrolase  48.73 
 
 
260 aa  184  1.0000000000000001e-45  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_5910  HAD family hydrolase  46.01 
 
 
265 aa  182  6e-45  Sinorhizobium medicae WSM419  Bacteria  normal  0.754111  normal  0.241767 
 
 
-
 
NC_009428  Rsph17025_2945  HAD family hydrolase  46.75 
 
 
260 aa  178  5.999999999999999e-44  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.18018 
 
 
-
 
NC_008340  Mlg_0005  HAD family hydrolase  46.12 
 
 
257 aa  175  5e-43  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.769052 
 
 
-
 
NC_008786  Veis_1468  HAD family hydrolase  45.34 
 
 
245 aa  175  6e-43  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.960861 
 
 
-
 
NC_010725  Mpop_4909  HAD-superfamily hydrolase, subfamily IIB  46.35 
 
 
251 aa  175  6e-43  Methylobacterium populi BJ001  Bacteria  normal  0.379995  normal  0.389107 
 
 
-
 
NC_008782  Ajs_0503  HAD family hydrolase  42.26 
 
 
243 aa  172  2.9999999999999996e-42  Acidovorax sp. JS42  Bacteria  normal  0.874755  normal  0.0247471 
 
 
-
 
NC_011992  Dtpsy_0519  trehalose-phosphatase  42.26 
 
 
243 aa  172  2.9999999999999996e-42  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A3792  trehalose-phosphatase  46.88 
 
 
254 aa  171  7.999999999999999e-42  Methylibium petroleiphilum PM1  Bacteria  normal  0.299059  hitchhiker  0.000919174 
 
 
-
 
NC_008254  Meso_1529  HAD family hydrolase  41.18 
 
 
258 aa  171  9e-42  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_1976  HAD family hydrolase  42.02 
 
 
261 aa  170  2e-41  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.7461 
 
 
-
 
NC_007973  Rmet_0355  HAD family hydrolase  45.23 
 
 
272 aa  170  2e-41  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_4400  HAD family hydrolase  44.92 
 
 
251 aa  168  7e-41  Methylobacterium extorquens PA1  Bacteria  normal  0.43196  normal 
 
 
-
 
NC_011894  Mnod_0220  HAD-superfamily hydrolase, subfamily IIB  44.81 
 
 
250 aa  167  1e-40  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.740885  n/a   
 
 
-
 
NC_011757  Mchl_4863  HAD-superfamily hydrolase, subfamily IIB  44.92 
 
 
251 aa  167  1e-40  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0256801 
 
 
-
 
NC_011365  Gdia_1107  HAD-superfamily hydrolase, subfamily IIB  45.71 
 
 
252 aa  166  4e-40  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.173733  normal  0.0523288 
 
 
-
 
NC_009719  Plav_0306  HAD family hydrolase  46.4 
 
 
253 aa  164  1.0000000000000001e-39  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_4595  HAD-superfamily hydrolase, subfamily IIB  45 
 
 
252 aa  164  2.0000000000000002e-39  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012854  Rleg_6319  HAD-superfamily hydrolase, subfamily IIB  44.55 
 
 
252 aa  163  2.0000000000000002e-39  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.777067  normal 
 
 
-
 
NC_008752  Aave_4210  HAD family hydrolase  45.69 
 
 
245 aa  162  4.0000000000000004e-39  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.418439 
 
 
-
 
NC_011989  Avi_0371  Trehalose-6-phosphatase protein  45.49 
 
 
266 aa  162  5.0000000000000005e-39  Agrobacterium vitis S4  Bacteria  normal  0.501795  n/a   
 
 
-
 
NC_010505  Mrad2831_5493  HAD family hydrolase  43.75 
 
 
247 aa  161  9e-39  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_0236  HAD family hydrolase  42.8 
 
 
248 aa  158  8e-38  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0577  trehalose-phosphatase (trehalose 6-phosphate phosphatase) (TPP)  40.16 
 
 
277 aa  154  2e-36  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_04867  trehalose-phosphatase  39.39 
 
 
240 aa  152  5.9999999999999996e-36  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_1722  HAD family hydrolase  44.71 
 
 
275 aa  148  7e-35  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.283402 
 
 
-
 
NC_010511  M446_3162  HAD family hydrolase  46.03 
 
 
250 aa  148  8e-35  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.248638 
 
 
-
 
NC_007925  RPC_4524  HAD family hydrolase  39.27 
 
 
278 aa  147  2.0000000000000003e-34  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.278417 
 
 
-
 
NC_011071  Smal_3153  HAD-superfamily hydrolase, subfamily IIB  39.39 
 
 
252 aa  147  2.0000000000000003e-34  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_3026  trehalose-phosphatase  37.3 
 
 
269 aa  145  6e-34  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0916  trehalose-6-phosphatase  39.51 
 
 
268 aa  144  1e-33  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.184398  normal  0.382992 
 
 
-
 
NC_007958  RPD_1027  HAD family hydrolase  38.8 
 
 
269 aa  144  1e-33  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.794711  normal 
 
 
-
 
NC_007964  Nham_3613  HAD family hydrolase  37.14 
 
 
269 aa  143  2e-33  Nitrobacter hamburgensis X14  Bacteria  normal  0.574242  n/a   
 
 
-
 
NC_011004  Rpal_5142  HAD-superfamily hydrolase, subfamily IIB  42.27 
 
 
265 aa  143  2e-33  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_2714  HAD family hydrolase  40.59 
 
 
260 aa  142  8e-33  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_0200  HAD-superfamily hydrolase, subfamily IIB  40.08 
 
 
257 aa  140  1.9999999999999998e-32  Methylocella silvestris BL2  Bacteria  n/a    normal  0.673335 
 
 
-
 
NC_007802  Jann_2062  HAD family hydrolase  36.52 
 
 
245 aa  134  1.9999999999999998e-30  Jannaschia sp. CCS1  Bacteria  normal  0.20898  normal  0.837706 
 
 
-
 
NC_008347  Mmar10_1019  HAD family hydrolase  38.62 
 
 
254 aa  129  3e-29  Maricaulis maris MCS10  Bacteria  normal  0.07517  normal  0.48063 
 
 
-
 
NC_013501  Rmar_0981  trehalose-phosphatase  38.46 
 
 
238 aa  129  6e-29  Rhodothermus marinus DSM 4252  Bacteria  normal  0.977565  n/a   
 
 
-
 
NC_009511  Swit_3608  HAD family hydrolase  36.65 
 
 
251 aa  128  9.000000000000001e-29  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.103192 
 
 
-
 
NC_009484  Acry_0866  HAD family hydrolase  39.61 
 
 
236 aa  128  1.0000000000000001e-28  Acidiphilium cryptum JF-5  Bacteria  normal  0.565084  n/a   
 
 
-
 
NC_010338  Caul_1771  HAD family hydrolase  43.05 
 
 
262 aa  127  1.0000000000000001e-28  Caulobacter sp. K31  Bacteria  normal  normal  0.165933 
 
 
-
 
NC_008025  Dgeo_0060  HAD family hydrolase  37.66 
 
 
238 aa  118  9.999999999999999e-26  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2717  trehalose-phosphatase  37.24 
 
 
229 aa  117  1.9999999999999998e-25  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_1503  HAD family hydrolase  35.83 
 
 
236 aa  112  5e-24  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1656  HAD family hydrolase  36.19 
 
 
261 aa  105  6e-22  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.475488  n/a   
 
 
-
 
NC_007969  Pcryo_1803  HAD family hydrolase  34.35 
 
 
293 aa  105  1e-21  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.0790667 
 
 
-
 
NC_007644  Moth_1368  trehalose-phosphatase  37.67 
 
 
253 aa  104  2e-21  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_0650  trehalose-phosphatase  34.75 
 
 
249 aa  102  4e-21  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8924  trehalose-6-phosphatase  35.29 
 
 
257 aa  97.1  2e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  0.568468  normal 
 
 
-
 
NC_008701  Pisl_1339  putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB  37.13 
 
 
737 aa  96.7  3e-19  Pyrobaculum islandicum DSM 4184  Archaea  normal  normal 
 
 
-
 
NC_009565  TBFG_13408  trehalose 6-phosphate phosphatase otsB2  35.41 
 
 
391 aa  95.1  8e-19  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_010525  Tneu_0273  putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB  35.44 
 
 
737 aa  94.7  1e-18  Thermoproteus neutrophilus V24Sta  Archaea  normal  normal 
 
 
-
 
NC_009338  Mflv_4989  HAD family hydrolase  33.72 
 
 
1186 aa  89  7e-17  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.294557  normal 
 
 
-
 
NC_008789  Hhal_0345  HAD family hydrolase  33.47 
 
 
265 aa  88.6  9e-17  Halorhodospira halophila SL1  Bacteria  normal  0.0522927  n/a   
 
 
-
 
NC_013235  Namu_4915  trehalose-phosphatase  32.41 
 
 
744 aa  86.7  3e-16  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_35060  trehalose 6-phosphatase  32.65 
 
 
844 aa  83.2  0.000000000000004  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.746667 
 
 
-
 
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