22 homologs were found in PanDaTox collection
for query gene BR1587 on replicon NC_004310
Organism: Brucella suis 1330



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004310  BR1587  hypothetical protein  100 
 
 
101 aa  211  2e-54  Brucella suis 1330  Bacteria  decreased coverage  1.95235e-05  n/a   
 
 
-
 
NC_009667  Oant_1581  pyridoxamine 5'-phosphate oxidase-related FMN-binding  46.81 
 
 
245 aa  86.3  1e-16  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0647071  n/a   
 
 
-
 
NC_011369  Rleg2_2826  pyridoxamine 5'-phosphate oxidase-related FMN-binding  47.54 
 
 
249 aa  58.9  2e-08  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.171612  normal  0.204589 
 
 
-
 
NC_012850  Rleg_3095  pyridoxamine 5'-phosphate oxidase-related FMN-binding  44.26 
 
 
249 aa  55.1  3e-07  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3613  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  35.29 
 
 
184 aa  54.3  5e-07  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2308  pyridoxamine 5'-phosphate oxidase-related FMN-binding  45.9 
 
 
247 aa  53.1  1e-06  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.547637 
 
 
-
 
NC_008254  Meso_2207  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  38.55 
 
 
251 aa  52.8  2e-06  Chelativorans sp. BNC1  Bacteria  normal  0.359427  n/a   
 
 
-
 
NC_009719  Plav_3592  pyridoxamine 5'-phosphate oxidase-related FMN-binding  34.92 
 
 
255 aa  49.7  1e-05  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_3284  hypothetical protein  33.33 
 
 
243 aa  48.1  4e-05  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_2234  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32.5 
 
 
164 aa  47.4  7e-05  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.957515 
 
 
-
 
NC_011894  Mnod_5432  pyridoxamine 5'-phosphate oxidase-related FMN-binding  33.75 
 
 
260 aa  45.1  0.0003  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.932188  n/a   
 
 
-
 
NC_011757  Mchl_1401  pyridoxamine 5'-phosphate oxidase-related FMN-binding  46.51 
 
 
271 aa  45.1  0.0003  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.509564  normal  0.321093 
 
 
-
 
NC_010725  Mpop_1180  pyridoxamine 5'-phosphate oxidase-related FMN-binding  42.31 
 
 
270 aa  45.1  0.0003  Methylobacterium populi BJ001  Bacteria  normal  normal  0.171584 
 
 
-
 
NC_010511  M446_0224  pyridoxamine 5'-phosphate oxidase-related FMN-binding  33.75 
 
 
260 aa  45.1  0.0003  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.011733 
 
 
-
 
NC_009952  Dshi_2212  hypothetical protein  35.8 
 
 
164 aa  45.1  0.0003  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0462  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  35.59 
 
 
244 aa  44.3  0.0005  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.45404 
 
 
-
 
NC_009428  Rsph17025_0512  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  34.94 
 
 
165 aa  43.9  0.0008  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.0680495 
 
 
-
 
NC_010505  Mrad2831_3090  pyridoxamine 5'-phosphate oxidase-related FMN-binding  43.48 
 
 
261 aa  43.1  0.001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.853398  normal 
 
 
-
 
NC_007493  RSP_0581  hypothetical protein  31.25 
 
 
164 aa  43.5  0.001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_1374  pyridoxamine 5'-phosphate oxidase-related FMN-binding  47.62 
 
 
256 aa  43.5  0.001  Methylocella silvestris BL2  Bacteria  n/a    normal  0.694327 
 
 
-
 
NC_010172  Mext_1239  pyridoxamine 5'-phosphate oxidase-related FMN-binding  44.19 
 
 
271 aa  42  0.003  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_2742  pyridoxamine 5'-phosphate oxidase-related FMN-binding  34.43 
 
 
260 aa  40.8  0.006  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.615645 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>