More than 300 homologs were found in PanDaTox collection
for query gene BMA10247_A0520 on replicon NC_009079
Organism: Burkholderia mallei NCTC 10247



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012856  Rpic12D_1821  isopropylmalate isomerase large subunit  86.11 
 
 
469 aa  846    Ralstonia pickettii 12D  Bacteria  normal  0.626663  normal  0.539563 
 
 
-
 
NC_011901  Tgr7_1245  isopropylmalate isomerase large subunit  76.82 
 
 
470 aa  732    Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.923179  n/a   
 
 
-
 
NC_002947  PP_1985  isopropylmalate isomerase large subunit  72.13 
 
 
477 aa  698    Pseudomonas putida KT2440  Bacteria  normal  0.682408  normal  0.0241842 
 
 
-
 
NC_010552  BamMC406_3844  isopropylmalate isomerase large subunit  94.88 
 
 
469 aa  919    Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.777096 
 
 
-
 
NC_002977  MCA2065  isopropylmalate isomerase large subunit  75.59 
 
 
470 aa  723    Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc1990  isopropylmalate isomerase large subunit  85.07 
 
 
469 aa  838    Ralstonia solanacearum GMI1000  Bacteria  normal  0.508129  normal  0.146532 
 
 
-
 
NC_010676  Bphyt_6850  isopropylmalate isomerase large subunit  92.32 
 
 
469 aa  900    Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.670748 
 
 
-
 
NC_010717  PXO_02613  isopropylmalate isomerase large subunit  71.25 
 
 
482 aa  689    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2582  isopropylmalate isomerase large subunit  74.79 
 
 
473 aa  716    Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR1906  isopropylmalate isomerase large subunit  69.03 
 
 
469 aa  643    Brucella suis 1330  Bacteria  normal  0.276241  n/a   
 
 
-
 
NC_010513  Xfasm12_1542  isopropylmalate isomerase large subunit  72.4 
 
 
474 aa  704    Xylella fastidiosa M12  Bacteria  normal  0.690084  n/a   
 
 
-
 
NC_004578  PSPTO_2173  3-isopropylmalate dehydratase, large subunit  72.13 
 
 
475 aa  697    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_1381  3-isopropylmalate dehydratase, large subunit  67.02 
 
 
480 aa  649    Ralstonia pickettii 12J  Bacteria  normal  0.8068  normal  0.283608 
 
 
-
 
NC_013422  Hneap_1719  3-isopropylmalate dehydratase, large subunit  71.89 
 
 
468 aa  669    Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0520  isopropylmalate isomerase large subunit  100 
 
 
469 aa  971    Burkholderia mallei NCTC 10247  Bacteria  normal  0.643053  n/a   
 
 
-
 
NC_006349  BMAA1729  isopropylmalate isomerase large subunit  100 
 
 
469 aa  971    Burkholderia mallei ATCC 23344  Bacteria  normal  0.405505  n/a   
 
 
-
 
NC_010577  XfasM23_1485  isopropylmalate isomerase large subunit  72.61 
 
 
474 aa  707    Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1983  isopropylmalate isomerase large subunit  72.77 
 
 
474 aa  698    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0478435 
 
 
-
 
NC_007204  Psyc_1413  isopropylmalate isomerase large subunit  66.24 
 
 
472 aa  640    Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.634332 
 
 
-
 
NC_007298  Daro_0861  isopropylmalate isomerase large subunit  73.88 
 
 
468 aa  667    Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.00000139037  hitchhiker  0.0000137935 
 
 
-
 
NC_010515  Bcenmc03_3579  isopropylmalate isomerase large subunit  95.52 
 
 
469 aa  924    Burkholderia cenocepacia MC0-3  Bacteria  normal  0.482085  normal  0.399315 
 
 
-
 
NC_007347  Reut_A2314  isopropylmalate isomerase large subunit  84.65 
 
 
469 aa  830    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1922  isopropylmalate isomerase large subunit  76.61 
 
 
467 aa  727    Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_2785  isopropylmalate isomerase large subunit  68.9 
 
 
468 aa  642    Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.378068  normal 
 
 
-
 
NC_009439  Pmen_2723  isopropylmalate isomerase large subunit  70.06 
 
 
475 aa  679    Pseudomonas mendocina ymp  Bacteria  decreased coverage  0.00243563  normal  0.0720472 
 
 
-
 
NC_007435  BURPS1710b_A0778  isopropylmalate isomerase large subunit  99.79 
 
 
479 aa  969    Burkholderia pseudomallei 1710b  Bacteria  hitchhiker  0.000809283  n/a   
 
 
-
 
NC_007484  Noc_2935  isopropylmalate isomerase large subunit  74.46 
 
 
469 aa  714    Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_1889  isopropylmalate isomerase large subunit  72.55 
 
 
472 aa  701    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.169279  normal 
 
 
-
 
NC_009484  Acry_2149  isopropylmalate isomerase large subunit  68.38 
 
 
466 aa  664    Acidiphilium cryptum JF-5  Bacteria  normal  0.754808  n/a   
 
 
-
 
NC_013889  TK90_1343  3-isopropylmalate dehydratase, large subunit  72.94 
 
 
470 aa  695    Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.444862 
 
 
-
 
NC_008789  Hhal_1812  isopropylmalate isomerase large subunit  73.06 
 
 
466 aa  699    Halorhodospira halophila SL1  Bacteria  normal  0.364535  n/a   
 
 
-
 
NC_007511  Bcep18194_B2133  isopropylmalate isomerase large subunit  95.31 
 
 
469 aa  922    Burkholderia sp. 383  Bacteria  normal  normal  0.0241304 
 
 
-
 
NC_008835  BMA10229_1849  isopropylmalate isomerase large subunit  100 
 
 
469 aa  971    Burkholderia mallei NCTC 10229  Bacteria  normal  0.0604506  n/a   
 
 
-
 
NC_010682  Rpic_2145  isopropylmalate isomerase large subunit  85.04 
 
 
469 aa  837    Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_0795  isopropylmalate isomerase large subunit  69.3 
 
 
474 aa  675    Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_4630  isopropylmalate isomerase large subunit  95.95 
 
 
477 aa  927    Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3229  isopropylmalate isomerase large subunit  75 
 
 
473 aa  718    Acidovorax sp. JS42  Bacteria  normal  0.0550685  normal 
 
 
-
 
NC_007614  Nmul_A1921  isopropylmalate isomerase large subunit  75.48 
 
 
469 aa  729    Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.724454  n/a   
 
 
-
 
NC_007643  Rru_A1189  isopropylmalate isomerase large subunit  67.81 
 
 
472 aa  669    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.672672  n/a   
 
 
-
 
NC_007650  BTH_II0672  isopropylmalate isomerase large subunit  98.72 
 
 
469 aa  963    Burkholderia thailandensis E264  Bacteria  hitchhiker  0.00206744  n/a   
 
 
-
 
NC_010531  Pnec_1057  isopropylmalate isomerase large subunit  79.27 
 
 
469 aa  782    Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  0.960077  normal  0.219462 
 
 
-
 
NC_009524  PsycPRwf_1936  isopropylmalate isomerase large subunit  69.49 
 
 
478 aa  679    Psychrobacter sp. PRwf-1  Bacteria  normal  0.962808  normal 
 
 
-
 
NC_007778  RPB_0348  isopropylmalate isomerase large subunit  69.33 
 
 
470 aa  639    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1423  3-isopropylmalate dehydratase, large subunit  68.09 
 
 
473 aa  676    Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_009078  BURPS1106A_A2316  isopropylmalate isomerase large subunit  99.79 
 
 
469 aa  969    Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1795  isopropylmalate isomerase large subunit  73.7 
 
 
490 aa  717    Rhodoferax ferrireducens T118  Bacteria  normal  0.367399  n/a   
 
 
-
 
NC_007912  Sde_2086  isopropylmalate isomerase large subunit  68.58 
 
 
472 aa  660    Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1705  isopropylmalate isomerase large subunit  76.23 
 
 
468 aa  749    Methylobacillus flagellatus KT  Bacteria  normal  0.0785429  hitchhiker  0.00273209 
 
 
-
 
NC_007948  Bpro_3608  isopropylmalate isomerase large subunit  74.36 
 
 
473 aa  723    Polaromonas sp. JS666  Bacteria  normal  normal  0.629555 
 
 
-
 
NC_008786  Veis_1049  isopropylmalate isomerase large subunit  72.98 
 
 
502 aa  700    Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2889  isopropylmalate isomerase large subunit  92.11 
 
 
469 aa  900    Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4367  isopropylmalate isomerase large subunit  94.24 
 
 
469 aa  909    Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0504  isopropylmalate isomerase large subunit  69.98 
 
 
470 aa  642    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2453  isopropylmalate isomerase large subunit  70.13 
 
 
487 aa  671    Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.142412  n/a   
 
 
-
 
NC_007969  Pcryo_1574  isopropylmalate isomerase large subunit  66.24 
 
 
472 aa  642    Psychrobacter cryohalolentis K5  Bacteria  normal  0.578069  normal 
 
 
-
 
NC_007973  Rmet_2475  isopropylmalate isomerase large subunit  83.8 
 
 
469 aa  827    Cupriavidus metallidurans CH34  Bacteria  normal  0.891959  normal  0.311686 
 
 
-
 
NC_007974  Rmet_4273  isopropylmalate isomerase large subunit  69.26 
 
 
477 aa  664    Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_1422  isopropylmalate isomerase large subunit  75.64 
 
 
473 aa  727    Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_34280  isopropylmalate isomerase large subunit  72.34 
 
 
474 aa  697    Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_3059  isopropylmalate isomerase large subunit  68.6 
 
 
469 aa  636    Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_4418  isopropylmalate isomerase large subunit  95.52 
 
 
469 aa  924    Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1675  isopropylmalate isomerase large subunit  75.74 
 
 
474 aa  731    Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009654  Mmwyl1_2091  3-isopropylmalate dehydratase, large subunit  69 
 
 
475 aa  638    Marinomonas sp. MWYL1  Bacteria  normal  0.0250887  normal 
 
 
-
 
NC_008781  Pnap_3039  isopropylmalate isomerase large subunit  71.99 
 
 
483 aa  701    Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1548  isopropylmalate isomerase large subunit  71.7 
 
 
477 aa  695    Pseudomonas putida W619  Bacteria  normal  normal  0.272021 
 
 
-
 
NC_011004  Rpal_0240  isopropylmalate isomerase large subunit  68.9 
 
 
469 aa  636    Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_0624  isopropylmalate isomerase large subunit  71.4 
 
 
470 aa  681    Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1228  isopropylmalate isomerase large subunit  73.55 
 
 
469 aa  707    Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.0896395 
 
 
-
 
NC_010002  Daci_5235  isopropylmalate isomerase large subunit  73.73 
 
 
488 aa  712    Delftia acidovorans SPH-1  Bacteria  normal  normal  0.71536 
 
 
-
 
NC_009379  Pnuc_0764  isopropylmalate isomerase large subunit  79.49 
 
 
469 aa  787    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_3340  isopropylmalate isomerase large subunit  94.88 
 
 
469 aa  919    Burkholderia ambifaria AMMD  Bacteria  normal  0.184073  normal  0.862322 
 
 
-
 
NC_008463  PA14_23750  isopropylmalate isomerase large subunit  71.97 
 
 
474 aa  701    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.0168844 
 
 
-
 
NC_008784  BMASAVP1_1641  isopropylmalate isomerase large subunit  100 
 
 
469 aa  971    Burkholderia mallei SAVP1  Bacteria  normal  0.159625  n/a   
 
 
-
 
NC_008825  Mpe_A2164  isopropylmalate isomerase large subunit  80.98 
 
 
479 aa  794    Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.170701 
 
 
-
 
NC_009075  BURPS668_A2454  isopropylmalate isomerase large subunit  99.79 
 
 
469 aa  969    Burkholderia pseudomallei 668  Bacteria  normal  0.0296584  n/a   
 
 
-
 
NC_012856  Rpic12D_1445  3-isopropylmalate dehydratase, large subunit  67.02 
 
 
480 aa  649    Ralstonia pickettii 12D  Bacteria  normal  0.0303159  normal  0.651921 
 
 
-
 
NC_009656  PSPA7_2012  isopropylmalate isomerase large subunit  71.76 
 
 
474 aa  701    Pseudomonas aeruginosa PA7  Bacteria  normal  0.0300931  n/a   
 
 
-
 
NC_008543  Bcen2424_3949  isopropylmalate isomerase large subunit  95.52 
 
 
469 aa  924    Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.373197 
 
 
-
 
NC_008576  Mmc1_1779  3-isopropylmalate dehydratase, large subunit  70.6 
 
 
467 aa  673    Magnetococcus sp. MC-1  Bacteria  normal  hitchhiker  0.00189563 
 
 
-
 
NC_011662  Tmz1t_3071  isopropylmalate isomerase large subunit  72.44 
 
 
468 aa  698    Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0775  isopropylmalate isomerase large subunit  71.4 
 
 
470 aa  681    Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3774  isopropylmalate isomerase large subunit  72.13 
 
 
477 aa  698    Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009505  BOV_1834  isopropylmalate isomerase large subunit  69.03 
 
 
469 aa  643    Brucella ovis ATCC 25840  Bacteria  normal  0.538456  n/a   
 
 
-
 
NC_010322  PputGB1_1516  isopropylmalate isomerase large subunit  72.13 
 
 
477 aa  698    Pseudomonas putida GB-1  Bacteria  normal  0.11161  normal 
 
 
-
 
NC_008740  Maqu_1565  isopropylmalate isomerase large subunit  73.4 
 
 
472 aa  717    Marinobacter aquaeolei VT8  Bacteria  normal  0.046679  n/a   
 
 
-
 
NC_008752  Aave_1223  isopropylmalate isomerase large subunit  74.58 
 
 
473 aa  719    Acidovorax citrulli AAC00-1  Bacteria  normal  0.10034  normal  0.0157674 
 
 
-
 
NC_007925  RPC_0227  isopropylmalate isomerase large subunit  69.33 
 
 
473 aa  633  1e-180  Rhodopseudomonas palustris BisB18  Bacteria  normal  hitchhiker  0.00400027 
 
 
-
 
NC_007951  Bxe_A2732  isopropylmalate isomerase large subunit  66.24 
 
 
477 aa  634  1e-180  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0458261 
 
 
-
 
NC_007964  Nham_3584  isopropylmalate isomerase large subunit  68.9 
 
 
468 aa  629  1e-179  Nitrobacter hamburgensis X14  Bacteria  normal  0.931395  n/a   
 
 
-
 
NC_011894  Mnod_1416  isopropylmalate isomerase large subunit  68.53 
 
 
470 aa  629  1e-179  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.941586  n/a   
 
 
-
 
NC_009485  BBta_0363  isopropylmalate isomerase large subunit  67.82 
 
 
468 aa  628  1e-179  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.271446  normal  0.532793 
 
 
-
 
NC_008254  Meso_3448  isopropylmalate isomerase large subunit  67.53 
 
 
469 aa  628  1e-179  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_4223  isopropylmalate isomerase large subunit  67.96 
 
 
469 aa  627  1e-178  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0947  isopropylmalate isomerase large subunit  67.1 
 
 
469 aa  626  1e-178  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0819  isopropylmalate isomerase large subunit  68.1 
 
 
470 aa  625  1e-178  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_3280  isopropylmalate isomerase large subunit  66.6 
 
 
467 aa  627  1e-178  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.215534  normal 
 
 
-
 
NC_011757  Mchl_4757  isopropylmalate isomerase large subunit  66.81 
 
 
469 aa  618  1e-176  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_4084  isopropylmalate isomerase large subunit  66.88 
 
 
469 aa  618  1e-176  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.774814  normal 
 
 
-
 
NC_010172  Mext_4355  isopropylmalate isomerase large subunit  66.81 
 
 
480 aa  618  1e-176  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_2103  3-isopropylmalate dehydratase, large subunit  67.02 
 
 
470 aa  615  1e-175  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.0775087  normal 
 
 
-
 
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