More than 300 homologs were found in PanDaTox collection
for query gene BLD_0042 on replicon NC_010816
Organism: Bifidobacterium longum DJO10A



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010816  BLD_0042  response regulator  100 
 
 
240 aa  486  1e-136  Bifidobacterium longum DJO10A  Bacteria  normal  0.382747  n/a   
 
 
-
 
NC_013169  Ksed_08590  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  54.62 
 
 
239 aa  254  6e-67  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.857083 
 
 
-
 
NC_009664  Krad_3815  two component transcriptional regulator, winged helix family  55.84 
 
 
225 aa  253  2.0000000000000002e-66  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0278114  normal  0.0118387 
 
 
-
 
NC_011886  Achl_2443  two component transcriptional regulator, winged helix family  53.22 
 
 
224 aa  252  4.0000000000000004e-66  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00121019 
 
 
-
 
NC_008541  Arth_2712  two component transcriptional regulator  54.08 
 
 
224 aa  251  9.000000000000001e-66  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00552555  n/a   
 
 
-
 
NC_013530  Xcel_2514  two component transcriptional regulator, winged helix family  55.27 
 
 
226 aa  251  1e-65  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.24701  n/a   
 
 
-
 
NC_013521  Sked_09340  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  56.03 
 
 
223 aa  248  7e-65  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.217912  normal  0.763127 
 
 
-
 
NC_013174  Jden_1827  two component transcriptional regulator, winged helix family  55.17 
 
 
227 aa  245  4.9999999999999997e-64  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0904  two component transcriptional regulator  53.65 
 
 
229 aa  244  6.999999999999999e-64  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0335314 
 
 
-
 
NC_012669  Bcav_1240  two component transcriptional regulator, winged helix family  54.01 
 
 
227 aa  243  1.9999999999999999e-63  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_009380  Strop_0967  response regulator receiver  53.65 
 
 
229 aa  243  1.9999999999999999e-63  Salinispora tropica CNB-440  Bacteria  normal  0.359698  normal  0.873584 
 
 
-
 
NC_007333  Tfu_2496  response regulator receiver  54.24 
 
 
225 aa  242  5e-63  Thermobifida fusca YX  Bacteria  normal  0.491467  n/a   
 
 
-
 
NC_013172  Bfae_20650  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  51.93 
 
 
231 aa  241  7e-63  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0260682  n/a   
 
 
-
 
NC_012803  Mlut_14770  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  55.32 
 
 
226 aa  240  2e-62  Micrococcus luteus NCTC 2665  Bacteria  normal  0.383411  n/a   
 
 
-
 
NC_013510  Tcur_4043  two component transcriptional regulator, winged helix family  53.88 
 
 
225 aa  238  5e-62  Thermomonospora curvata DSM 43183  Bacteria  normal  0.728877  n/a   
 
 
-
 
NC_013093  Amir_6310  two component transcriptional regulator, winged helix family  52.3 
 
 
261 aa  238  6.999999999999999e-62  Actinosynnema mirum DSM 43827  Bacteria  normal  0.534044  n/a   
 
 
-
 
NC_013757  Gobs_4285  two component transcriptional regulator, winged helix family  52.34 
 
 
238 aa  235  6e-61  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.83647  n/a   
 
 
-
 
NC_008578  Acel_1765  two component transcriptional regulator  54.31 
 
 
225 aa  226  3e-58  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7594  two component transcriptional regulator, winged helix family  55.6 
 
 
228 aa  226  3e-58  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0426147 
 
 
-
 
NC_014210  Ndas_3745  two component transcriptional regulator, winged helix family  53.45 
 
 
225 aa  224  8e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.5489  normal 
 
 
-
 
NC_013947  Snas_1849  two component transcriptional regulator, winged helix family  53.22 
 
 
229 aa  224  9e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2332  two component transcriptional regulator, winged helix family  53.02 
 
 
227 aa  223  2e-57  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0100882  decreased coverage  0.00000063533 
 
 
-
 
NC_013159  Svir_30940  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  53.16 
 
 
225 aa  223  3e-57  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1412  response regulator receiver protein  53.88 
 
 
225 aa  223  3e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.285013  normal  0.0125199 
 
 
-
 
NC_014165  Tbis_0770  winged helix family two component transcriptional regulator  53.88 
 
 
225 aa  222  4e-57  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.10066 
 
 
-
 
NC_008699  Noca_1433  response regulator receiver  53.19 
 
 
248 aa  222  4.9999999999999996e-57  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_4249  two component transcriptional regulator, winged helix family  52.36 
 
 
225 aa  221  8e-57  Nakamurella multipartita DSM 44233  Bacteria  normal  0.316157  normal 
 
 
-
 
NC_013441  Gbro_3637  response regulator receiver  49.78 
 
 
225 aa  219  3e-56  Gordonia bronchialis DSM 43247  Bacteria  normal  0.135674  n/a   
 
 
-
 
NC_014158  Tpau_1076  two component transcriptional regulator, winged helix family  51.95 
 
 
228 aa  218  6e-56  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_1347  two component transcriptional regulator  48.94 
 
 
228 aa  218  8.999999999999998e-56  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1365  two component transcriptional regulator  48.94 
 
 
228 aa  218  8.999999999999998e-56  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1381  two component transcriptional regulator  48.94 
 
 
228 aa  218  8.999999999999998e-56  Mycobacterium sp. JLS  Bacteria  normal  normal  0.497022 
 
 
-
 
NC_008726  Mvan_1752  two component transcriptional regulator  48.94 
 
 
228 aa  216  2.9999999999999998e-55  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.581522 
 
 
-
 
NC_009338  Mflv_4712  two component transcriptional regulator  48.51 
 
 
228 aa  215  4e-55  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.541483  normal  0.0134498 
 
 
-
 
NC_008527  LACR_0444  DNA-binding response regulator  47.93 
 
 
233 aa  214  9e-55  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_13275  two component system sensor transduction transcriptional regulatory protein mtrA  47.66 
 
 
228 aa  213  1.9999999999999998e-54  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.656178 
 
 
-
 
NC_010184  BcerKBAB4_5259  two component transcriptional regulator  47.26 
 
 
235 aa  213  1.9999999999999998e-54  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000559572  n/a   
 
 
-
 
NC_003909  BCE_5615  DNA-binding response regulator YycF  47.26 
 
 
235 aa  213  2.9999999999999995e-54  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5319  DNA-binding response regulator YycF  47.26 
 
 
235 aa  213  2.9999999999999995e-54  Bacillus anthracis str. Sterne  Bacteria  normal  0.169223  n/a   
 
 
-
 
NC_005957  BT9727_5147  response regulator  47.26 
 
 
235 aa  213  2.9999999999999995e-54  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00168683  n/a   
 
 
-
 
NC_006274  BCZK5163  response regulator  47.26 
 
 
235 aa  213  2.9999999999999995e-54  Bacillus cereus E33L  Bacteria  hitchhiker  0.00196509  n/a   
 
 
-
 
NC_011773  BCAH820_5572  DNA-binding response regulator YycF  47.26 
 
 
235 aa  213  2.9999999999999995e-54  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.81316e-29 
 
 
-
 
NC_007530  GBAA_5715  DNA-binding response regulator YycF  47.26 
 
 
235 aa  213  2.9999999999999995e-54  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.656882  n/a   
 
 
-
 
NC_011658  BCAH187_A5650  DNA-binding response regulator YycF  47.26 
 
 
235 aa  213  2.9999999999999995e-54  Bacillus cereus AH187  Bacteria  hitchhiker  0.00563499  n/a   
 
 
-
 
NC_011725  BCB4264_A5589  DNA-binding response regulator YycF  47.26 
 
 
235 aa  212  2.9999999999999995e-54  Bacillus cereus B4264  Bacteria  normal  0.0469644  n/a   
 
 
-
 
NC_009674  Bcer98_4006  two component transcriptional regulator  47.26 
 
 
235 aa  212  4.9999999999999996e-54  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.010356  n/a   
 
 
-
 
NC_011772  BCG9842_B5346  DNA-binding response regulator YycF  46.84 
 
 
235 aa  211  5.999999999999999e-54  Bacillus cereus G9842  Bacteria  hitchhiker  0.000000234523  hitchhiker  0.00000000000323141 
 
 
-
 
NC_009513  Lreu_0019  two component transcriptional regulator  46.41 
 
 
235 aa  211  7.999999999999999e-54  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8215  two component transcriptional regulator, winged helix family  49.79 
 
 
226 aa  210  1e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008532  STER_1116  DNA-binding response regulator  46.78 
 
 
235 aa  210  1e-53  Streptococcus thermophilus LMD-9  Bacteria  normal  0.310768  n/a   
 
 
-
 
NC_008531  LEUM_1950  DNA-binding response regulator  44.17 
 
 
235 aa  207  1e-52  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.100456  n/a   
 
 
-
 
NC_008148  Rxyl_2983  two component transcriptional regulator  49.14 
 
 
228 aa  206  2e-52  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008528  OEOE_0105  DNA-binding response regulator  44.17 
 
 
237 aa  206  3e-52  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3538  two component transcriptional regulator, winged helix family  44.3 
 
 
237 aa  205  4e-52  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  45.53 
 
 
226 aa  204  7e-52  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_007333  Tfu_2910  response regulator receiver  45.96 
 
 
230 aa  203  2e-51  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0421  two component transcriptional regulator  46.32 
 
 
245 aa  202  5e-51  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0518956  normal 
 
 
-
 
NC_010424  Daud_1419  two component transcriptional regulator  44.54 
 
 
231 aa  201  7e-51  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0720218  n/a   
 
 
-
 
NC_012793  GWCH70_3409  two component transcriptional regulator, winged helix family  44.3 
 
 
236 aa  201  8e-51  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG0719  DNA-binding response regulator  44.44 
 
 
236 aa  201  8e-51  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.0951718  n/a   
 
 
-
 
NC_013131  Caci_0793  two component transcriptional regulator, winged helix family  45.8 
 
 
225 aa  201  9e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_2333  two component transcriptional regulator  44.44 
 
 
232 aa  200  9.999999999999999e-51  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4322  two component transcriptional regulator, winged helix family  45.96 
 
 
231 aa  200  9.999999999999999e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_0088  two component transcriptional regulator  45.11 
 
 
228 aa  199  1.9999999999999998e-50  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0499  winged helix family two component transcriptional regulator  44.77 
 
 
229 aa  199  3.9999999999999996e-50  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4619  two component transcriptional regulator  45.89 
 
 
245 aa  199  5e-50  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0926269 
 
 
-
 
NC_014248  Aazo_0581  winged helix family two component transcriptional regulator  47.86 
 
 
242 aa  198  6e-50  'Nostoc azollae' 0708  Bacteria  normal  0.296955  n/a   
 
 
-
 
NC_002936  DET0135  DNA-binding response regulator  45.69 
 
 
230 aa  198  7.999999999999999e-50  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1832  two component transcriptional regulator  45.69 
 
 
245 aa  197  9e-50  Acidothermus cellulolyticus 11B  Bacteria  normal  0.366424  normal  0.561636 
 
 
-
 
NC_009012  Cthe_1288  two component transcriptional regulator  40.52 
 
 
228 aa  197  1.0000000000000001e-49  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000000128008  n/a   
 
 
-
 
NC_013174  Jden_2083  two component transcriptional regulator, winged helix family  43.4 
 
 
237 aa  197  1.0000000000000001e-49  Jonesia denitrificans DSM 20603  Bacteria  normal  0.873655  normal 
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  44.54 
 
 
239 aa  197  2.0000000000000003e-49  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_011831  Cagg_1100  two component transcriptional regulator, winged helix family  43.7 
 
 
236 aa  196  2.0000000000000003e-49  Chloroflexus aggregans DSM 9485  Bacteria  normal  unclonable  0.0000000182155 
 
 
-
 
NC_013093  Amir_3871  two component transcriptional regulator, winged helix family  44.64 
 
 
227 aa  197  2.0000000000000003e-49  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.0000000473157  n/a   
 
 
-
 
NC_008346  Swol_0951  response regulator receiver protein  43.7 
 
 
239 aa  196  2.0000000000000003e-49  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.0000000111905  n/a   
 
 
-
 
NC_013441  Gbro_0997  response regulator receiver  42.13 
 
 
228 aa  197  2.0000000000000003e-49  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0700  two component transcriptional regulator, winged helix family  45.96 
 
 
226 aa  196  2.0000000000000003e-49  Thermomonospora curvata DSM 43183  Bacteria  normal  0.768939  n/a   
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  44.54 
 
 
239 aa  197  2.0000000000000003e-49  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_011729  PCC7424_4207  two component transcriptional regulator, winged helix family  47.01 
 
 
247 aa  196  3e-49  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_0961  response regulator receiver protein  44.58 
 
 
229 aa  196  3e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  44.54 
 
 
232 aa  196  3e-49  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_1878  two component transcriptional regulator  47.44 
 
 
242 aa  196  4.0000000000000005e-49  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.559477 
 
 
-
 
NC_012034  Athe_0080  two component transcriptional regulator, winged helix family  44.68 
 
 
230 aa  196  4.0000000000000005e-49  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3818  two component transcriptional regulator  45.19 
 
 
230 aa  195  5.000000000000001e-49  Roseiflexus sp. RS-1  Bacteria  normal  0.386967  normal  0.165932 
 
 
-
 
NC_002976  SERP2534  DNA-binding response regulator YycF  43.78 
 
 
233 aa  195  6e-49  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0997  two component transcriptional regulator  44.54 
 
 
230 aa  194  8.000000000000001e-49  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.679101  normal 
 
 
-
 
NC_014158  Tpau_0654  two component transcriptional regulator, winged helix family  42.98 
 
 
229 aa  194  9e-49  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.200991  n/a   
 
 
-
 
NC_009455  DehaBAV1_0235  two component transcriptional regulator  44.83 
 
 
230 aa  194  1e-48  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2168  two component transcriptional regulator, winged helix family  43.53 
 
 
247 aa  194  1e-48  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.222815 
 
 
-
 
NC_011898  Ccel_3394  two component transcriptional regulator, winged helix family  44.83 
 
 
230 aa  194  1e-48  Clostridium cellulolyticum H10  Bacteria  normal  0.103692  n/a   
 
 
-
 
NC_013169  Ksed_03700  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  44.96 
 
 
226 aa  194  1e-48  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.132847 
 
 
-
 
NC_009632  SaurJH1_0018  response regulator receiver  42.67 
 
 
233 aa  194  1e-48  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0018  two component transcriptional regulator  42.67 
 
 
233 aa  194  1e-48  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.70243  n/a   
 
 
-
 
NC_013124  Afer_0200  two component transcriptional regulator, winged helix family  44.68 
 
 
242 aa  194  1e-48  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0955644  n/a   
 
 
-
 
NC_009616  Tmel_1838  two component transcriptional regulator  43.28 
 
 
239 aa  193  2e-48  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00000194698  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  44.26 
 
 
229 aa  193  2e-48  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_013411  GYMC61_0785  two component transcriptional regulator, winged helix family  46.47 
 
 
235 aa  193  2e-48  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009972  Haur_4036  two component transcriptional regulator  44.12 
 
 
248 aa  193  2e-48  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_3302  two component transcriptional regulator, winged helix family  44.21 
 
 
231 aa  193  2e-48  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.000343135 
 
 
-
 
NC_007516  Syncc9605_2384  two component transcriptional regulator  44.68 
 
 
259 aa  192  3e-48  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
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