More than 300 homologs were found in PanDaTox collection
for query gene BBta_7116 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007778  RPB_1688  Acyl-CoA dehydrogenase-like  79.04 
 
 
415 aa  694    Rhodopseudomonas palustris HaA2  Bacteria  normal  0.78575  normal  0.535517 
 
 
-
 
NC_007778  RPB_1689  Acyl-CoA dehydrogenase-like  86.71 
 
 
415 aa  748    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.777163 
 
 
-
 
NC_009485  BBta_7116  putative acyl-CoA dehydrogenase  100 
 
 
415 aa  858    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2198  acyl-CoA dehydrogenase-like  77.54 
 
 
413 aa  675    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.659729  normal 
 
 
-
 
NC_011004  Rpal_1910  acyl-CoA dehydrogenase domain protein  87.68 
 
 
414 aa  753    Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3604  acyl-CoA dehydrogenase-like  84.78 
 
 
414 aa  729    Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0502899  normal 
 
 
-
 
NC_007958  RPD_3605  acyl-CoA dehydrogenase-like  78.8 
 
 
415 aa  696    Rhodopseudomonas palustris BisB5  Bacteria  normal  0.75816  normal 
 
 
-
 
NC_009485  BBta_7117  putative acyl-CoA dehydrogenase  80 
 
 
414 aa  702    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.691802 
 
 
-
 
NC_011004  Rpal_1909  acyl-CoA dehydrogenase domain protein  78.07 
 
 
415 aa  687    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.337795  n/a   
 
 
-
 
NC_009511  Swit_1604  acyl-CoA dehydrogenase domain-containing protein  62.47 
 
 
432 aa  551  1e-156  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_3426  acyl-CoA dehydrogenase domain-containing protein  54.74 
 
 
407 aa  463  1e-129  Caulobacter sp. K31  Bacteria  normal  0.751929  normal  0.216447 
 
 
-
 
NC_009719  Plav_0965  acyl-CoA dehydrogenase domain-containing protein  52.61 
 
 
409 aa  439  9.999999999999999e-123  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1032  acyl-CoA dehydrogenase domain-containing protein  52.62 
 
 
411 aa  428  1e-118  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.605452  normal 
 
 
-
 
NC_009511  Swit_3397  acyl-CoA dehydrogenase domain-containing protein  47.36 
 
 
403 aa  359  4e-98  Sphingomonas wittichii RW1  Bacteria  hitchhiker  0.00717177  decreased coverage  0.00584794 
 
 
-
 
NC_008048  Sala_1632  acyl-CoA dehydrogenase-like protein  45.89 
 
 
407 aa  336  3.9999999999999995e-91  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0101171  normal 
 
 
-
 
NC_008048  Sala_1636  acyl-CoA dehydrogenase-like protein  43.95 
 
 
401 aa  316  6e-85  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.552524 
 
 
-
 
NC_013739  Cwoe_0736  acyl-CoA dehydrogenase domain protein  41.47 
 
 
403 aa  310  2e-83  Conexibacter woesei DSM 14684  Bacteria  normal  0.453117  normal 
 
 
-
 
NC_008048  Sala_1246  acyl-CoA dehydrogenase-like protein  44.99 
 
 
384 aa  301  2e-80  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.235066  normal 
 
 
-
 
NC_013739  Cwoe_0960  acyl-CoA dehydrogenase domain protein  41.67 
 
 
378 aa  296  7e-79  Conexibacter woesei DSM 14684  Bacteria  normal  0.489478  normal 
 
 
-
 
NC_009380  Strop_2813  acyl-CoA dehydrogenase domain-containing protein  40 
 
 
380 aa  287  2e-76  Salinispora tropica CNB-440  Bacteria  normal  0.249465  normal 
 
 
-
 
NC_013510  Tcur_3342  acyl-CoA dehydrogenase domain protein  40.91 
 
 
393 aa  283  3.0000000000000004e-75  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_1367  acyl-CoA dehydrogenase domain protein  40.24 
 
 
400 aa  281  2e-74  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5569  acyl-CoA dehydrogenase domain-containing protein  43.6 
 
 
396 aa  280  2e-74  Mycobacterium sp. JLS  Bacteria  normal  0.313382  normal 
 
 
-
 
NC_008726  Mvan_0394  acyl-CoA dehydrogenase domain-containing protein  43.99 
 
 
398 aa  280  3e-74  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.254856  normal  0.326104 
 
 
-
 
NC_013595  Sros_6825  dehydrogenase family protein  39.31 
 
 
393 aa  278  1e-73  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.178037 
 
 
-
 
NC_008146  Mmcs_5188  acyl-CoA dehydrogenase-like protein  43.32 
 
 
396 aa  278  1e-73  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5277  acyl-CoA dehydrogenase domain-containing protein  43.32 
 
 
396 aa  278  1e-73  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0344  acyl-CoA dehydrogenase domain-containing protein  40.86 
 
 
394 aa  276  5e-73  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_1155  acyl-CoA dehydrogenase domain protein  46.86 
 
 
396 aa  273  4.0000000000000004e-72  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0803  acyl-CoA dehydrogenase domain-containing protein  38.73 
 
 
378 aa  273  6e-72  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7781  acyl-CoA dehydrogenase domain-containing protein  43.84 
 
 
395 aa  271  1e-71  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_2698  acyl-CoA dehydrogenase domain-containing protein  43.68 
 
 
390 aa  269  5.9999999999999995e-71  Thermobispora bispora DSM 43833  Bacteria  normal  0.96365  normal  0.79248 
 
 
-
 
NC_013510  Tcur_1475  acyl-CoA dehydrogenase domain protein  41.32 
 
 
397 aa  265  8.999999999999999e-70  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0513972  n/a   
 
 
-
 
NC_007333  Tfu_2309  putative acyl-CoA dehydrogenase  42.66 
 
 
411 aa  262  6.999999999999999e-69  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2706  acyl-CoA dehydrogenase domain protein  38.48 
 
 
383 aa  260  3e-68  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0953492  n/a   
 
 
-
 
NC_009077  Mjls_2574  acyl-CoA dehydrogenase domain-containing protein  37.75 
 
 
385 aa  259  5.0000000000000005e-68  Mycobacterium sp. JLS  Bacteria  normal  0.762648  normal 
 
 
-
 
NC_009921  Franean1_5572  acyl-CoA dehydrogenase domain-containing protein  44.32 
 
 
398 aa  257  2e-67  Frankia sp. EAN1pec  Bacteria  normal  0.98735  normal 
 
 
-
 
CP001800  Ssol_0320  acyl-CoA dehydrogenase domain protein  37.31 
 
 
370 aa  255  8e-67  Sulfolobus solfataricus 98/2  Archaea  normal  0.25734  n/a   
 
 
-
 
NC_009901  Spea_2176  acyl-CoA dehydrogenase domain-containing protein  36.88 
 
 
396 aa  254  3e-66  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2091  acyl-CoA dehydrogenase domain-containing protein  37.4 
 
 
381 aa  253  4.0000000000000004e-66  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_0875  acyl-CoA dehydrogenase-like protein  36.43 
 
 
383 aa  251  1e-65  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4096  acyl-CoA dehydrogenase domain-containing protein  34.65 
 
 
396 aa  251  2e-65  Mycobacterium sp. JLS  Bacteria  normal  0.0624184  normal 
 
 
-
 
NC_008699  Noca_4134  acyl-CoA dehydrogenase domain-containing protein  39.62 
 
 
413 aa  250  3e-65  Nocardioides sp. JS614  Bacteria  normal  0.355452  n/a   
 
 
-
 
NC_013159  Svir_16750  acyl-CoA dehydrogenase  41.69 
 
 
403 aa  249  5e-65  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.73205  normal 
 
 
-
 
NC_009953  Sare_2814  acyl-CoA dehydrogenase domain-containing protein  37.56 
 
 
386 aa  249  6e-65  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00382252 
 
 
-
 
NC_013159  Svir_17890  acyl-CoA dehydrogenase  39.94 
 
 
402 aa  246  8e-64  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0953451  normal  0.548212 
 
 
-
 
NC_009921  Franean1_2719  acyl-CoA dehydrogenase domain-containing protein  35.15 
 
 
429 aa  245  9e-64  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4064  acyl-CoA dehydrogenase domain-containing protein  37.28 
 
 
390 aa  244  9.999999999999999e-64  Mycobacterium sp. JLS  Bacteria  normal  normal  0.725849 
 
 
-
 
NC_013510  Tcur_3998  acyl-CoA dehydrogenase domain protein  37.44 
 
 
734 aa  244  1.9999999999999999e-63  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0183743  n/a   
 
 
-
 
NC_014158  Tpau_1861  acyl-CoA dehydrogenase domain protein  41.11 
 
 
395 aa  244  1.9999999999999999e-63  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
CP001800  Ssol_2123  acyl-CoA dehydrogenase domain protein  36.46 
 
 
363 aa  244  3e-63  Sulfolobus solfataricus 98/2  Archaea  unclonable  0.000012052  n/a   
 
 
-
 
NC_008726  Mvan_0403  acyl-CoA dehydrogenase domain-containing protein  39.09 
 
 
737 aa  243  3e-63  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I1078  acyl-CoA dehydrogenase domain-containing protein  37.07 
 
 
398 aa  244  3e-63  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0939  acyl-CoA dehydrogenase-like  35.95 
 
 
392 aa  242  9e-63  Frankia sp. CcI3  Bacteria  normal  0.0130462  normal  0.579337 
 
 
-
 
NC_009719  Plav_1060  acyl-CoA dehydrogenase domain-containing protein  34.48 
 
 
397 aa  241  2e-62  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.596056  normal 
 
 
-
 
NC_009077  Mjls_4137  acyl-CoA dehydrogenase domain-containing protein  38.64 
 
 
381 aa  241  2e-62  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_1307  acyl-CoA dehydrogenase  36.1 
 
 
398 aa  239  4e-62  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_1453  putative acyl-CoA dehydrogenase family protein  36.1 
 
 
398 aa  239  6.999999999999999e-62  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0720  acyl-CoA dehydrogenase domain-containing protein  36.1 
 
 
398 aa  239  6.999999999999999e-62  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1147  acyl-CoA dehydrogenase  36.1 
 
 
398 aa  239  6.999999999999999e-62  Burkholderia mallei SAVP1  Bacteria  normal  0.383138  n/a   
 
 
-
 
NC_009080  BMA10247_0430  acyl-CoA dehydrogenase  36.1 
 
 
398 aa  239  6.999999999999999e-62  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_2615  acyl-CoA dehydrogenase domain-containing protein  36.04 
 
 
386 aa  239  6.999999999999999e-62  Salinispora tropica CNB-440  Bacteria  normal  0.766837  normal 
 
 
-
 
NC_008699  Noca_2767  acyl-CoA dehydrogenase domain-containing protein  35.73 
 
 
378 aa  239  6.999999999999999e-62  Nocardioides sp. JS614  Bacteria  normal  0.259881  n/a   
 
 
-
 
NC_009076  BURPS1106A_1316  acyl-CoA dehydrogenase  36.1 
 
 
398 aa  239  6.999999999999999e-62  Burkholderia pseudomallei 1106a  Bacteria  normal  0.23333  n/a   
 
 
-
 
NC_009338  Mflv_1481  acyl-CoA dehydrogenase domain-containing protein  38.38 
 
 
382 aa  239  9e-62  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4613  acyl-CoA dehydrogenase domain protein  36.63 
 
 
394 aa  239  1e-61  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B1437  Acyl-CoA dehydrogenase  35.21 
 
 
389 aa  238  2e-61  Burkholderia sp. 383  Bacteria  normal  0.0732196  normal 
 
 
-
 
NC_013947  Snas_2909  acyl-CoA dehydrogenase domain-containing protein  40.37 
 
 
396 aa  237  2e-61  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.25619  normal  0.0238889 
 
 
-
 
NC_009719  Plav_1805  acyl-CoA dehydrogenase domain-containing protein  35.92 
 
 
397 aa  237  3e-61  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.337752  normal 
 
 
-
 
NC_007347  Reut_A1563  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  35.77 
 
 
388 aa  236  4e-61  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A5560  Acyl-CoA dehydrogenase  35.45 
 
 
398 aa  236  4e-61  Burkholderia sp. 383  Bacteria  normal  normal  0.198235 
 
 
-
 
NC_008726  Mvan_4006  acyl-CoA dehydrogenase domain-containing protein  34.91 
 
 
419 aa  236  5.0000000000000005e-61  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1749  Acyl-CoA dehydrogenase-like  35.22 
 
 
396 aa  236  6e-61  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0172136 
 
 
-
 
NC_009921  Franean1_2922  acyl-CoA dehydrogenase domain-containing protein  34.98 
 
 
416 aa  236  7e-61  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_1045  acyl-CoA dehydrogenase domain-containing protein  35.28 
 
 
398 aa  235  8e-61  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0868009  normal  0.228879 
 
 
-
 
NC_008146  Mmcs_0366  acyl-CoA dehydrogenase-like protein  40.12 
 
 
730 aa  235  1.0000000000000001e-60  Mycobacterium sp. MCS  Bacteria  normal  0.235849  n/a   
 
 
-
 
NC_009077  Mjls_0355  acyl-CoA dehydrogenase domain-containing protein  40.12 
 
 
730 aa  235  1.0000000000000001e-60  Mycobacterium sp. JLS  Bacteria  normal  0.353074  normal 
 
 
-
 
NC_010508  Bcenmc03_2256  acyl-CoA dehydrogenase domain-containing protein  35.28 
 
 
398 aa  235  1.0000000000000001e-60  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_0376  acyl-CoA dehydrogenase domain-containing protein  40.12 
 
 
730 aa  235  1.0000000000000001e-60  Mycobacterium sp. KMS  Bacteria  normal  0.262889  normal 
 
 
-
 
NC_009565  TBFG_10275  acyl-CoA dehydrogenase fadE6  39.53 
 
 
731 aa  235  1.0000000000000001e-60  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.0482205 
 
 
-
 
NC_009719  Plav_1807  acyl-CoA dehydrogenase domain-containing protein  34.29 
 
 
399 aa  234  3e-60  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.167167  normal 
 
 
-
 
NC_007951  Bxe_A3192  putative pimeloyl-CoA dehydrogenase (large subunit), PimC-like  34.79 
 
 
398 aa  233  3e-60  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_1620  acyl-CoA dehydrogenase-like  35.04 
 
 
398 aa  234  3e-60  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2232  acyl-CoA dehydrogenase domain-containing protein  35.04 
 
 
398 aa  234  3e-60  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1625  acyl-CoA dehydrogenase domain-containing protein  35.71 
 
 
422 aa  233  4.0000000000000004e-60  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5603  acyl-CoA dehydrogenase domain-containing protein  34.43 
 
 
462 aa  233  6e-60  Frankia sp. EAN1pec  Bacteria  normal  0.447806  hitchhiker  0.00691492 
 
 
-
 
NC_009511  Swit_3633  acyl-CoA dehydrogenase domain-containing protein  36.63 
 
 
393 aa  232  8.000000000000001e-60  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.752817 
 
 
-
 
NC_010682  Rpic_2197  acyl-CoA dehydrogenase domain protein  34.06 
 
 
398 aa  231  1e-59  Ralstonia pickettii 12J  Bacteria  normal  normal  0.34264 
 
 
-
 
NC_009565  TBFG_11963  acyl-CoA dehydrogenase fadE17  35.11 
 
 
409 aa  232  1e-59  Mycobacterium tuberculosis F11  Bacteria  normal  0.0444584  normal  0.860383 
 
 
-
 
NC_010551  BamMC406_2149  acyl-CoA dehydrogenase domain-containing protein  34.63 
 
 
398 aa  232  1e-59  Burkholderia ambifaria MC40-6  Bacteria  normal  0.324611  normal  0.360268 
 
 
-
 
NC_013510  Tcur_2177  acyl-CoA dehydrogenase domain protein  38.29 
 
 
732 aa  231  1e-59  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.00000163847  n/a   
 
 
-
 
NC_014158  Tpau_3835  acyl-CoA dehydrogenase domain protein  35.61 
 
 
382 aa  232  1e-59  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_1362  acyl-CoA dehydrogenase domain protein  34.79 
 
 
398 aa  231  2e-59  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0703001  decreased coverage  0.000728046 
 
 
-
 
NC_011004  Rpal_4235  pimeloyl-CoA dehydrogenase, large subunit  34.24 
 
 
396 aa  231  2e-59  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0801  acyl-CoA dehydrogenase domain-containing protein  37.29 
 
 
736 aa  231  2e-59  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0335  acyl-CoA dehydrogenase domain-containing protein  38.38 
 
 
728 aa  231  2e-59  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1874  acyl-CoA dehydrogenase domain protein  33.74 
 
 
398 aa  231  3e-59  Ralstonia pickettii 12D  Bacteria  normal  normal  0.400233 
 
 
-
 
NC_009565  TBFG_13593  acyl-CoA dehydrogenase fadE30  35.81 
 
 
385 aa  230  3e-59  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.000404245  normal  0.123125 
 
 
-
 
NC_009485  BBta_7071  putative pimeloyl-CoA dehydrogenase pimC (large subunit)  34.48 
 
 
396 aa  230  3e-59  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_2270  acyl-CoA dehydrogenase domain-containing protein  34.39 
 
 
398 aa  231  3e-59  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
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